Wall clock time and date at job start Sat Mar 6 2021 23:54:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86305 * 109.46988 * 2 1 4 4 C 1.50699 * 109.47005 * 240.00060 * 2 1 3 5 5 C 1.38585 * 120.32389 * 299.99752 * 4 2 1 6 6 C 1.38628 * 118.49006 * 179.72562 * 5 4 2 7 7 C 1.39275 * 119.06101 * 0.02562 * 6 5 4 8 8 C 1.48163 * 119.72455 * 180.02562 * 7 6 5 9 9 O 1.21513 * 119.99782 * 359.97438 * 8 7 6 10 10 N 1.34775 * 120.00058 * 179.97438 * 8 7 6 11 11 C 1.46504 * 119.99861 * 179.97438 * 10 8 7 12 12 H 1.09001 * 109.47188 * 325.00139 * 11 10 8 13 13 C 1.52994 * 109.46970 * 85.00609 * 11 10 8 14 14 C 1.52998 * 109.47251 * 180.02562 * 13 11 10 15 15 C 1.53006 * 109.46723 * 299.99592 * 14 13 11 16 16 H 1.08997 * 109.47270 * 180.02562 * 15 14 13 17 17 O 1.42903 * 109.46844 * 299.99938 * 15 14 13 18 18 C 1.52996 * 109.47136 * 59.99892 * 15 14 13 19 19 C 1.52999 * 109.46830 * 205.00329 * 11 10 8 20 20 N 1.32747 * 120.55344 * 359.97438 * 7 6 5 21 21 C 1.31502 * 121.64467 * 0.02562 * 20 7 6 22 22 H 0.96700 * 113.99711 * 59.99928 * 1 2 3 23 23 H 1.09001 * 109.47051 * 119.99381 * 2 1 3 24 24 H 1.48493 * 110.00025 * 60.00256 * 3 2 1 25 25 H 1.48502 * 109.99867 * 181.31998 * 3 2 1 26 26 H 1.07998 * 120.75237 * 359.74957 * 5 4 2 27 27 H 1.07997 * 120.47286 * 180.02562 * 6 5 4 28 28 H 0.97000 * 120.00112 * 0.02562 * 10 8 7 29 29 H 1.09009 * 109.46900 * 299.99506 * 13 11 10 30 30 H 1.09001 * 109.47549 * 59.99751 * 13 11 10 31 31 H 1.08996 * 109.47484 * 180.02562 * 14 13 11 32 32 H 1.09001 * 109.47783 * 59.99153 * 14 13 11 33 33 H 0.96699 * 114.00479 * 300.00071 * 17 15 14 34 34 H 1.09003 * 109.47103 * 179.97438 * 18 15 14 35 35 H 1.09001 * 109.47185 * 60.00091 * 18 15 14 36 36 H 1.09001 * 109.47080 * 299.99876 * 19 11 10 37 37 H 1.08996 * 109.47689 * 60.00022 * 19 11 10 38 38 H 1.07997 * 119.55004 * 180.02562 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6006 -2.0371 -1.4564 6 6 2.0786 -2.6516 -2.6035 7 6 2.8706 -1.9185 -3.4838 8 6 3.3888 -2.5605 -4.7145 9 8 3.1227 -3.7221 -4.9520 10 7 4.1553 -1.8561 -5.5705 11 6 4.6681 -2.4911 -6.7871 12 1 4.8954 -3.5374 -6.5827 13 6 3.6126 -2.4047 -7.8912 14 6 4.1479 -3.0684 -9.1616 15 6 5.4203 -2.3497 -9.6150 16 1 5.8015 -2.8222 -10.5203 17 8 5.1227 -0.9780 -9.8833 18 6 6.4759 -2.4361 -8.5109 19 6 5.9403 -1.7720 -7.2402 20 7 3.1642 -0.6490 -3.2300 21 6 2.7242 -0.0417 -2.1498 22 1 -0.3933 0.4417 -0.7651 23 1 1.7923 -0.5137 0.8900 24 1 1.5615 2.4679 1.2085 25 1 3.5346 1.7703 -0.0321 26 1 0.9843 -2.5798 -0.7550 27 1 1.8402 -3.6842 -2.8115 28 1 4.3680 -0.9289 -5.3807 29 1 2.7063 -2.9170 -7.5683 30 1 3.3854 -1.3584 -8.0956 31 1 3.3962 -3.0064 -9.9484 32 1 4.3749 -4.1147 -8.9570 33 1 4.4594 -0.8474 -10.5747 34 1 7.3825 -1.9245 -8.8341 35 1 6.7028 -3.4824 -8.3062 36 1 5.7130 -0.7257 -7.4446 37 1 6.6923 -1.8335 -6.4536 38 1 2.9835 0.9923 -1.9772 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_13287726.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:54:22 Heat of formation + Delta-G solvation = -84.885967 kcal Electronic energy + Delta-G solvation = -21646.205833 eV Core-core repulsion = 18261.761987 eV Total energy + Delta-G solvation = -3384.443846 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 279.130 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -41.88471 -40.74541 -39.50305 -37.97286 -36.65773 -34.48063 -33.59574 -32.97239 -31.85130 -29.89010 -27.64817 -25.04940 -24.27810 -23.81315 -22.95952 -21.55794 -20.99122 -19.18314 -18.66252 -17.88159 -17.74537 -17.05666 -16.75415 -16.58618 -16.23306 -16.11943 -15.96126 -15.59902 -15.10602 -14.59972 -14.42225 -14.34717 -14.30270 -14.01252 -13.59407 -13.47054 -13.23217 -13.04523 -12.65528 -12.47379 -12.16556 -12.06190 -11.59860 -11.35896 -11.22901 -11.08789 -10.80381 -10.69562 -10.58786 -10.29298 -9.97005 -5.18612 -0.56791 0.05238 1.09019 1.47817 1.66672 1.84061 2.03786 2.71393 2.94641 3.23762 3.27401 3.41979 3.59534 3.68659 3.69912 3.77979 3.92283 3.97091 4.03875 4.13423 4.20168 4.29072 4.37574 4.46416 4.47060 4.52279 4.63056 4.81653 4.88057 4.91481 4.95649 5.01670 5.13508 5.15408 5.25780 5.34908 5.35063 5.54648 6.34951 6.38273 6.66072 6.69036 7.18591 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.067 4.067 3 Si 0.688 3.312 4 C -0.151 4.151 5 C -0.053 4.053 6 C -0.108 4.108 7 C 0.080 3.920 8 C 0.572 3.428 9 O -0.530 6.530 10 N -0.705 5.705 11 C 0.144 3.856 12 H 0.088 0.912 13 C -0.125 4.125 14 C -0.150 4.150 15 C 0.102 3.898 16 H 0.057 0.943 17 O -0.564 6.564 18 C -0.109 4.109 19 C -0.123 4.123 20 N -0.452 5.452 21 C 0.103 3.897 22 H 0.381 0.619 23 H 0.121 0.879 24 H -0.249 1.249 25 H -0.252 1.252 26 H 0.148 0.852 27 H 0.152 0.848 28 H 0.412 0.588 29 H 0.066 0.934 30 H 0.072 0.928 31 H 0.069 0.931 32 H 0.075 0.925 33 H 0.377 0.623 34 H 0.076 0.924 35 H 0.079 0.921 36 H 0.079 0.921 37 H 0.069 0.931 38 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.449 2.590 -1.829 3.202 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.178 4.178 3 Si 0.589 3.411 4 C -0.153 4.153 5 C -0.079 4.079 6 C -0.129 4.129 7 C -0.058 4.058 8 C 0.357 3.643 9 O -0.406 6.406 10 N -0.356 5.356 11 C 0.040 3.960 12 H 0.106 0.894 13 C -0.163 4.163 14 C -0.188 4.188 15 C 0.043 3.957 16 H 0.075 0.925 17 O -0.369 6.369 18 C -0.147 4.147 19 C -0.161 4.161 20 N -0.163 5.163 21 C -0.057 4.057 22 H 0.229 0.771 23 H 0.138 0.862 24 H -0.173 1.173 25 H -0.177 1.177 26 H 0.165 0.835 27 H 0.170 0.830 28 H 0.248 0.752 29 H 0.085 0.915 30 H 0.091 0.909 31 H 0.088 0.912 32 H 0.093 0.907 33 H 0.224 0.776 34 H 0.094 0.906 35 H 0.097 0.903 36 H 0.098 0.902 37 H 0.087 0.913 38 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 0.927 2.552 -1.185 2.962 hybrid contribution -0.806 -0.786 0.453 1.213 sum 0.121 1.766 -0.732 1.916 Atomic orbital electron populations 1.86535 1.16605 1.81661 1.49351 1.25046 0.85583 1.10431 0.96758 0.94753 0.81190 0.77280 0.87882 1.21660 0.99208 0.96060 0.98412 1.21550 0.96402 0.93644 0.96308 1.22228 0.95332 1.02075 0.93256 1.21197 0.97877 0.90686 0.95990 1.17856 0.78639 0.85623 0.82182 1.90809 1.58248 1.16146 1.75403 1.45912 1.51153 1.16361 1.22157 1.21077 0.93400 0.98178 0.83306 0.89394 1.21815 0.98436 1.01935 0.94130 1.22222 0.98006 1.00594 0.98013 1.21814 0.94360 0.82344 0.97190 0.92459 1.86509 1.64014 1.25131 1.61284 1.21504 0.97912 1.01541 0.93708 1.21721 0.95931 1.01026 0.97423 1.67523 1.20106 1.09203 1.19505 1.22632 0.94143 0.99670 0.89211 0.77124 0.86208 1.17347 1.17719 0.83462 0.82998 0.75220 0.91501 0.90917 0.91238 0.90658 0.77554 0.90552 0.90291 0.90191 0.91261 0.81935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.70 12.78 -35.23 -0.45 0.25 16 2 C -0.07 0.12 2.83 36.01 0.10 0.22 16 3 Si 0.69 -1.76 29.82 -169.99 -5.07 -6.83 16 4 C -0.15 0.15 5.40 -104.36 -0.56 -0.42 16 5 C -0.05 0.02 9.76 -39.31 -0.38 -0.36 16 6 C -0.11 -0.12 9.63 -39.05 -0.38 -0.49 16 7 C 0.08 0.17 6.75 -83.01 -0.56 -0.39 16 8 C 0.57 1.88 7.78 -12.19 -0.09 1.79 16 9 O -0.53 -3.19 15.99 5.35 0.09 -3.11 16 10 N -0.71 -0.89 5.07 -54.65 -0.28 -1.16 16 11 C 0.14 0.11 2.45 -67.93 -0.17 -0.06 16 12 H 0.09 0.18 7.58 -51.93 -0.39 -0.21 16 13 C -0.12 -0.06 5.35 -26.74 -0.14 -0.21 16 14 C -0.15 0.14 5.64 -26.73 -0.15 -0.01 16 15 C 0.10 -0.10 3.77 -26.73 -0.10 -0.20 16 16 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 17 O -0.56 0.13 11.97 -35.23 -0.42 -0.29 16 18 C -0.11 0.09 5.67 -26.71 -0.15 -0.06 16 19 C -0.12 0.05 5.25 -26.71 -0.14 -0.09 16 20 N -0.45 -0.53 9.54 -9.80 -0.09 -0.63 16 21 C 0.10 -0.06 9.84 -17.56 -0.17 -0.24 16 22 H 0.38 -1.93 8.70 45.56 0.40 -1.53 16 23 H 0.12 -0.19 7.96 -51.93 -0.41 -0.61 16 24 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 25 H -0.25 0.08 7.11 56.52 0.40 0.49 16 26 H 0.15 -0.25 8.06 -52.49 -0.42 -0.67 16 27 H 0.15 0.12 7.64 -52.49 -0.40 -0.29 16 28 H 0.41 0.04 7.93 -40.82 -0.32 -0.29 16 29 H 0.07 0.15 8.14 -51.92 -0.42 -0.28 16 30 H 0.07 0.05 7.68 -51.93 -0.40 -0.35 16 31 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 32 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 33 H 0.38 -1.33 9.08 45.56 0.41 -0.92 16 34 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 35 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 36 H 0.08 0.02 7.68 -51.93 -0.40 -0.38 16 37 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 38 H 0.16 -0.49 4.89 -52.49 -0.26 -0.74 16 LS Contribution 313.70 15.07 4.73 4.73 Total: 0.00 -7.40 313.70 -8.76 -16.16 By element: Atomic # 1 Polarization: -4.25 SS G_CDS: -4.36 Total: -8.61 kcal Atomic # 6 Polarization: 2.39 SS G_CDS: -2.90 Total: -0.51 kcal Atomic # 7 Polarization: -1.42 SS G_CDS: -0.37 Total: -1.79 kcal Atomic # 8 Polarization: -2.36 SS G_CDS: -0.79 Total: -3.15 kcal Atomic # 14 Polarization: -1.76 SS G_CDS: -5.07 Total: -6.83 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -7.40 -8.76 -16.16 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_13287726.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.728 kcal (2) G-P(sol) polarization free energy of solvation -7.402 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.130 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.756 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.158 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.886 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds