Wall clock time and date at job start Sat Mar 6 2021 23:53:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86300 * 109.47253 * 2 1 4 4 C 1.50700 * 109.47035 * 120.00293 * 2 1 3 5 5 C 1.34832 * 125.65683 * 64.99755 * 4 2 1 6 6 C 1.40796 * 107.05063 * 179.97438 * 5 4 2 7 7 C 1.36100 * 106.73561 * 0.02562 * 6 5 4 8 8 C 1.47566 * 125.94833 * 179.97438 * 7 6 5 9 9 C 1.39926 * 119.95211 * 0.02562 * 8 7 6 10 10 C 1.36429 * 120.27554 * 179.69275 * 9 8 7 11 11 C 1.39872 * 120.18490 * 0.56474 * 10 9 8 12 12 C 1.47296 * 120.04421 * 179.71134 * 11 10 9 13 13 O 1.21626 * 120.00097 * 179.72532 * 12 11 10 14 14 N 1.34776 * 120.00168 * 359.73123 * 12 11 10 15 15 C 1.46496 * 120.00390 * 180.02562 * 14 12 11 16 16 H 1.09004 * 109.47374 * 34.99626 * 15 14 12 17 17 C 1.53000 * 109.47631 * 154.99604 * 15 14 12 18 18 C 1.52997 * 109.47060 * 59.99933 * 17 15 14 19 19 C 1.52999 * 109.47317 * 59.99960 * 18 17 15 20 20 H 1.09002 * 109.46716 * 60.00091 * 19 18 17 21 21 O 1.42900 * 109.47616 * 179.97438 * 19 18 17 22 22 C 1.53005 * 109.47159 * 300.00546 * 19 18 17 23 23 C 1.52997 * 109.47452 * 59.99536 * 22 19 18 24 24 C 1.40400 * 119.91190 * 359.44052 * 11 10 9 25 25 O 1.35676 * 120.14183 * 180.25094 * 24 11 10 26 26 C 1.38280 * 119.72285 * 0.27216 * 24 11 10 27 27 O 1.34240 * 125.65057 * 245.30314 * 4 2 1 28 28 H 0.96699 * 114.00059 * 59.99883 * 1 2 3 29 29 H 1.09004 * 109.46709 * 239.99706 * 2 1 3 30 30 H 1.48504 * 109.99999 * 60.00129 * 3 2 1 31 31 H 1.48496 * 109.99760 * 181.32146 * 3 2 1 32 32 H 1.08000 * 126.47499 * 0.03726 * 5 4 2 33 33 H 1.08000 * 126.63135 * 179.97438 * 6 5 4 34 34 H 1.07999 * 119.86537 * 359.97438 * 9 8 7 35 35 H 1.08004 * 119.90639 * 180.30613 * 10 9 8 36 36 H 0.97001 * 120.00215 * 359.97438 * 14 12 11 37 37 H 1.09002 * 109.47398 * 180.02562 * 17 15 14 38 38 H 1.09001 * 109.47194 * 300.00282 * 17 15 14 39 39 H 1.08996 * 109.47853 * 180.02562 * 18 17 15 40 40 H 1.09002 * 109.47153 * 300.00319 * 18 17 15 41 41 H 0.96700 * 113.99696 * 300.00309 * 21 19 18 42 42 H 1.09002 * 109.46935 * 299.99411 * 22 19 18 43 43 H 1.09001 * 109.46812 * 179.97438 * 22 19 18 44 44 H 1.08993 * 109.47194 * 179.97438 * 23 22 19 45 45 H 1.09002 * 109.46695 * 59.99734 * 23 22 19 46 46 H 0.96698 * 113.99644 * 89.99662 * 25 24 11 47 47 H 1.08004 * 120.09493 * 180.02562 * 26 24 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.7568 -2.0180 1.5093 6 6 2.3811 -2.2630 2.7473 7 6 2.9081 -1.0786 3.1617 8 6 3.6571 -0.8542 4.4131 9 6 3.8785 -1.9178 5.2950 10 6 4.5756 -1.7192 6.4509 11 6 5.0638 -0.4474 6.7680 12 6 5.8105 -0.2351 8.0198 13 8 6.2390 0.8700 8.2924 14 7 6.0190 -1.2655 8.8631 15 6 6.7611 -1.0543 10.1084 16 1 6.5374 -0.0624 10.5010 17 6 6.3496 -2.1132 11.1334 18 6 6.6637 -3.5055 10.5824 19 6 8.1645 -3.6184 10.3070 20 1 8.7167 -3.4612 11.2336 21 8 8.4580 -4.9191 9.7930 22 6 8.5761 -2.5595 9.2821 23 6 8.2620 -1.1672 9.8331 24 6 4.8462 0.6254 5.8888 25 8 5.3221 1.8599 6.1893 26 6 4.1443 0.4186 4.7155 27 8 2.6218 -0.1451 2.2333 28 1 -0.3933 0.4417 -0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 1.5616 2.4679 1.2085 31 1 3.5346 1.7702 -0.0322 32 1 1.2372 -2.7411 0.8981 33 1 2.4312 -3.2079 3.2679 34 1 3.5000 -2.9010 5.0576 35 1 4.7473 -2.5454 7.1249 36 1 5.6770 -2.1469 8.6460 37 1 6.9015 -1.9557 12.0601 38 1 5.2804 -2.0328 11.3295 39 1 6.3702 -4.2599 11.3123 40 1 6.1115 -3.6627 9.6558 41 1 8.2227 -5.6409 10.3918 42 1 8.0238 -2.7167 8.3556 43 1 9.6453 -2.6397 9.0863 44 1 8.5556 -0.4129 9.1032 45 1 8.8142 -1.0101 10.7597 46 1 6.2150 2.0284 5.8586 47 1 3.9737 1.2395 4.0346 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_12807986.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:53:57 Heat of formation + Delta-G solvation = -115.972454 kcal Electronic energy + Delta-G solvation = -31937.701296 eV Core-core repulsion = 27439.754925 eV Total energy + Delta-G solvation = -4497.946371 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -43.89327 -41.85745 -40.58225 -39.18965 -38.13033 -37.84304 -36.94424 -34.61409 -34.25255 -33.24278 -31.91420 -31.48798 -30.77223 -29.60753 -27.06518 -24.69428 -24.18279 -23.80267 -23.27762 -22.62164 -22.18867 -21.48045 -20.28928 -19.82163 -18.98517 -18.70230 -18.23010 -18.12982 -17.37457 -17.20404 -16.78732 -16.65656 -16.41981 -16.24393 -15.93036 -15.86848 -15.56404 -15.20471 -14.93033 -14.68031 -14.50875 -14.35612 -14.22283 -14.11953 -14.02374 -13.84848 -13.69047 -13.61222 -13.32871 -12.93104 -12.85478 -12.74587 -12.27730 -12.22246 -12.19611 -12.03070 -11.71099 -11.29138 -11.26251 -11.00362 -10.81736 -10.76240 -10.46909 -10.16456 -10.08580 -9.13910 -5.15701 -0.92416 -0.00008 0.50074 1.11107 1.28883 1.47791 1.57896 1.82757 1.95637 1.99919 2.51991 2.87991 3.17340 3.23350 3.45376 3.51001 3.64562 3.68299 3.68662 3.70106 3.86371 3.87732 4.01293 4.07218 4.09068 4.13450 4.24068 4.32485 4.35299 4.40932 4.44976 4.51151 4.55815 4.59508 4.67531 4.77251 4.84957 4.91730 4.94915 4.99875 5.03059 5.07112 5.08237 5.11592 5.22866 5.30130 5.32548 5.39846 5.45147 5.83656 6.40038 6.56175 6.80545 6.89405 7.09943 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.035 4.035 3 Si 0.800 3.200 4 C -0.030 4.030 5 C -0.174 4.174 6 C -0.166 4.166 7 C -0.005 4.005 8 C 0.023 3.977 9 C -0.106 4.106 10 C -0.049 4.049 11 C -0.177 4.177 12 C 0.557 3.443 13 O -0.561 6.561 14 N -0.705 5.705 15 C 0.143 3.857 16 H 0.075 0.925 17 C -0.119 4.119 18 C -0.148 4.148 19 C 0.104 3.896 20 H 0.063 0.937 21 O -0.588 6.588 22 C -0.110 4.110 23 C -0.123 4.123 24 C 0.162 3.838 25 O -0.494 6.494 26 C -0.160 4.160 27 O -0.198 6.198 28 H 0.414 0.586 29 H 0.130 0.870 30 H -0.312 1.312 31 H -0.295 1.295 32 H 0.178 0.822 33 H 0.190 0.810 34 H 0.174 0.826 35 H 0.172 0.828 36 H 0.410 0.590 37 H 0.094 0.906 38 H 0.082 0.918 39 H 0.088 0.912 40 H 0.071 0.929 41 H 0.395 0.605 42 H 0.062 0.938 43 H 0.059 0.941 44 H 0.052 0.948 45 H 0.087 0.913 46 H 0.408 0.592 47 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.866 -7.191 -2.538 7.851 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.145 4.145 3 Si 0.707 3.293 4 C -0.080 4.080 5 C -0.193 4.193 6 C -0.185 4.185 7 C -0.054 4.054 8 C 0.023 3.977 9 C -0.124 4.124 10 C -0.068 4.068 11 C -0.181 4.181 12 C 0.345 3.655 13 O -0.440 6.440 14 N -0.359 5.359 15 C 0.038 3.962 16 H 0.093 0.907 17 C -0.157 4.157 18 C -0.185 4.185 19 C 0.046 3.954 20 H 0.081 0.919 21 O -0.397 6.397 22 C -0.148 4.148 23 C -0.162 4.162 24 C 0.116 3.884 25 O -0.307 6.307 26 C -0.179 4.179 27 O -0.097 6.097 28 H 0.267 0.733 29 H 0.148 0.852 30 H -0.241 1.241 31 H -0.223 1.223 32 H 0.195 0.805 33 H 0.207 0.793 34 H 0.191 0.809 35 H 0.189 0.811 36 H 0.249 0.751 37 H 0.112 0.888 38 H 0.100 0.900 39 H 0.107 0.893 40 H 0.090 0.910 41 H 0.245 0.755 42 H 0.080 0.920 43 H 0.078 0.922 44 H 0.071 0.929 45 H 0.106 0.894 46 H 0.268 0.732 47 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -1.231 -5.404 -1.583 5.764 hybrid contribution 0.258 -0.613 0.290 0.726 sum -0.973 -6.018 -1.293 6.231 Atomic orbital electron populations 1.86414 1.16021 1.82510 1.52178 1.23911 0.86531 1.11228 0.92798 0.94471 0.76949 0.74243 0.83639 1.22242 1.00487 0.93755 0.91481 1.21911 1.03406 0.95626 0.98359 1.22325 1.00245 0.98827 0.97084 1.20719 1.05244 0.88113 0.91307 1.17992 0.95392 0.93997 0.90354 1.21067 0.99150 0.99312 0.92865 1.21176 0.93794 0.95150 0.96647 1.20565 1.05366 0.95109 0.97043 1.18149 0.79257 0.84436 0.83685 1.90816 1.52012 1.25252 1.75956 1.45935 1.56581 1.11978 1.21403 1.21037 0.90861 1.00285 0.83973 0.90724 1.21772 1.03089 0.92860 0.97981 1.22250 0.96169 0.97685 1.02436 1.21832 0.94811 0.82732 0.96073 0.91875 1.86491 1.87307 1.16430 1.49478 1.21407 1.01443 0.93187 0.98757 1.21826 0.95849 0.96222 1.02273 1.18433 0.94565 0.84333 0.91081 1.84723 1.37322 1.28477 1.80196 1.21503 1.01745 0.97524 0.97130 1.83958 1.59044 1.39228 1.27422 0.73281 0.85225 1.24096 1.22301 0.80481 0.79254 0.80882 0.81065 0.75118 0.88769 0.89983 0.89296 0.91028 0.75544 0.91953 0.92209 0.92902 0.89436 0.73161 0.85749 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.85 12.86 -148.98 -1.92 -1.07 16 2 C -0.03 0.03 2.97 71.24 0.21 0.24 16 3 Si 0.80 0.10 32.11 68.60 2.20 2.31 16 4 C -0.03 -0.19 6.24 24.90 0.16 -0.04 16 5 C -0.17 -0.56 10.78 22.11 0.24 -0.32 16 6 C -0.17 -0.35 10.25 22.40 0.23 -0.12 16 7 C -0.01 -0.04 7.02 24.24 0.17 0.13 16 8 C 0.02 0.12 5.87 -20.08 -0.12 0.00 16 9 C -0.11 0.17 9.48 22.26 0.21 0.39 16 10 C -0.05 0.11 9.47 22.24 0.21 0.32 16 11 C -0.18 -0.92 5.89 -19.97 -0.12 -1.03 16 12 C 0.56 4.02 7.72 86.63 0.67 4.69 16 13 O -0.56 -8.62 14.80 16.88 0.25 -8.37 16 14 N -0.71 0.14 4.18 -445.92 -1.86 -1.73 16 15 C 0.14 -0.08 2.78 44.99 0.13 0.04 16 16 H 0.07 0.29 7.58 -2.39 -0.02 0.28 16 17 C -0.12 0.75 5.61 30.59 0.17 0.93 16 18 C -0.15 1.12 5.37 30.59 0.16 1.28 16 19 C 0.10 -0.38 3.47 30.60 0.11 -0.28 16 20 H 0.06 -0.30 8.14 -2.39 -0.02 -0.32 16 21 O -0.59 0.79 13.32 -148.98 -1.98 -1.20 16 22 C -0.11 0.03 5.42 30.60 0.17 0.19 16 23 C -0.12 -0.02 5.60 30.59 0.17 0.15 16 24 C 0.16 1.46 6.71 22.81 0.15 1.61 16 25 O -0.49 -5.49 11.56 -68.94 -0.80 -6.29 16 26 C -0.16 -1.38 9.65 22.61 0.22 -1.16 16 27 O -0.20 -2.15 8.79 -6.10 -0.05 -2.20 16 28 H 0.41 -5.43 8.74 -74.06 -0.65 -6.08 16 29 H 0.13 -0.99 7.96 -2.38 -0.02 -1.01 16 30 H -0.31 -3.33 7.11 99.48 0.71 -2.62 16 31 H -0.30 -2.05 7.11 99.48 0.71 -1.35 16 32 H 0.18 -0.29 8.06 -2.91 -0.02 -0.31 16 33 H 0.19 -1.04 7.24 -2.91 -0.02 -1.06 16 34 H 0.17 -1.50 6.95 -2.91 -0.02 -1.52 16 35 H 0.17 -1.71 6.38 -2.91 -0.02 -1.73 16 36 H 0.41 -2.35 4.87 -92.71 -0.45 -2.80 16 37 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 38 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 39 H 0.09 -0.90 8.14 -2.39 -0.02 -0.92 16 40 H 0.07 -0.58 6.51 -2.39 -0.02 -0.60 16 41 H 0.39 -3.71 9.08 -74.06 -0.67 -4.38 16 42 H 0.06 0.06 7.60 -2.39 -0.02 0.04 16 43 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 44 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 45 H 0.09 -0.19 8.14 -2.39 -0.02 -0.21 16 46 H 0.41 1.55 9.06 -74.06 -0.67 0.88 16 47 H 0.12 1.29 7.90 -2.91 -0.02 1.27 16 Total: 0.00 -32.56 387.07 -2.37 -34.93 By element: Atomic # 1 Polarization: -22.08 SS G_CDS: -1.34 Total: -23.42 kcal Atomic # 6 Polarization: 3.89 SS G_CDS: 3.14 Total: 7.03 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: -1.86 Total: -1.73 kcal Atomic # 8 Polarization: -14.62 SS G_CDS: -4.50 Total: -19.12 kcal Atomic # 14 Polarization: 0.10 SS G_CDS: 2.20 Total: 2.31 kcal Total: -32.56 -2.37 -34.93 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12807986.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.041 kcal (2) G-P(sol) polarization free energy of solvation -32.564 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.604 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.368 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.932 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.972 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds