Wall clock time and date at job start Sat Mar 6 2021 23:54:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.46714 * 2 1 4 4 C 1.50704 * 109.47319 * 119.99940 * 2 1 3 5 5 C 1.34703 * 125.66080 * 64.98517 * 4 2 1 6 6 C 1.40972 * 107.02506 * 179.80229 * 5 4 2 7 7 C 1.35931 * 106.74253 * 0.37809 * 6 5 4 8 8 C 1.47820 * 125.93138 * 179.88747 * 7 6 5 9 9 C 1.39797 * 119.99976 * 359.71368 * 8 7 6 10 10 C 1.37810 * 120.24767 * 179.97438 * 9 8 7 11 11 C 1.38775 * 120.24100 * 0.02562 * 10 9 8 12 12 O 1.35659 * 120.00106 * 179.72861 * 11 10 9 13 13 C 1.40242 * 119.99750 * 359.97438 * 11 10 9 14 14 C 1.47572 * 120.12160 * 179.97438 * 13 11 10 15 15 O 1.21582 * 120.00392 * 0.02562 * 14 13 11 16 16 N 1.34778 * 120.00098 * 180.02562 * 14 13 11 17 17 C 1.46491 * 120.00397 * 180.02562 * 16 14 13 18 18 H 1.09008 * 109.46846 * 324.99460 * 17 16 14 19 19 C 1.52999 * 109.47430 * 84.99545 * 17 16 14 20 20 C 1.53002 * 109.47307 * 180.02562 * 19 17 16 21 21 C 1.53004 * 109.47170 * 300.00464 * 20 19 17 22 22 H 1.08998 * 109.47214 * 179.97438 * 21 20 19 23 23 O 1.42904 * 109.46970 * 299.99869 * 21 20 19 24 24 C 1.52999 * 109.47384 * 59.99583 * 21 20 19 25 25 C 1.53002 * 109.47307 * 300.00333 * 24 21 20 26 26 C 1.39214 * 120.00080 * 179.68733 * 8 7 6 27 27 O 1.34337 * 125.66676 * 245.02667 * 4 2 1 28 28 H 0.96707 * 114.00043 * 299.99398 * 1 2 3 29 29 H 1.08996 * 109.47123 * 240.00126 * 2 1 3 30 30 H 1.48507 * 109.99797 * 178.68106 * 3 2 1 31 31 H 1.48500 * 110.00109 * 299.99880 * 3 2 1 32 32 H 1.07999 * 126.49249 * 0.02562 * 5 4 2 33 33 H 1.08005 * 126.63066 * 180.24087 * 6 5 4 34 34 H 1.08004 * 119.87905 * 359.97438 * 9 8 7 35 35 H 1.08006 * 119.88214 * 180.02562 * 10 9 8 36 36 H 0.96693 * 114.00159 * 89.99719 * 12 11 10 37 37 H 0.97004 * 119.99763 * 359.97438 * 16 14 13 38 38 H 1.08997 * 109.46920 * 300.00048 * 19 17 16 39 39 H 1.09000 * 109.46993 * 60.00712 * 19 17 16 40 40 H 1.08990 * 109.47274 * 180.02562 * 20 19 17 41 41 H 1.09008 * 109.47118 * 59.99824 * 20 19 17 42 42 H 0.96702 * 113.99598 * 300.00212 * 23 21 20 43 43 H 1.09002 * 109.47370 * 180.02562 * 24 21 20 44 44 H 1.09003 * 109.46749 * 60.00338 * 24 21 20 45 45 H 1.09008 * 109.47118 * 300.00176 * 25 24 21 46 46 H 1.09000 * 109.47102 * 179.97438 * 25 24 21 47 47 H 1.08001 * 120.12036 * 0.04975 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.7568 -2.0166 1.5094 6 6 2.3857 -2.2620 2.7470 7 6 2.9073 -1.0777 3.1629 8 6 3.6575 -0.8527 4.4165 9 6 3.8787 -1.9142 5.2988 10 6 4.5779 -1.7104 6.4687 11 6 5.0672 -0.4495 6.7799 12 8 5.7501 -0.2531 7.9355 13 6 4.8512 0.6227 5.9021 14 6 5.3697 1.9647 6.2305 15 8 5.9859 2.1423 7.2635 16 7 5.1603 2.9935 5.3855 17 6 5.6755 4.3256 5.7112 18 1 5.6216 4.4825 6.7885 19 6 7.1307 4.4360 5.2518 20 6 7.6690 5.8270 5.5926 21 6 6.8275 6.8881 4.8805 22 1 7.2107 7.8791 5.1236 23 8 6.8980 6.6829 3.4681 24 6 5.3722 6.7777 5.3398 25 6 4.8340 5.3866 4.9991 26 6 4.1442 0.4162 4.7183 27 8 2.6269 -0.1460 2.2317 28 1 -0.3933 0.4416 0.7651 29 1 1.7923 -0.5138 -0.8900 30 1 3.5345 1.7704 0.0321 31 1 1.5613 2.4679 -1.2085 32 1 1.2370 -2.7399 0.8987 33 1 2.4405 -3.2078 3.2657 34 1 3.5002 -2.8979 5.0627 35 1 4.7458 -2.5348 7.1459 36 1 6.7044 -0.3874 7.8561 37 1 4.6689 2.8517 4.5612 38 1 7.7302 3.6804 5.7595 39 1 7.1846 4.2791 4.1745 40 1 8.7055 5.9058 5.2650 41 1 7.6152 5.9836 6.6701 42 1 7.7932 6.7388 3.1067 43 1 4.7726 7.5333 4.8322 44 1 5.3185 6.9342 6.4172 45 1 4.8878 5.2301 3.9216 46 1 3.7974 5.3078 5.3267 47 1 3.9741 1.2378 4.0382 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_13259648.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:54:16 Heat of formation + Delta-G solvation = -115.639181 kcal Electronic energy + Delta-G solvation = -32312.695960 eV Core-core repulsion = 27814.764041 eV Total energy + Delta-G solvation = -4497.931919 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -43.72555 -41.60637 -40.44134 -39.20704 -38.14937 -37.79384 -36.56944 -34.48868 -34.12569 -32.77957 -32.44581 -31.86915 -30.10565 -29.52122 -26.42382 -25.41971 -23.84964 -23.81079 -23.26630 -22.62182 -21.61526 -21.27665 -20.84322 -19.62260 -19.13666 -18.33351 -17.86399 -17.60246 -17.51453 -17.34596 -16.71147 -16.59914 -16.27361 -16.21210 -15.91483 -15.79404 -15.57864 -15.24059 -14.70520 -14.56738 -14.36196 -14.29286 -14.08032 -13.98479 -13.91502 -13.67241 -13.41993 -13.25845 -13.24425 -13.14568 -13.03516 -12.83204 -12.48133 -12.14554 -12.07639 -11.83018 -11.60624 -11.29039 -11.07758 -10.90263 -10.70893 -10.63380 -10.46679 -10.31131 -9.97698 -8.92793 -5.11174 -0.57113 -0.22749 0.75652 1.08791 1.40347 1.48512 1.72349 1.87691 1.96062 2.08243 2.63735 3.08139 3.18107 3.24788 3.28928 3.46361 3.56130 3.68304 3.69846 3.85686 3.92945 3.95326 3.98912 4.03636 4.14439 4.18633 4.25156 4.35304 4.36377 4.44918 4.46450 4.57729 4.60671 4.61737 4.74186 4.80650 4.85615 4.89562 4.99036 5.00015 5.07856 5.12022 5.12670 5.14639 5.24272 5.33803 5.38794 5.43063 5.54075 5.96414 6.34825 6.49367 6.65968 6.66244 7.24854 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.027 4.027 3 Si 0.699 3.301 4 C -0.051 4.051 5 C -0.170 4.170 6 C -0.189 4.189 7 C 0.036 3.964 8 C -0.034 4.034 9 C -0.053 4.053 10 C -0.149 4.149 11 C 0.179 3.821 12 O -0.475 6.475 13 C -0.163 4.163 14 C 0.560 3.440 15 O -0.517 6.517 16 N -0.724 5.724 17 C 0.148 3.852 18 H 0.089 0.911 19 C -0.124 4.124 20 C -0.150 4.150 21 C 0.102 3.898 22 H 0.057 0.943 23 O -0.564 6.564 24 C -0.109 4.109 25 C -0.124 4.124 26 C -0.054 4.054 27 O -0.165 6.165 28 H 0.384 0.616 29 H 0.133 0.867 30 H -0.252 1.252 31 H -0.246 1.246 32 H 0.154 0.846 33 H 0.154 0.846 34 H 0.140 0.860 35 H 0.146 0.854 36 H 0.399 0.601 37 H 0.399 0.601 38 H 0.066 0.934 39 H 0.070 0.930 40 H 0.068 0.932 41 H 0.075 0.925 42 H 0.377 0.623 43 H 0.076 0.924 44 H 0.079 0.921 45 H 0.078 0.922 46 H 0.070 0.930 47 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.240 0.351 -1.139 1.216 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.138 4.138 3 Si 0.599 3.401 4 C -0.101 4.101 5 C -0.189 4.189 6 C -0.208 4.208 7 C -0.014 4.014 8 C -0.034 4.034 9 C -0.072 4.072 10 C -0.167 4.167 11 C 0.132 3.868 12 O -0.287 6.287 13 C -0.167 4.167 14 C 0.347 3.653 15 O -0.393 6.393 16 N -0.376 5.376 17 C 0.043 3.957 18 H 0.107 0.893 19 C -0.163 4.163 20 C -0.188 4.188 21 C 0.043 3.957 22 H 0.075 0.925 23 O -0.370 6.370 24 C -0.147 4.147 25 C -0.162 4.162 26 C -0.073 4.073 27 O -0.063 6.063 28 H 0.232 0.768 29 H 0.150 0.850 30 H -0.176 1.176 31 H -0.170 1.170 32 H 0.172 0.828 33 H 0.172 0.828 34 H 0.158 0.842 35 H 0.163 0.837 36 H 0.258 0.742 37 H 0.234 0.766 38 H 0.084 0.916 39 H 0.089 0.911 40 H 0.087 0.913 41 H 0.094 0.906 42 H 0.224 0.776 43 H 0.095 0.905 44 H 0.097 0.903 45 H 0.097 0.903 46 H 0.088 0.912 47 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.157 1.146 -1.037 1.553 hybrid contribution 0.858 -1.081 -0.752 1.572 sum 1.015 0.066 -1.789 2.058 Atomic orbital electron populations 1.86566 1.16138 1.81748 1.49142 1.24405 0.85227 1.11232 0.92925 0.94324 0.81551 0.76914 0.87326 1.22902 1.01049 0.93911 0.92260 1.21568 1.03680 0.95681 0.97979 1.21859 1.02876 0.98412 0.97615 1.20272 1.03048 0.87420 0.90691 1.17571 1.00273 0.94165 0.91428 1.21120 0.95412 0.98459 0.92169 1.21395 1.00908 0.96823 0.97600 1.18601 0.93146 0.90596 0.84441 1.84756 1.24013 1.92129 1.27764 1.20310 1.05264 0.94844 0.96296 1.17978 0.79854 0.83879 0.83543 1.90827 1.40047 1.84007 1.24459 1.46007 1.58096 1.09175 1.24327 1.21012 0.93141 0.80739 1.00766 0.89343 1.21812 0.95622 0.96852 1.02004 1.22220 0.99579 0.95359 1.01686 1.21816 0.96102 0.96716 0.81085 0.92467 1.86506 1.33798 1.95203 1.21452 1.21494 0.94578 0.97172 1.01406 1.21730 0.99011 0.93784 1.01681 1.21310 0.94383 0.96592 0.94968 1.83913 1.57946 1.37943 1.26463 0.76821 0.84995 1.17597 1.17016 0.82838 0.82809 0.84245 0.83670 0.74216 0.76615 0.91551 0.91107 0.91318 0.90637 0.77581 0.90547 0.90257 0.90325 0.91172 0.84630 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.37 12.88 -35.23 -0.45 -0.09 16 2 C -0.03 0.02 2.98 36.01 0.11 0.13 16 3 Si 0.70 -0.96 32.11 -169.99 -5.46 -6.42 16 4 C -0.05 -0.02 6.20 -35.56 -0.22 -0.24 16 5 C -0.17 -0.08 10.78 -39.80 -0.43 -0.51 16 6 C -0.19 -0.02 10.26 -39.37 -0.40 -0.42 16 7 C 0.04 0.02 7.03 -36.49 -0.26 -0.23 16 8 C -0.03 0.00 5.87 -105.03 -0.62 -0.62 16 9 C -0.05 0.06 9.54 -39.16 -0.37 -0.31 16 10 C -0.15 0.10 9.96 -39.54 -0.39 -0.30 16 11 C 0.18 0.24 6.72 -38.63 -0.26 -0.02 16 12 O -0.48 -0.99 11.55 -40.63 -0.47 -1.46 16 13 C -0.16 -0.23 5.88 -104.90 -0.62 -0.85 16 14 C 0.56 1.54 7.73 -12.45 -0.10 1.45 16 15 O -0.52 -3.08 14.81 -16.66 -0.25 -3.33 16 16 N -0.72 -0.20 5.03 -54.84 -0.28 -0.48 16 17 C 0.15 0.04 2.45 -67.93 -0.17 -0.12 16 18 H 0.09 0.18 7.58 -51.92 -0.39 -0.22 16 19 C -0.12 -0.02 5.35 -26.73 -0.14 -0.17 16 20 C -0.15 0.16 5.64 -26.73 -0.15 0.01 16 21 C 0.10 -0.12 3.77 -26.73 -0.10 -0.22 16 22 H 0.06 -0.10 8.14 -51.93 -0.42 -0.53 16 23 O -0.56 0.26 11.97 -35.23 -0.42 -0.16 16 24 C -0.11 0.13 5.66 -26.73 -0.15 -0.02 16 25 C -0.12 0.12 5.25 -26.73 -0.14 -0.02 16 26 C -0.05 0.00 9.20 -38.78 -0.36 -0.35 16 27 O -0.17 -0.11 8.80 4.60 0.04 -0.07 16 28 H 0.38 -1.69 8.70 45.56 0.40 -1.29 16 29 H 0.13 -0.16 7.96 -51.93 -0.41 -0.58 16 30 H -0.25 -0.35 7.11 56.52 0.40 0.06 16 31 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 32 H 0.15 -0.08 8.06 -52.49 -0.42 -0.50 16 33 H 0.15 -0.31 7.25 -52.48 -0.38 -0.69 16 34 H 0.14 -0.46 6.96 -52.48 -0.37 -0.82 16 35 H 0.15 -0.35 8.06 -52.48 -0.42 -0.78 16 36 H 0.40 -0.65 9.06 45.56 0.41 -0.24 16 37 H 0.40 -0.72 6.63 -40.82 -0.27 -0.99 16 38 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 39 H 0.07 0.03 7.68 -51.93 -0.40 -0.37 16 40 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.07 -0.07 8.14 -51.92 -0.42 -0.49 16 42 H 0.38 -1.37 9.08 45.56 0.41 -0.96 16 43 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 44 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 45 H 0.08 -0.04 7.68 -51.92 -0.40 -0.44 16 46 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 47 H 0.14 -0.25 6.24 -52.49 -0.33 -0.58 16 LS Contribution 389.55 15.07 5.87 5.87 Total: 0.00 -9.79 389.55 -10.91 -20.70 By element: Atomic # 1 Polarization: -7.02 SS G_CDS: -4.73 Total: -11.75 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -4.77 Total: -2.82 kcal Atomic # 7 Polarization: -0.20 SS G_CDS: -0.28 Total: -0.48 kcal Atomic # 8 Polarization: -3.56 SS G_CDS: -1.55 Total: -5.11 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.46 Total: -6.42 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -9.79 -10.91 -20.70 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_13259648.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.934 kcal (2) G-P(sol) polarization free energy of solvation -9.795 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.729 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.910 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.705 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.639 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds