Wall clock time and date at job start Sat Mar 6 2021 23:54:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86302 * 109.47330 * 2 1 4 4 C 1.50709 * 109.46950 * 119.99825 * 2 1 3 5 5 C 1.34187 * 126.53673 * 255.02108 * 4 2 1 6 6 N 1.36869 * 109.96748 * 179.97438 * 5 4 2 7 7 C 1.37405 * 109.97590 * 0.02562 * 6 5 4 8 8 C 1.39328 * 133.24937 * 179.97438 * 7 6 5 9 9 C 1.36344 * 120.23836 * 180.02562 * 8 7 6 10 10 C 1.40174 * 120.66883 * 0.02562 * 9 8 7 11 11 C 1.47653 * 119.97219 * 179.97438 * 10 9 8 12 12 O 1.21576 * 119.99603 * 180.02562 * 11 10 9 13 13 N 1.34779 * 120.00318 * 359.97438 * 11 10 9 14 14 C 1.46495 * 119.99829 * 180.02562 * 13 11 10 15 15 H 1.08997 * 109.47543 * 325.00343 * 14 13 11 16 16 C 1.52999 * 109.47207 * 85.00299 * 14 13 11 17 17 C 1.53001 * 109.47385 * 179.97438 * 16 14 13 18 18 C 1.53001 * 109.47313 * 300.00387 * 17 16 14 19 19 H 1.08998 * 109.46923 * 179.97438 * 18 17 16 20 20 O 1.42899 * 109.46980 * 299.99831 * 18 17 16 21 21 C 1.52998 * 109.46931 * 59.99762 * 18 17 16 22 22 C 1.53001 * 109.46903 * 205.00327 * 14 13 11 23 23 C 1.39182 * 120.05206 * 359.95828 * 10 9 8 24 24 C 1.39232 * 119.39274 * 0.04621 * 23 10 9 25 25 H 0.96703 * 114.00117 * 60.00270 * 1 2 3 26 26 H 1.09001 * 109.47652 * 239.99670 * 2 1 3 27 27 H 1.48506 * 109.99427 * 298.68008 * 3 2 1 28 28 H 1.48490 * 110.00030 * 59.99545 * 3 2 1 29 29 H 1.08007 * 125.01842 * 0.02562 * 5 4 2 30 30 H 0.96993 * 125.01185 * 180.26933 * 6 5 4 31 31 H 1.08007 * 119.87954 * 359.97438 * 8 7 6 32 32 H 1.08001 * 119.66848 * 180.02562 * 9 8 7 33 33 H 0.96995 * 119.99752 * 0.02562 * 13 11 10 34 34 H 1.08996 * 109.47254 * 299.99755 * 16 14 13 35 35 H 1.09010 * 109.47008 * 59.99654 * 16 14 13 36 36 H 1.08999 * 109.47251 * 179.97438 * 17 16 14 37 37 H 1.09010 * 109.46831 * 60.00156 * 17 16 14 38 38 H 0.96707 * 113.99976 * 299.99712 * 20 18 17 39 39 H 1.09004 * 109.46924 * 180.02562 * 21 18 17 40 40 H 1.09002 * 109.47601 * 60.00325 * 21 18 17 41 41 H 1.09001 * 109.47027 * 299.99572 * 22 14 13 42 42 H 1.08999 * 109.47295 * 60.00088 * 22 14 13 43 43 H 1.07999 * 120.30682 * 180.02562 * 23 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.4602 -0.1386 2.3232 6 7 2.8018 -1.1003 3.2351 7 6 2.4950 -2.3454 2.7416 8 6 2.6341 -3.6349 3.2505 9 6 2.2313 -4.7103 2.5155 10 6 1.6737 -4.5369 1.2412 11 6 1.2432 -5.7125 0.4583 12 8 0.7599 -5.5627 -0.6472 13 7 1.3870 -6.9516 0.9686 14 6 0.9604 -8.1178 0.1915 15 1 0.0723 -7.8639 -0.3872 16 6 2.0847 -8.5373 -0.7576 17 6 1.6395 -9.7558 -1.5688 18 6 1.3165 -10.9107 -0.6187 19 1 0.9989 -11.7786 -1.1967 20 8 2.4810 -11.2433 0.1399 21 6 0.1922 -10.4912 0.3303 22 6 0.6372 -9.2730 1.1413 23 6 1.5251 -3.2576 0.7135 24 6 1.9357 -2.1578 1.4620 25 1 -0.3933 0.4417 -0.7651 26 1 1.7924 -0.5139 -0.8899 27 1 1.5878 2.4585 -1.2243 28 1 1.5614 2.4679 1.2084 29 1 2.5957 0.9239 2.4627 30 1 3.1985 -0.9280 4.1033 31 1 3.0633 -3.7832 4.2305 32 1 2.3431 -5.7058 2.9191 33 1 1.7729 -7.0711 1.8504 34 1 2.3150 -7.7144 -1.4342 35 1 2.9729 -8.7913 -0.1789 36 1 2.4403 -10.0543 -2.2453 37 1 0.7512 -9.5021 -2.1475 38 1 3.2356 -11.5190 -0.3984 39 1 -0.0376 -11.3139 1.0075 40 1 -0.6961 -10.2376 -0.2483 41 1 1.5253 -9.5271 1.7198 42 1 -0.1638 -8.9742 1.8174 43 1 1.0956 -3.1193 -0.2677 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_13287722.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:54:19 Heat of formation + Delta-G solvation = -61.189551 kcal Electronic energy + Delta-G solvation = -26201.599663 eV Core-core repulsion = 22406.193470 eV Total energy + Delta-G solvation = -3795.406193 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -42.42233 -41.01687 -39.65748 -37.88861 -37.43904 -36.53639 -34.21272 -33.32588 -31.81458 -31.06707 -30.59324 -29.22560 -26.41554 -24.93067 -23.78934 -23.41098 -22.92303 -21.31270 -20.94373 -20.40335 -19.04150 -18.42514 -18.37430 -17.77396 -17.51571 -16.90273 -16.61358 -15.96598 -15.82523 -15.57934 -15.54159 -15.16961 -14.98561 -14.73455 -14.69529 -14.38310 -14.10240 -14.04044 -13.72760 -13.50332 -13.34698 -13.18967 -12.99099 -12.70814 -12.49892 -12.42876 -12.09253 -12.00931 -11.75645 -11.53450 -11.23439 -10.88105 -10.72046 -10.60362 -10.33326 -9.91844 -9.26135 -8.77480 -4.96240 0.00878 0.24996 1.30078 1.50298 1.58836 1.94526 2.03087 2.07450 2.26127 3.02361 3.30018 3.51819 3.61891 3.70748 3.74305 3.76246 3.92485 3.96423 4.01028 4.08789 4.16602 4.25034 4.29861 4.42083 4.44093 4.50740 4.52100 4.54834 4.63392 4.68789 4.82135 4.92023 4.95693 5.05163 5.07139 5.18090 5.18776 5.30402 5.32003 5.40495 5.44999 5.54873 5.65038 5.67375 6.03483 6.41452 6.56770 6.66143 6.70852 7.41362 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.043 4.043 3 Si 0.683 3.317 4 C -0.145 4.145 5 C 0.064 3.936 6 N -0.585 5.585 7 C 0.119 3.881 8 C -0.133 4.133 9 C -0.067 4.067 10 C -0.169 4.169 11 C 0.565 3.435 12 O -0.540 6.540 13 N -0.724 5.724 14 C 0.147 3.853 15 H 0.087 0.913 16 C -0.125 4.125 17 C -0.150 4.150 18 C 0.102 3.898 19 H 0.057 0.943 20 O -0.564 6.564 21 C -0.109 4.109 22 C -0.123 4.123 23 C 0.008 3.992 24 C -0.102 4.102 25 H 0.377 0.623 26 H 0.074 0.926 27 H -0.260 1.260 28 H -0.255 1.255 29 H 0.176 0.824 30 H 0.422 0.578 31 H 0.128 0.872 32 H 0.128 0.872 33 H 0.399 0.601 34 H 0.067 0.933 35 H 0.070 0.930 36 H 0.068 0.932 37 H 0.074 0.926 38 H 0.377 0.623 39 H 0.075 0.925 40 H 0.079 0.921 41 H 0.077 0.923 42 H 0.068 0.932 43 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.384 0.115 2.266 4.936 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.153 4.153 3 Si 0.584 3.416 4 C -0.152 4.152 5 C -0.063 4.063 6 N -0.187 5.187 7 C 0.010 3.990 8 C -0.154 4.154 9 C -0.087 4.087 10 C -0.173 4.173 11 C 0.354 3.646 12 O -0.418 6.418 13 N -0.376 5.376 14 C 0.043 3.957 15 H 0.105 0.895 16 C -0.163 4.163 17 C -0.189 4.189 18 C 0.043 3.957 19 H 0.075 0.925 20 O -0.370 6.370 21 C -0.147 4.147 22 C -0.161 4.161 23 C -0.012 4.012 24 C -0.107 4.107 25 H 0.225 0.775 26 H 0.092 0.908 27 H -0.184 1.184 28 H -0.179 1.179 29 H 0.193 0.807 30 H 0.259 0.741 31 H 0.146 0.854 32 H 0.146 0.854 33 H 0.234 0.766 34 H 0.086 0.914 35 H 0.089 0.911 36 H 0.087 0.913 37 H 0.093 0.907 38 H 0.224 0.776 39 H 0.094 0.906 40 H 0.097 0.903 41 H 0.096 0.904 42 H 0.087 0.913 43 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 3.562 0.967 2.630 4.532 hybrid contribution -0.370 -0.240 -0.144 0.464 sum 3.192 0.726 2.486 4.111 Atomic orbital electron populations 1.86635 1.18102 1.80024 1.49499 1.24081 0.84058 1.10013 0.97122 0.95260 0.91419 0.74320 0.80608 1.19516 1.07892 0.91208 0.96599 1.21672 1.01185 0.94352 0.89082 1.41704 1.54923 1.04126 1.17953 1.18417 0.99948 0.86523 0.94087 1.19661 1.05782 0.88813 1.01117 1.20588 0.96737 0.98352 0.93002 1.19556 1.08194 0.93273 0.96302 1.18179 0.77808 0.82908 0.85714 1.90779 1.44634 1.86122 1.20238 1.45959 1.64851 1.05602 1.21158 1.20985 0.97843 0.84283 0.92613 0.89487 1.21816 0.98726 0.97445 0.98327 1.22222 1.02442 0.95986 0.98212 1.21808 0.86407 0.95469 0.91983 0.92518 1.86503 1.23403 1.89340 1.37734 1.21488 0.96750 0.97917 0.98522 1.21712 1.02407 0.93983 0.98038 1.20653 0.92505 0.89212 0.98820 1.18917 1.04500 0.92894 0.94380 0.77485 0.90805 1.18431 1.17925 0.80669 0.74066 0.85415 0.85397 0.76583 0.91449 0.91094 0.91319 0.90691 0.77575 0.90640 0.90293 0.90393 0.91316 0.84551 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.33 12.86 -35.23 -0.45 -1.78 16 2 C -0.04 -0.04 3.05 36.01 0.11 0.07 16 3 Si 0.68 -0.77 30.80 -169.99 -5.23 -6.01 16 4 C -0.15 -0.29 5.61 -102.69 -0.58 -0.87 16 5 C 0.06 -0.02 10.43 -16.73 -0.17 -0.19 16 6 N -0.58 0.52 6.05 -10.61 -0.06 0.45 16 7 C 0.12 0.17 7.27 -83.96 -0.61 -0.44 16 8 C -0.13 -0.01 10.00 -39.86 -0.40 -0.41 16 9 C -0.07 -0.03 9.46 -39.54 -0.37 -0.40 16 10 C -0.17 -0.51 5.87 -104.98 -0.62 -1.13 16 11 C 0.57 2.32 7.73 -12.42 -0.10 2.22 16 12 O -0.54 -4.14 15.99 5.30 0.08 -4.06 16 13 N -0.72 -0.84 5.03 -54.81 -0.28 -1.12 16 14 C 0.15 0.17 2.45 -67.93 -0.17 0.00 16 15 H 0.09 0.26 7.58 -51.93 -0.39 -0.14 16 16 C -0.12 -0.12 5.35 -26.73 -0.14 -0.27 16 17 C -0.15 0.07 5.64 -26.73 -0.15 -0.08 16 18 C 0.10 -0.07 3.77 -26.73 -0.10 -0.17 16 19 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 20 O -0.56 0.01 11.97 -35.23 -0.42 -0.41 16 21 C -0.11 0.06 5.66 -26.75 -0.15 -0.09 16 22 C -0.12 0.03 5.24 -26.75 -0.14 -0.11 16 23 C 0.01 0.03 9.64 -38.86 -0.37 -0.34 16 24 C -0.10 -0.34 6.34 -105.16 -0.67 -1.01 16 25 H 0.38 -0.59 8.74 45.56 0.40 -0.19 16 26 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 27 H -0.26 -0.31 7.11 56.52 0.40 0.10 16 28 H -0.25 -0.29 7.04 56.52 0.40 0.10 16 29 H 0.18 -0.53 6.30 -52.48 -0.33 -0.86 16 30 H 0.42 -1.74 8.96 -40.82 -0.37 -2.10 16 31 H 0.13 -0.31 8.06 -52.48 -0.42 -0.74 16 32 H 0.13 -0.32 6.36 -52.49 -0.33 -0.65 16 33 H 0.40 -0.52 6.60 -40.82 -0.27 -0.79 16 34 H 0.07 0.20 8.14 -51.93 -0.42 -0.23 16 35 H 0.07 0.07 7.68 -51.92 -0.40 -0.33 16 36 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 37 H 0.07 -0.02 8.14 -51.92 -0.42 -0.44 16 38 H 0.38 -1.25 9.08 45.56 0.41 -0.83 16 39 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 40 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 41 H 0.08 0.01 7.68 -51.93 -0.40 -0.39 16 42 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 43 H 0.14 0.66 7.64 -52.49 -0.40 0.26 16 LS Contribution 350.02 15.07 5.27 5.27 Total: 0.00 -10.14 350.02 -10.80 -20.94 By element: Atomic # 1 Polarization: -5.00 SS G_CDS: -5.08 Total: -10.07 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -4.63 Total: -3.21 kcal Atomic # 7 Polarization: -0.33 SS G_CDS: -0.34 Total: -0.67 kcal Atomic # 8 Polarization: -5.46 SS G_CDS: -0.79 Total: -6.25 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.23 Total: -6.01 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -10.14 -10.80 -20.94 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_13287722.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.248 kcal (2) G-P(sol) polarization free energy of solvation -10.143 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.392 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.798 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.941 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.190 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds