Wall clock time and date at job start Sat Mar 6 2021 23:54:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50699 * 109.47152 * 119.99802 * 2 1 3 5 5 C 1.38898 * 119.67263 * 244.72876 * 4 2 1 6 6 C 1.36477 * 120.61410 * 179.76190 * 5 4 2 7 7 C 1.40064 * 119.82586 * 0.50894 * 6 5 4 8 8 C 1.41596 * 133.37748 * 179.74350 * 7 6 5 9 9 C 1.35865 * 107.72527 * 180.02562 * 8 7 6 10 10 C 1.47059 * 125.42472 * 180.02562 * 9 8 7 11 11 O 1.21654 * 119.99870 * 359.97438 * 10 9 8 12 12 N 1.34778 * 120.00107 * 179.97438 * 10 9 8 13 13 C 1.46504 * 119.99817 * 179.97438 * 12 10 9 14 14 H 1.09000 * 109.46991 * 35.00118 * 13 12 10 15 15 C 1.53001 * 109.46649 * 154.99874 * 13 12 10 16 16 C 1.53000 * 109.47124 * 59.99997 * 15 13 12 17 17 C 1.53007 * 109.47314 * 59.99881 * 16 15 13 18 18 H 1.09000 * 109.46743 * 59.99637 * 17 16 15 19 19 O 1.42894 * 109.47064 * 180.02562 * 17 16 15 20 20 C 1.53008 * 109.46844 * 300.00171 * 17 16 15 21 21 C 1.53000 * 109.47305 * 59.99823 * 20 17 16 22 22 N 1.38146 * 109.14980 * 0.02562 * 9 8 7 23 23 C 1.37488 * 108.78833 * 359.97438 * 22 9 8 24 24 C 1.37708 * 119.67530 * 65.00131 * 4 2 1 25 25 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 26 26 H 1.08997 * 109.47332 * 240.00042 * 2 1 3 27 27 H 1.48499 * 109.99670 * 298.67876 * 3 2 1 28 28 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 29 29 H 1.08001 * 119.69406 * 0.02562 * 5 4 2 30 30 H 1.08001 * 120.08424 * 180.25309 * 6 5 4 31 31 H 1.08003 * 126.13529 * 0.02562 * 8 7 6 32 32 H 0.97000 * 119.99573 * 359.97438 * 12 10 9 33 33 H 1.09001 * 109.46849 * 179.97438 * 15 13 12 34 34 H 1.09001 * 109.47399 * 300.00084 * 15 13 12 35 35 H 1.08996 * 109.47220 * 179.97438 * 16 15 13 36 36 H 1.09000 * 109.47512 * 299.99989 * 16 15 13 37 37 H 0.96713 * 113.99630 * 180.02562 * 19 17 16 38 38 H 1.09002 * 109.46620 * 180.02562 * 20 17 16 39 39 H 1.08997 * 109.46665 * 299.99685 * 20 17 16 40 40 H 1.08996 * 109.47220 * 180.02562 * 21 20 17 41 41 H 1.09004 * 109.47050 * 59.99720 * 21 20 17 42 42 H 0.96995 * 125.60423 * 179.97438 * 22 9 8 43 43 H 1.07997 * 120.09449 * 359.95867 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6463 -0.0035 2.1888 6 6 3.1060 -0.6265 3.3127 7 6 2.8654 -1.9936 3.4992 8 6 3.2032 -2.9094 4.5249 9 6 2.7047 -4.1241 4.1756 10 6 2.8322 -5.3573 4.9665 11 8 3.4247 -5.3401 6.0289 12 7 2.2927 -6.5067 4.5144 13 6 2.4202 -7.7353 5.3021 14 1 2.3797 -7.4921 6.3638 15 6 1.2738 -8.6864 4.9527 16 6 1.3306 -9.0277 3.4623 17 6 2.6670 -9.7013 3.1439 18 1 2.7618 -10.6154 3.7300 19 8 2.7203 -10.0196 1.7519 20 6 3.8135 -8.7502 3.4934 21 6 3.7567 -8.4088 4.9837 22 7 2.0590 -4.0161 2.9591 23 6 2.1458 -2.7143 2.5257 24 6 1.6819 -2.0551 1.3910 25 1 -0.3934 0.4416 -0.7651 26 1 1.7924 -0.5138 -0.8899 27 1 1.5877 2.4585 -1.2243 28 1 1.5613 2.4680 1.2084 29 1 2.8365 1.0499 2.0453 30 1 3.6575 -0.0676 4.0543 31 1 3.7577 -2.6830 5.4237 32 1 1.8200 -6.5203 3.6675 33 1 1.3689 -9.6007 5.5384 34 1 0.3217 -8.2065 5.1794 35 1 0.5141 -9.7056 3.2135 36 1 1.2358 -8.1136 2.8763 37 1 3.5416 -10.4505 1.4781 38 1 4.7655 -9.2299 3.2661 39 1 3.7186 -7.8361 2.9074 40 1 4.5731 -7.7309 5.2326 41 1 3.8515 -9.3230 5.5698 42 1 1.6171 -4.7398 2.4882 43 1 1.1283 -2.5968 0.6383 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_13158378.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:54:09 Heat of formation + Delta-G solvation = -59.103332 kcal Electronic energy + Delta-G solvation = -26324.353299 eV Core-core repulsion = 22529.037571 eV Total energy + Delta-G solvation = -3795.315727 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.66723 -41.22778 -39.59375 -38.79852 -37.12618 -37.02925 -34.22121 -33.25650 -32.07880 -31.28888 -30.39952 -29.85886 -26.85092 -24.56524 -23.96579 -23.40396 -23.03841 -21.91071 -21.30873 -20.36937 -19.67677 -18.55339 -18.36680 -17.95909 -17.34374 -16.84543 -16.78199 -16.41915 -16.16576 -15.76978 -15.39041 -15.34484 -15.03735 -14.78568 -14.69937 -14.58240 -14.25374 -14.16501 -14.09077 -13.84428 -13.47684 -13.45606 -13.01722 -12.70350 -12.40433 -12.36867 -12.29599 -12.08594 -11.91225 -11.62683 -11.40077 -11.21334 -10.91812 -10.88399 -10.48849 -10.24552 -9.27307 -8.77487 -4.94429 -0.29154 0.57450 1.04117 1.28074 1.60766 1.79756 1.94693 1.98273 2.29620 2.77057 3.01068 3.34955 3.44417 3.51690 3.59271 3.65265 3.85063 3.86643 3.88777 4.01119 4.06075 4.16299 4.20657 4.21730 4.32536 4.34079 4.40976 4.43068 4.50272 4.62346 4.65159 4.82753 4.88325 4.88834 4.94172 4.94970 5.00229 5.05072 5.15361 5.28625 5.40904 5.44389 5.59357 5.65538 6.00795 6.21974 6.37281 6.41907 6.55976 7.01867 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.077 4.077 3 Si 0.688 3.312 4 C -0.041 4.041 5 C -0.144 4.144 6 C -0.051 4.051 7 C -0.116 4.116 8 C -0.099 4.099 9 C 0.012 3.988 10 C 0.586 3.414 11 O -0.517 6.517 12 N -0.722 5.722 13 C 0.144 3.856 14 H 0.097 0.903 15 C -0.127 4.127 16 C -0.114 4.114 17 C 0.103 3.897 18 H 0.059 0.941 19 O -0.569 6.569 20 C -0.151 4.151 21 C -0.130 4.130 22 N -0.579 5.579 23 C 0.116 3.884 24 C -0.104 4.104 25 H 0.380 0.620 26 H 0.076 0.924 27 H -0.263 1.263 28 H -0.254 1.254 29 H 0.130 0.870 30 H 0.133 0.867 31 H 0.159 0.841 32 H 0.395 0.605 33 H 0.086 0.914 34 H 0.079 0.921 35 H 0.077 0.923 36 H 0.064 0.936 37 H 0.380 0.620 38 H 0.067 0.933 39 H 0.068 0.932 40 H 0.075 0.925 41 H 0.078 0.922 42 H 0.416 0.584 43 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.222 -2.014 -3.050 3.853 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.186 4.186 3 Si 0.590 3.410 4 C -0.043 4.043 5 C -0.162 4.162 6 C -0.069 4.069 7 C -0.121 4.121 8 C -0.126 4.126 9 C -0.097 4.097 10 C 0.372 3.628 11 O -0.392 6.392 12 N -0.375 5.375 13 C 0.040 3.960 14 H 0.115 0.885 15 C -0.165 4.165 16 C -0.152 4.152 17 C 0.044 3.956 18 H 0.076 0.924 19 O -0.375 6.375 20 C -0.189 4.189 21 C -0.169 4.169 22 N -0.183 5.183 23 C 0.006 3.994 24 C -0.124 4.124 25 H 0.228 0.772 26 H 0.094 0.906 27 H -0.188 1.188 28 H -0.179 1.179 29 H 0.147 0.853 30 H 0.151 0.849 31 H 0.176 0.824 32 H 0.230 0.770 33 H 0.105 0.895 34 H 0.098 0.902 35 H 0.096 0.904 36 H 0.082 0.918 37 H 0.228 0.772 38 H 0.086 0.914 39 H 0.087 0.913 40 H 0.094 0.906 41 H 0.096 0.904 42 H 0.254 0.746 43 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 0.886 -1.392 -1.700 2.369 hybrid contribution -1.035 -0.853 -1.289 1.860 sum -0.148 -2.245 -2.989 3.741 Atomic orbital electron populations 1.86602 1.17766 1.80203 1.49777 1.24827 0.84498 1.11198 0.98089 0.94872 0.91675 0.74370 0.80121 1.18909 0.97695 0.92656 0.94993 1.20464 1.01439 0.99694 0.94636 1.20351 0.97731 0.91950 0.96897 1.18219 1.03710 0.94348 0.95814 1.20968 1.01973 0.89880 0.99769 1.20100 1.04888 0.96009 0.88747 1.17202 0.78939 0.81731 0.84894 1.90877 1.41666 1.85064 1.21641 1.46035 1.57706 1.08783 1.24972 1.21053 0.94975 0.83146 0.96809 0.88455 1.21839 0.98532 0.99957 0.96135 1.21482 0.96952 1.00994 0.95778 1.21841 0.94952 0.96545 0.82267 0.92351 1.86505 1.43820 1.82443 1.24742 1.22250 0.98957 1.00624 0.97048 1.21900 0.97766 1.01271 0.95936 1.41882 1.49023 1.08946 1.18497 1.18273 1.00703 0.83909 0.96502 1.19835 1.02465 0.93978 0.96138 0.77249 0.90566 1.18807 1.17860 0.85290 0.84917 0.82386 0.76976 0.89505 0.90240 0.90426 0.91760 0.77207 0.91380 0.91306 0.90638 0.90374 0.74581 0.85709 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.57 12.80 -35.23 -0.45 -1.02 16 2 C -0.08 0.01 2.78 36.01 0.10 0.11 16 3 Si 0.69 -0.67 29.81 -169.99 -5.07 -5.74 16 4 C -0.04 -0.05 5.39 -104.57 -0.56 -0.62 16 5 C -0.14 -0.12 8.59 -39.97 -0.34 -0.47 16 6 C -0.05 -0.06 10.06 -39.53 -0.40 -0.45 16 7 C -0.12 -0.27 6.16 -106.93 -0.66 -0.93 16 8 C -0.10 -0.24 10.53 -39.15 -0.41 -0.65 16 9 C 0.01 0.02 6.97 -82.29 -0.57 -0.55 16 10 C 0.59 1.24 7.76 -12.68 -0.10 1.14 16 11 O -0.52 -2.83 16.50 5.23 0.09 -2.75 16 12 N -0.72 0.63 4.23 -54.99 -0.23 0.39 16 13 C 0.14 -0.17 2.78 -67.93 -0.19 -0.36 16 14 H 0.10 0.02 7.58 -51.93 -0.39 -0.38 16 15 C -0.13 0.35 5.61 -26.73 -0.15 0.20 16 16 C -0.11 0.24 5.40 -26.73 -0.14 0.09 16 17 C 0.10 -0.17 3.47 -26.72 -0.09 -0.26 16 18 H 0.06 -0.12 8.14 -51.93 -0.42 -0.55 16 19 O -0.57 0.16 13.32 -35.23 -0.47 -0.31 16 20 C -0.15 0.25 5.39 -26.73 -0.14 0.10 16 21 C -0.13 0.16 5.60 -26.73 -0.15 0.01 16 22 N -0.58 -0.04 6.07 -7.36 -0.04 -0.08 16 23 C 0.12 0.21 7.25 -83.97 -0.61 -0.40 16 24 C -0.10 -0.15 9.69 -39.42 -0.38 -0.53 16 25 H 0.38 -1.11 8.74 45.56 0.40 -0.71 16 26 H 0.08 -0.15 7.96 -51.93 -0.41 -0.56 16 27 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 28 H -0.25 -0.54 7.05 56.52 0.40 -0.14 16 29 H 0.13 -0.12 4.81 -52.49 -0.25 -0.37 16 30 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 31 H 0.16 0.26 8.06 -52.48 -0.42 -0.16 16 32 H 0.40 -1.08 5.92 -40.82 -0.24 -1.32 16 33 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 34 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 35 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 36 H 0.06 -0.15 6.51 -51.93 -0.34 -0.48 16 37 H 0.38 -1.43 9.08 45.56 0.41 -1.01 16 38 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 39 H 0.07 -0.05 7.60 -51.93 -0.39 -0.44 16 40 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 41 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 42 H 0.42 -1.15 8.12 -40.82 -0.33 -1.48 16 43 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 LS Contribution 347.80 15.07 5.24 5.24 Total: 0.00 -8.97 347.80 -10.73 -19.70 By element: Atomic # 1 Polarization: -6.90 SS G_CDS: -4.98 Total: -11.88 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: -4.81 Total: -3.56 kcal Atomic # 7 Polarization: 0.59 SS G_CDS: -0.28 Total: 0.31 kcal Atomic # 8 Polarization: -3.24 SS G_CDS: -0.83 Total: -4.08 kcal Atomic # 14 Polarization: -0.67 SS G_CDS: -5.07 Total: -5.74 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -8.97 -10.73 -19.70 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_13158378.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.401 kcal (2) G-P(sol) polarization free energy of solvation -8.975 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.727 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.702 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.103 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds