Wall clock time and date at job start Sat Mar 6 2021 23:54:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.39290 * 121.02736 * 2 1 4 4 C 1.46498 * 134.20266 * 359.33863 * 3 2 1 5 5 C 1.50702 * 126.59580 * 0.72469 * 4 3 2 6 6 O 1.42899 * 109.47439 * 74.71392 * 5 4 3 7 7 Si 1.86304 * 109.46982 * 194.71355 * 5 4 3 8 8 C 1.34177 * 106.80617 * 180.46211 * 4 3 2 9 9 N 1.36947 * 109.94906 * 0.22316 * 8 4 3 10 10 C 1.37160 * 110.11620 * 0.02562 * 9 8 4 11 11 N 1.32814 * 132.96383 * 179.97438 * 10 9 8 12 12 C 1.31306 * 121.89157 * 179.97438 * 11 10 9 13 13 C 1.39752 * 121.03564 * 179.73159 * 2 1 3 14 14 C 1.47661 * 120.44883 * 0.02562 * 13 2 1 15 15 O 1.21573 * 120.00202 * 354.00943 * 14 13 2 16 16 N 1.34780 * 119.99498 * 174.00655 * 14 13 2 17 17 C 1.46501 * 119.99745 * 180.02562 * 16 14 13 18 18 H 1.08997 * 109.47076 * 35.00026 * 17 16 14 19 19 C 1.53002 * 109.47131 * 155.00304 * 17 16 14 20 20 C 1.52994 * 109.47042 * 59.99756 * 19 17 16 21 21 C 1.52998 * 109.47569 * 60.00195 * 20 19 17 22 22 H 1.09009 * 109.46769 * 59.99812 * 21 20 19 23 23 O 1.42900 * 109.47430 * 179.97438 * 21 20 19 24 24 C 1.52995 * 109.47001 * 300.00124 * 21 20 19 25 25 C 1.53001 * 109.47035 * 275.00059 * 17 16 14 26 26 H 1.09002 * 109.47257 * 263.97598 * 1 2 3 27 27 H 1.09004 * 109.47595 * 23.98166 * 1 2 3 28 28 H 1.09006 * 109.46732 * 143.97706 * 1 2 3 29 29 H 1.08995 * 109.47346 * 314.70896 * 5 4 3 30 30 H 0.96700 * 114.00010 * 59.99337 * 6 5 4 31 31 H 1.48500 * 110.00115 * 179.97438 * 7 5 4 32 32 H 1.48502 * 109.99721 * 301.31917 * 7 5 4 33 33 H 1.07992 * 125.02678 * 180.20189 * 8 4 3 34 34 H 0.97000 * 124.94751 * 180.02562 * 9 8 4 35 35 H 1.07996 * 119.31676 * 179.97438 * 12 11 10 36 36 H 0.96998 * 120.00498 * 0.02562 * 16 14 13 37 37 H 1.09001 * 109.47111 * 180.02562 * 19 17 16 38 38 H 1.08996 * 109.46627 * 299.99524 * 19 17 16 39 39 H 1.09011 * 109.47003 * 179.97438 * 20 19 17 40 40 H 1.09000 * 109.47210 * 299.99691 * 20 19 17 41 41 H 0.96702 * 113.99499 * 180.02562 * 23 21 20 42 42 H 1.09004 * 109.47646 * 179.97438 * 24 21 20 43 43 H 1.09001 * 109.46870 * 299.99307 * 24 21 20 44 44 H 1.08998 * 109.47247 * 59.99857 * 25 17 16 45 45 H 1.09000 * 109.47447 * 179.97438 * 25 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1936 0.0000 4 6 1.8515 2.6101 -0.0121 5 6 0.4525 3.1705 -0.0140 6 8 -0.1187 3.0299 1.2883 7 14 0.5067 4.9743 -0.4768 8 6 2.9946 3.3127 -0.0154 9 7 4.0668 2.4606 -0.0113 10 6 3.6347 1.1588 -0.0058 11 7 4.2720 -0.0064 -0.0010 12 6 3.6268 -1.1500 0.0044 13 6 2.2275 -1.1974 0.0056 14 6 1.5226 -2.4949 0.0111 15 8 0.3122 -2.5287 0.1207 16 7 2.2210 -3.6417 -0.1054 17 6 1.5216 -4.9290 -0.1005 18 1 0.5589 -4.8213 -0.6000 19 6 2.3653 -5.9706 -0.8382 20 6 3.7167 -6.1217 -0.1370 21 6 3.4942 -6.5756 1.3070 22 1 2.9738 -7.5335 1.3106 23 8 4.7564 -6.7173 1.9617 24 6 2.6505 -5.5341 2.0447 25 6 1.2990 -5.3830 1.3436 26 1 -0.3634 -0.1078 1.0220 27 1 -0.3634 0.9390 -0.4177 28 1 -0.3633 -0.8312 -0.6044 29 1 -0.1553 2.6279 -0.7379 30 1 0.3714 3.4884 1.9844 31 1 -0.8668 5.5386 -0.4829 32 1 1.3585 5.7199 0.4844 33 1 3.0597 4.3906 -0.0207 34 1 4.9964 2.7373 -0.0122 35 1 4.1870 -2.0732 0.0078 36 1 3.1867 -3.6148 -0.1925 37 1 1.8447 -6.9283 -0.8350 38 1 2.5238 -5.6472 -1.8669 39 1 4.3176 -6.8641 -0.6624 40 1 4.2371 -5.1639 -0.1407 41 1 4.6916 -7.0038 2.8831 42 1 2.4915 -5.8577 3.0734 43 1 3.1709 -4.5764 2.0411 44 1 0.6980 -4.6409 1.8692 45 1 0.7783 -6.3405 1.3473 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_12890568.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:54:02 Heat of formation + Delta-G solvation = -44.816389 kcal Electronic energy + Delta-G solvation = -29248.513237 eV Core-core repulsion = 25232.853508 eV Total energy + Delta-G solvation = -4015.659729 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.157 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.83794 -41.34169 -39.76881 -38.61734 -37.83881 -36.99644 -34.98769 -34.08609 -31.98369 -31.91663 -31.22326 -29.55527 -28.68780 -26.49682 -24.77385 -24.03883 -23.83569 -23.11853 -22.06470 -20.73306 -20.26264 -19.26599 -18.86433 -18.26061 -17.78881 -17.52103 -16.94559 -16.73158 -16.50120 -16.43455 -15.81934 -15.72410 -15.48773 -15.43478 -14.97160 -14.76975 -14.60569 -14.23534 -14.03255 -13.95787 -13.77353 -13.64539 -13.51609 -13.34594 -13.19919 -12.98264 -12.87346 -12.44403 -12.26677 -12.21168 -11.82021 -11.77771 -11.27991 -11.16411 -11.01994 -10.80213 -10.46497 -10.20239 -10.01616 -9.56918 -9.12852 -5.00728 -0.20401 -0.03679 1.23132 1.37930 1.50439 1.61754 1.92856 1.97031 2.14834 2.87716 3.12042 3.29389 3.39008 3.52120 3.59114 3.60499 3.63844 3.74880 3.81364 3.97020 4.00500 4.09818 4.13211 4.24219 4.28816 4.30173 4.33908 4.43473 4.45948 4.55537 4.67338 4.76590 4.81493 4.94709 4.99746 5.01270 5.01821 5.06813 5.09343 5.19035 5.22264 5.27121 5.40427 5.48535 5.61582 5.79619 6.10566 6.44646 6.51903 6.65656 6.87489 7.29156 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C 0.085 3.915 3 C -0.148 4.148 4 C -0.176 4.176 5 C -0.044 4.044 6 O -0.526 6.526 7 Si 0.685 3.315 8 C 0.067 3.933 9 N -0.570 5.570 10 C 0.307 3.693 11 N -0.504 5.504 12 C 0.181 3.819 13 C -0.234 4.234 14 C 0.572 3.428 15 O -0.529 6.529 16 N -0.722 5.722 17 C 0.145 3.855 18 H 0.095 0.905 19 C -0.126 4.126 20 C -0.115 4.115 21 C 0.103 3.897 22 H 0.057 0.943 23 O -0.569 6.569 24 C -0.151 4.151 25 C -0.129 4.129 26 H 0.085 0.915 27 H 0.069 0.931 28 H 0.097 0.903 29 H 0.120 0.880 30 H 0.374 0.626 31 H -0.254 1.254 32 H -0.258 1.258 33 H 0.183 0.817 34 H 0.425 0.575 35 H 0.160 0.840 36 H 0.398 0.602 37 H 0.084 0.916 38 H 0.079 0.921 39 H 0.076 0.924 40 H 0.067 0.933 41 H 0.379 0.621 42 H 0.065 0.935 43 H 0.070 0.930 44 H 0.074 0.926 45 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.474 0.962 -1.686 3.145 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.077 3.923 3 C -0.155 4.155 4 C -0.184 4.184 5 C -0.154 4.154 6 O -0.332 6.332 7 Si 0.585 3.415 8 C -0.060 4.060 9 N -0.175 5.175 10 C 0.074 3.926 11 N -0.217 5.217 12 C 0.012 3.988 13 C -0.241 4.241 14 C 0.360 3.640 15 O -0.407 6.407 16 N -0.375 5.375 17 C 0.041 3.959 18 H 0.113 0.887 19 C -0.164 4.164 20 C -0.152 4.152 21 C 0.044 3.956 22 H 0.075 0.925 23 O -0.375 6.375 24 C -0.189 4.189 25 C -0.168 4.168 26 H 0.104 0.896 27 H 0.088 0.912 28 H 0.115 0.885 29 H 0.137 0.863 30 H 0.222 0.778 31 H -0.178 1.178 32 H -0.183 1.183 33 H 0.200 0.800 34 H 0.264 0.736 35 H 0.177 0.823 36 H 0.234 0.766 37 H 0.102 0.898 38 H 0.097 0.903 39 H 0.095 0.905 40 H 0.086 0.914 41 H 0.227 0.773 42 H 0.084 0.916 43 H 0.089 0.911 44 H 0.092 0.908 45 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 2.225 1.756 -2.285 3.641 hybrid contribution 0.196 -0.288 1.825 1.858 sum 2.422 1.468 -0.460 2.869 Atomic orbital electron populations 1.21175 0.88699 1.03737 1.04272 1.19927 0.97157 0.89146 0.86096 1.19460 0.92759 0.93517 1.09793 1.20619 0.95213 0.91049 1.11542 1.24466 0.90944 1.11699 0.88312 1.86637 1.54230 1.75846 1.16447 0.95171 0.82659 0.73609 0.90026 1.21791 0.85119 0.95951 1.03131 1.41513 1.09584 1.02718 1.63708 1.18503 0.89359 0.85882 0.98828 1.66433 1.40571 0.96001 1.18654 1.22495 0.90131 0.94399 0.91779 1.20447 0.94721 0.93843 1.15119 1.17866 0.86833 0.83261 0.76010 1.90754 1.13499 1.87073 1.49380 1.46037 1.10738 1.05510 1.75265 1.20983 0.96743 0.82015 0.96144 0.88713 1.21826 0.95507 0.99472 0.99607 1.21484 0.97426 1.02376 0.93959 1.21838 0.84069 0.97120 0.92541 0.92527 1.86510 1.29970 1.91218 1.29773 1.22248 0.96557 1.00565 0.99530 1.21889 0.97021 1.02264 0.95633 0.89613 0.91208 0.88458 0.86287 0.77845 1.17827 1.18265 0.79981 0.73609 0.82255 0.76577 0.89775 0.90250 0.90544 0.91435 0.77320 0.91593 0.91080 0.90772 0.90661 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.37 8.69 36.00 0.31 -0.05 16 2 C 0.09 0.27 5.98 -103.67 -0.62 -0.35 16 3 C -0.15 -0.38 6.16 -105.12 -0.65 -1.03 16 4 C -0.18 -0.03 5.57 -102.73 -0.57 -0.61 16 5 C -0.04 0.02 2.06 36.01 0.07 0.10 16 6 O -0.53 -0.52 12.88 -35.23 -0.45 -0.98 16 7 Si 0.68 -1.45 30.83 -169.99 -5.24 -6.69 16 8 C 0.07 -0.12 10.44 -16.70 -0.17 -0.29 16 9 N -0.57 0.42 6.04 -12.12 -0.07 0.35 16 10 C 0.31 0.74 8.42 -155.71 -1.31 -0.57 16 11 N -0.50 -1.45 10.37 -11.96 -0.12 -1.57 16 12 C 0.18 0.26 10.67 -17.11 -0.18 0.08 16 13 C -0.23 -0.57 5.89 -104.82 -0.62 -1.19 16 14 C 0.57 1.42 7.68 -12.41 -0.10 1.32 16 15 O -0.53 -2.74 13.16 5.30 0.07 -2.67 16 16 N -0.72 0.23 4.18 -54.81 -0.23 0.00 16 17 C 0.15 -0.11 2.78 -67.93 -0.19 -0.30 16 18 H 0.09 0.05 7.58 -51.93 -0.39 -0.34 16 19 C -0.13 0.29 5.61 -26.73 -0.15 0.14 16 20 C -0.11 0.18 5.40 -26.73 -0.14 0.03 16 21 C 0.10 -0.11 3.47 -26.73 -0.09 -0.20 16 22 H 0.06 -0.09 8.14 -51.92 -0.42 -0.51 16 23 O -0.57 -0.18 13.32 -35.23 -0.47 -0.64 16 24 C -0.15 0.15 5.39 -26.73 -0.14 0.01 16 25 C -0.13 0.08 5.60 -26.73 -0.15 -0.07 16 26 H 0.09 0.33 8.14 -51.93 -0.42 -0.09 16 27 H 0.07 0.14 5.06 -51.93 -0.26 -0.13 16 28 H 0.10 0.38 5.95 -51.93 -0.31 0.07 16 29 H 0.12 -0.07 6.05 -51.93 -0.31 -0.38 16 30 H 0.37 -0.69 8.70 45.56 0.40 -0.30 16 31 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 32 H -0.26 0.27 7.00 56.52 0.40 0.66 16 33 H 0.18 -0.89 6.28 -52.49 -0.33 -1.22 16 34 H 0.43 -1.37 8.96 -40.82 -0.37 -1.74 16 35 H 0.16 -0.27 6.43 -52.49 -0.34 -0.60 16 36 H 0.40 -0.79 4.94 -40.82 -0.20 -0.99 16 37 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 38 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 39 H 0.08 -0.09 8.14 -51.92 -0.42 -0.51 16 40 H 0.07 -0.11 6.51 -51.93 -0.34 -0.45 16 41 H 0.38 -1.20 9.08 45.56 0.41 -0.79 16 42 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 43 H 0.07 0.00 7.60 -51.93 -0.39 -0.40 16 44 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 45 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 LS Contribution 352.97 15.07 5.32 5.32 Total: 0.00 -9.31 352.97 -10.93 -20.24 By element: Atomic # 1 Polarization: -5.34 SS G_CDS: -5.02 Total: -10.37 kcal Atomic # 6 Polarization: 1.72 SS G_CDS: -4.70 Total: -2.98 kcal Atomic # 7 Polarization: -0.80 SS G_CDS: -0.43 Total: -1.23 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -0.85 Total: -4.30 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.24 Total: -6.69 kcal Total LS contribution 5.32 Total: 5.32 kcal Total: -9.31 -10.93 -20.24 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_12890568.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.575 kcal (2) G-P(sol) polarization free energy of solvation -9.315 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.890 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.926 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.241 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.816 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds