Wall clock time and date at job start Sat Mar 6 2021 23:54:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86295 * 109.47133 * 2 1 4 4 C 1.50699 * 109.47324 * 120.00190 * 2 1 3 5 5 C 1.38336 * 119.87218 * 64.99982 * 4 2 1 6 6 C 1.38002 * 120.12714 * 180.02562 * 5 4 2 7 7 C 1.39403 * 119.86952 * 359.97438 * 6 5 4 8 8 C 1.48282 * 120.12414 * 180.02562 * 7 6 5 9 9 C 1.39498 * 119.97227 * 180.02562 * 8 7 6 10 10 C 1.37671 * 120.02163 * 180.02562 * 9 8 7 11 11 C 1.39700 * 119.97374 * 359.97438 * 10 9 8 12 12 C 1.47730 * 120.02360 * 179.97438 * 11 10 9 13 13 O 1.21573 * 119.99415 * 0.02562 * 12 11 10 14 14 N 1.34774 * 119.99867 * 180.02562 * 12 11 10 15 15 C 1.46496 * 119.99635 * 180.02562 * 14 12 11 16 16 H 1.08997 * 109.47390 * 34.99568 * 15 14 12 17 17 C 1.53000 * 109.47504 * 154.99997 * 15 14 12 18 18 C 1.52998 * 109.47079 * 59.99342 * 17 15 14 19 19 C 1.52999 * 109.46788 * 60.00646 * 18 17 15 20 20 H 1.08997 * 109.47286 * 59.99783 * 19 18 17 21 21 O 1.42903 * 109.47256 * 180.02562 * 19 18 17 22 22 C 1.53003 * 109.47142 * 299.99504 * 19 18 17 23 23 C 1.52999 * 109.47088 * 274.99795 * 15 14 12 24 24 C 1.39707 * 119.95387 * 0.25848 * 11 10 9 25 25 C 1.37662 * 119.97498 * 359.46379 * 24 11 10 26 26 C 1.39400 * 119.74566 * 0.27932 * 7 6 5 27 27 C 1.37997 * 119.87217 * 359.47246 * 26 7 6 28 28 H 0.96701 * 114.00203 * 299.99849 * 1 2 3 29 29 H 1.09004 * 109.46507 * 240.00173 * 2 1 3 30 30 H 1.48500 * 110.00183 * 178.68626 * 3 2 1 31 31 H 1.48501 * 110.00141 * 300.00258 * 3 2 1 32 32 H 1.08001 * 119.93393 * 359.97316 * 5 4 2 33 33 H 1.07994 * 120.06140 * 179.97438 * 6 5 4 34 34 H 1.08004 * 119.99172 * 359.97006 * 9 8 7 35 35 H 1.07995 * 120.00699 * 180.02562 * 10 9 8 36 36 H 0.97000 * 120.00416 * 0.02562 * 14 12 11 37 37 H 1.09009 * 109.46884 * 299.99818 * 17 15 14 38 38 H 1.08997 * 109.47412 * 179.97438 * 17 15 14 39 39 H 1.08997 * 109.47384 * 300.00489 * 18 17 15 40 40 H 1.08997 * 109.47329 * 180.02562 * 18 17 15 41 41 H 0.96700 * 114.00311 * 180.02562 * 21 19 18 42 42 H 1.08999 * 109.47269 * 180.02562 * 22 19 18 43 43 H 1.08997 * 109.47258 * 300.00296 * 22 19 18 44 44 H 1.08999 * 109.47350 * 60.00063 * 23 15 14 45 45 H 1.08997 * 109.47286 * 180.02562 * 23 15 14 46 46 H 1.08004 * 120.01129 * 179.72266 * 24 11 10 47 47 H 1.08004 * 119.99273 * 180.27620 * 25 24 11 48 48 H 1.08007 * 120.06272 * 179.71847 * 26 7 6 49 49 H 1.08004 * 119.93666 * 180.27454 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6831 -2.0613 1.3957 6 6 2.1402 -2.7170 2.5207 7 6 2.8539 -2.0155 3.4912 8 6 3.3482 -2.7145 4.7019 9 6 4.0616 -2.0094 5.6713 10 6 4.5214 -2.6575 6.7955 11 6 4.2730 -4.0217 6.9654 12 6 4.7664 -4.7184 8.1710 13 8 5.3886 -4.1044 9.0159 14 7 4.5269 -6.0346 8.3341 15 6 5.0157 -6.7253 9.5300 16 1 4.9683 -6.0503 10.3844 17 6 4.1449 -7.9536 9.8014 18 6 4.2115 -8.9012 8.6020 19 6 5.6597 -9.3419 8.3802 20 1 6.0235 -9.8558 9.2699 21 8 5.7222 -10.2264 7.2596 22 6 6.5307 -8.1136 8.1087 23 6 6.4640 -7.1660 9.3081 24 6 3.5626 -4.7279 5.9915 25 6 3.0988 -4.0767 4.8709 26 6 3.0964 -0.6533 3.3217 27 6 2.6388 -0.0092 2.1903 28 1 -0.3934 0.4417 0.7651 29 1 1.7922 -0.5138 -0.8901 30 1 3.5345 1.7703 0.0320 31 1 1.5614 2.4679 -1.2085 32 1 1.1297 -2.6035 0.6433 33 1 1.9454 -3.7714 2.6488 34 1 4.2539 -0.9548 5.5396 35 1 5.0733 -2.1113 7.5461 36 1 4.0308 -6.5246 7.6598 37 1 3.1130 -7.6397 9.9595 38 1 4.5089 -8.4678 10.6909 39 1 3.8477 -8.3873 7.7123 40 1 3.5907 -9.7760 8.7952 41 1 6.6126 -10.5468 7.0604 42 1 7.5624 -8.4276 7.9502 43 1 6.1670 -7.5997 7.2190 44 1 7.0845 -6.2910 9.1148 45 1 6.8276 -7.6803 10.1977 46 1 3.3739 -5.7836 6.1198 47 1 2.5457 -4.6214 4.1200 48 1 3.6449 -0.1038 4.0726 49 1 2.8300 1.0452 2.0558 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_13158362.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:54:05 Heat of formation + Delta-G solvation = -69.713188 kcal Electronic energy + Delta-G solvation = -30214.662605 eV Core-core repulsion = 26072.322811 eV Total energy + Delta-G solvation = -4142.339794 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -41.65275 -40.96229 -39.95710 -38.98515 -37.56409 -36.99743 -34.44871 -33.75329 -32.63299 -32.01080 -31.65549 -31.03691 -29.62493 -26.99751 -24.73923 -24.65507 -23.89648 -23.32556 -22.63571 -22.48281 -21.46235 -20.25347 -19.41617 -18.52565 -18.30130 -17.81220 -17.16814 -16.89094 -16.71360 -16.35058 -16.21218 -15.95980 -15.74010 -15.52712 -15.42967 -15.08546 -14.98566 -14.87695 -14.74974 -14.33946 -14.26216 -14.12406 -14.08892 -13.99580 -13.59843 -13.39927 -13.22161 -12.94244 -12.78699 -12.58777 -12.32661 -12.29604 -12.04638 -12.01604 -11.83456 -11.67639 -11.33092 -10.92122 -10.85664 -10.77728 -10.45652 -10.11754 -10.09116 -10.04281 -9.11946 -5.07903 -0.71127 0.28613 0.32065 0.48521 1.24293 1.59465 1.86229 1.93825 2.09349 2.58634 2.97341 3.07094 3.33596 3.43944 3.51250 3.53774 3.58603 3.63315 3.73465 3.79045 3.87948 3.91758 3.94990 3.98094 4.08269 4.17455 4.20662 4.23471 4.27574 4.28720 4.39881 4.43229 4.49979 4.56680 4.62245 4.71529 4.78573 4.84603 4.89430 4.94275 4.96165 4.97782 5.01094 5.08337 5.13437 5.14025 5.21098 5.24229 5.35212 5.41895 5.46731 5.58616 5.74693 5.84171 6.45286 6.51514 6.61013 7.20209 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.069 4.069 3 Si 0.686 3.314 4 C -0.114 4.114 5 C -0.090 4.090 6 C -0.105 4.105 7 C -0.049 4.049 8 C -0.018 4.018 9 C -0.118 4.118 10 C -0.054 4.054 11 C -0.136 4.136 12 C 0.560 3.440 13 O -0.534 6.534 14 N -0.720 5.720 15 C 0.143 3.857 16 H 0.095 0.905 17 C -0.126 4.126 18 C -0.115 4.115 19 C 0.103 3.897 20 H 0.057 0.943 21 O -0.569 6.569 22 C -0.151 4.151 23 C -0.130 4.130 24 C -0.082 4.082 25 C -0.118 4.118 26 C -0.101 4.101 27 C -0.113 4.113 28 H 0.379 0.621 29 H 0.114 0.886 30 H -0.257 1.257 31 H -0.254 1.254 32 H 0.129 0.871 33 H 0.129 0.871 34 H 0.135 0.865 35 H 0.140 0.860 36 H 0.399 0.601 37 H 0.079 0.921 38 H 0.084 0.916 39 H 0.066 0.934 40 H 0.076 0.924 41 H 0.380 0.620 42 H 0.066 0.934 43 H 0.070 0.930 44 H 0.073 0.927 45 H 0.076 0.924 46 H 0.127 0.873 47 H 0.133 0.867 48 H 0.132 0.868 49 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.013 -1.018 1.076 1.795 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.180 4.180 3 Si 0.588 3.412 4 C -0.114 4.114 5 C -0.109 4.109 6 C -0.123 4.123 7 C -0.049 4.049 8 C -0.018 4.018 9 C -0.136 4.136 10 C -0.073 4.073 11 C -0.139 4.139 12 C 0.347 3.653 13 O -0.412 6.412 14 N -0.373 5.373 15 C 0.039 3.961 16 H 0.113 0.887 17 C -0.164 4.164 18 C -0.152 4.152 19 C 0.044 3.956 20 H 0.075 0.925 21 O -0.375 6.375 22 C -0.189 4.189 23 C -0.168 4.168 24 C -0.101 4.101 25 C -0.136 4.136 26 C -0.118 4.118 27 C -0.131 4.131 28 H 0.227 0.773 29 H 0.131 0.869 30 H -0.182 1.182 31 H -0.179 1.179 32 H 0.147 0.853 33 H 0.147 0.853 34 H 0.153 0.847 35 H 0.158 0.842 36 H 0.236 0.764 37 H 0.097 0.903 38 H 0.103 0.897 39 H 0.085 0.915 40 H 0.095 0.905 41 H 0.227 0.773 42 H 0.085 0.915 43 H 0.089 0.911 44 H 0.092 0.908 45 H 0.094 0.906 46 H 0.144 0.856 47 H 0.151 0.849 48 H 0.150 0.850 49 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -0.635 -0.192 0.717 0.977 hybrid contribution 0.547 -1.044 -0.527 1.291 sum -0.088 -1.236 0.191 1.254 Atomic orbital electron populations 1.86514 1.16969 1.81705 1.49262 1.25076 0.85337 1.10155 0.97468 0.94761 0.81125 0.78015 0.87335 1.20453 0.99186 0.95040 0.96762 1.20978 0.98593 0.93739 0.97541 1.21320 0.97309 1.00135 0.93493 1.18817 0.98755 0.93476 0.93816 1.18987 0.96255 0.93300 0.93244 1.21247 0.98356 1.00480 0.93497 1.21224 0.96214 0.92932 0.96914 1.19988 1.03094 0.95095 0.95768 1.18276 0.79296 0.81753 0.85948 1.90795 1.40395 1.66203 1.43770 1.46054 1.57896 1.09208 1.24180 1.21007 0.93195 0.93593 0.88287 0.88737 1.21830 1.00860 0.94939 0.98784 1.21480 0.95573 0.99763 0.98407 1.21837 0.95892 0.89243 0.88589 0.92458 1.86506 1.34581 1.65688 1.50720 1.22250 1.00311 0.96928 0.99412 1.21889 0.96615 0.99730 0.98585 1.21195 0.96092 0.99522 0.93262 1.21162 1.00603 0.93742 0.98050 1.21228 0.99388 0.93605 0.97608 1.20939 0.98686 0.99348 0.94099 0.77318 0.86865 1.18204 1.17904 0.85305 0.85293 0.84746 0.84234 0.76395 0.90250 0.89695 0.91539 0.90499 0.77279 0.91516 0.91129 0.90795 0.90571 0.85555 0.84918 0.85013 0.85262 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.02 12.83 -35.23 -0.45 -0.43 16 2 C -0.07 0.04 2.80 36.01 0.10 0.14 16 3 Si 0.69 -0.86 29.79 -169.99 -5.06 -5.93 16 4 C -0.11 0.03 5.36 -104.55 -0.56 -0.53 16 5 C -0.09 0.00 9.67 -39.63 -0.38 -0.38 16 6 C -0.10 0.03 9.43 -39.23 -0.37 -0.34 16 7 C -0.05 0.00 5.88 -104.90 -0.62 -0.62 16 8 C -0.02 0.00 5.88 -104.83 -0.62 -0.62 16 9 C -0.12 0.00 9.41 -39.32 -0.37 -0.37 16 10 C -0.05 -0.06 9.58 -39.24 -0.38 -0.44 16 11 C -0.14 -0.17 5.88 -104.92 -0.62 -0.78 16 12 C 0.56 1.33 7.73 -12.38 -0.10 1.23 16 13 O -0.53 -3.12 16.00 5.30 0.08 -3.04 16 14 N -0.72 0.24 4.18 -54.79 -0.23 0.02 16 15 C 0.14 -0.09 2.78 -67.93 -0.19 -0.28 16 16 H 0.09 0.07 7.58 -51.93 -0.39 -0.32 16 17 C -0.13 0.30 5.61 -26.73 -0.15 0.15 16 18 C -0.11 0.20 5.40 -26.73 -0.14 0.05 16 19 C 0.10 -0.13 3.47 -26.73 -0.09 -0.22 16 20 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 21 O -0.57 -0.04 13.32 -35.23 -0.47 -0.50 16 22 C -0.15 0.18 5.39 -26.73 -0.14 0.03 16 23 C -0.13 0.08 5.60 -26.73 -0.15 -0.07 16 24 C -0.08 0.05 9.52 -39.24 -0.37 -0.32 16 25 C -0.12 0.07 9.41 -39.32 -0.37 -0.30 16 26 C -0.10 0.07 9.43 -39.24 -0.37 -0.30 16 27 C -0.11 0.11 8.65 -39.64 -0.34 -0.24 16 28 H 0.38 -1.46 8.70 45.56 0.40 -1.06 16 29 H 0.11 -0.01 7.96 -51.93 -0.41 -0.42 16 30 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 31 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 32 H 0.13 -0.08 8.06 -52.49 -0.42 -0.50 16 33 H 0.13 -0.26 6.19 -52.49 -0.33 -0.59 16 34 H 0.13 -0.26 6.19 -52.48 -0.32 -0.59 16 35 H 0.14 0.17 7.64 -52.49 -0.40 -0.23 16 36 H 0.40 -0.85 4.88 -40.82 -0.20 -1.05 16 37 H 0.08 -0.21 8.14 -51.92 -0.42 -0.63 16 38 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 39 H 0.07 -0.12 6.51 -51.93 -0.34 -0.46 16 40 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 41 H 0.38 -1.30 9.08 45.56 0.41 -0.88 16 42 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 43 H 0.07 -0.02 7.60 -51.93 -0.39 -0.41 16 44 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 45 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 46 H 0.13 -0.38 6.39 -52.48 -0.34 -0.72 16 47 H 0.13 -0.33 6.19 -52.48 -0.32 -0.66 16 48 H 0.13 -0.33 6.19 -52.48 -0.33 -0.66 16 49 H 0.13 -0.37 4.89 -52.48 -0.26 -0.63 16 LS Contribution 388.23 15.07 5.85 5.85 Total: 0.00 -8.88 388.23 -12.31 -21.19 By element: Atomic # 1 Polarization: -7.15 SS G_CDS: -5.80 Total: -12.96 kcal Atomic # 6 Polarization: 2.03 SS G_CDS: -6.23 Total: -4.20 kcal Atomic # 7 Polarization: 0.24 SS G_CDS: -0.23 Total: 0.02 kcal Atomic # 8 Polarization: -3.14 SS G_CDS: -0.84 Total: -3.97 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.06 Total: -5.93 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -8.88 -12.31 -21.19 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_13158362.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.521 kcal (2) G-P(sol) polarization free energy of solvation -8.883 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.404 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.309 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.192 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.713 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds