Wall clock time and date at job start Sat Mar 6 2021 23:54:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.38973 * 119.95580 * 2 1 4 4 O 1.35709 * 119.91210 * 359.97438 * 3 2 1 5 5 C 1.39020 * 120.17708 * 179.97438 * 3 2 1 6 6 C 1.50698 * 119.95651 * 179.97438 * 5 3 2 7 7 O 1.42908 * 109.46960 * 75.00667 * 6 5 3 8 8 Si 1.86296 * 109.47431 * 195.00346 * 6 5 3 9 9 C 1.37679 * 120.08691 * 0.02936 * 5 3 2 10 10 C 1.39752 * 119.91453 * 359.75803 * 9 5 3 11 11 C 1.47598 * 120.09268 * 180.25840 * 10 9 5 12 12 O 1.21592 * 119.99948 * 0.20708 * 11 10 9 13 13 N 1.34770 * 120.00524 * 180.21514 * 11 10 9 14 14 C 1.46495 * 120.00622 * 179.97438 * 13 11 10 15 15 H 1.08997 * 109.47058 * 324.99865 * 14 13 11 16 16 C 1.53000 * 109.47294 * 84.99327 * 14 13 11 17 17 C 1.53000 * 109.47261 * 180.02562 * 16 14 13 18 18 C 1.52999 * 109.47125 * 300.00064 * 17 16 14 19 19 H 1.09003 * 109.46902 * 180.02562 * 18 17 16 20 20 O 1.42904 * 109.47252 * 299.99987 * 18 17 16 21 21 C 1.52997 * 109.47088 * 60.00214 * 18 17 16 22 22 C 1.52998 * 109.47706 * 204.99630 * 14 13 11 23 23 C 1.37726 * 119.95713 * 180.02562 * 2 1 3 24 24 H 1.09005 * 109.47213 * 269.97922 * 1 2 3 25 25 H 1.08999 * 109.47624 * 29.98092 * 1 2 3 26 26 H 1.09003 * 109.47027 * 149.97990 * 1 2 3 27 27 H 0.96703 * 114.00017 * 89.99751 * 4 3 2 28 28 H 1.09002 * 109.47572 * 315.01260 * 6 5 3 29 29 H 0.96698 * 113.99529 * 59.99375 * 7 6 5 30 30 H 1.48498 * 110.00237 * 180.02562 * 8 6 5 31 31 H 1.48496 * 110.00155 * 301.32516 * 8 6 5 32 32 H 1.08005 * 120.04170 * 179.97438 * 9 5 3 33 33 H 0.97006 * 119.99609 * 359.97438 * 13 11 10 34 34 H 1.08997 * 109.47329 * 300.00498 * 16 14 13 35 35 H 1.09002 * 109.47050 * 60.00140 * 16 14 13 36 36 H 1.09008 * 109.47044 * 180.02562 * 17 16 14 37 37 H 1.08997 * 109.47311 * 60.00404 * 17 16 14 38 38 H 0.96696 * 114.00050 * 300.00037 * 20 18 17 39 39 H 1.08997 * 109.47314 * 179.97438 * 21 18 17 40 40 H 1.08996 * 109.47675 * 59.99801 * 21 18 17 41 41 H 1.08997 * 109.47054 * 300.00238 * 22 14 13 42 42 H 1.08999 * 109.46923 * 59.99605 * 22 14 13 43 43 H 1.08002 * 120.04103 * 359.97419 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5196 2.3778 -0.0005 5 6 3.5911 1.2095 0.0005 6 6 4.3385 2.5180 0.0000 7 8 4.2716 3.1054 1.3010 8 14 6.1199 2.2155 -0.4538 9 6 4.2859 0.0208 0.0005 10 6 3.5918 -1.1922 0.0050 11 6 4.3327 -2.4687 0.0107 12 8 5.5486 -2.4659 0.0152 13 7 3.6616 -3.6374 0.0106 14 6 4.3970 -4.9044 0.0157 15 1 5.3095 -4.7973 -0.5708 16 6 4.7568 -5.2795 1.4547 17 6 5.5254 -6.6025 1.4599 18 6 4.6533 -7.7014 0.8493 19 1 5.2007 -8.6440 0.8535 20 8 3.4570 -7.8424 1.6182 21 6 4.2935 -7.3263 -0.5897 22 6 3.5245 -6.0031 -0.5947 23 6 2.1947 -1.1933 -0.0005 24 1 -0.3634 -0.0004 1.0277 25 1 -0.3634 0.8901 -0.5135 26 1 -0.3633 -0.8898 -0.5142 27 1 1.3218 2.7181 0.8827 28 1 3.8879 3.1936 -0.7272 29 1 4.6550 2.5579 1.9998 30 1 6.8680 3.4983 -0.4573 31 1 6.7367 1.2710 0.5118 32 1 5.3659 0.0259 0.0005 33 1 2.6916 -3.6397 0.0072 34 1 5.3784 -4.4969 1.8896 35 1 3.8443 -5.3867 2.0412 36 1 5.7813 -6.8699 2.4852 37 1 6.4379 -6.4949 0.8736 38 1 3.6095 -8.0801 2.5430 39 1 3.6726 -8.1093 -1.0248 40 1 5.2059 -7.2187 -1.1761 41 1 2.6120 -6.1102 -0.0083 42 1 3.2682 -5.7359 -1.6199 43 1 1.6546 -2.1286 -0.0005 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_13287732.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:54:26 Heat of formation + Delta-G solvation = -145.224574 kcal Electronic energy + Delta-G solvation = -25945.667675 eV Core-core repulsion = 22149.813450 eV Total energy + Delta-G solvation = -3795.854225 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.81128 -40.82943 -39.64166 -37.98664 -37.54163 -36.70450 -34.47036 -33.97399 -31.97269 -31.82168 -29.55907 -27.99753 -26.89324 -25.05982 -23.81201 -23.02451 -22.05318 -21.50277 -20.80683 -19.60785 -18.82830 -18.15997 -17.76637 -17.57217 -16.93178 -16.57973 -16.46925 -16.12508 -16.02205 -15.84410 -15.53460 -15.29714 -14.74958 -14.48253 -14.32785 -14.11323 -14.06126 -13.87288 -13.56507 -13.33072 -13.22237 -13.04279 -12.91875 -12.77213 -12.49580 -12.44499 -12.04898 -11.92994 -11.66180 -11.61237 -11.27183 -11.14725 -10.68834 -10.65836 -10.20873 -9.99283 -9.66399 -5.02474 -0.41693 0.05134 1.19121 1.49644 1.58360 1.82209 2.00220 2.53306 3.12401 3.31743 3.39259 3.44904 3.52778 3.66347 3.72262 3.75651 3.96584 4.01684 4.07330 4.16154 4.21975 4.36918 4.38970 4.44259 4.48437 4.50944 4.61348 4.66166 4.72138 4.81004 4.89279 4.96710 5.03325 5.03596 5.07396 5.14258 5.15091 5.19927 5.25832 5.31729 5.33875 5.47200 5.58633 6.38121 6.42290 6.69711 6.90310 7.08783 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.119 4.119 3 C 0.158 3.842 4 O -0.495 6.495 5 C -0.151 4.151 6 C -0.061 4.061 7 O -0.539 6.539 8 Si 0.743 3.257 9 C -0.065 4.065 10 C -0.151 4.151 11 C 0.559 3.441 12 O -0.578 6.578 13 N -0.708 5.708 14 C 0.146 3.854 15 H 0.070 0.930 16 C -0.120 4.120 17 C -0.147 4.147 18 C 0.104 3.896 19 H 0.066 0.934 20 O -0.578 6.578 21 C -0.113 4.113 22 C -0.114 4.114 23 C -0.055 4.055 24 H 0.084 0.916 25 H 0.072 0.928 26 H 0.085 0.915 27 H 0.412 0.588 28 H 0.127 0.873 29 H 0.385 0.615 30 H -0.289 1.289 31 H -0.290 1.290 32 H 0.132 0.868 33 H 0.413 0.587 34 H 0.042 0.958 35 H 0.073 0.927 36 H 0.076 0.924 37 H 0.071 0.929 38 H 0.390 0.610 39 H 0.078 0.922 40 H 0.084 0.916 41 H 0.078 0.922 42 H 0.076 0.924 43 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.828 -4.150 0.351 6.376 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.120 4.120 3 C 0.112 3.888 4 O -0.309 6.309 5 C -0.152 4.152 6 C -0.171 4.171 7 O -0.347 6.347 8 Si 0.649 3.351 9 C -0.084 4.084 10 C -0.154 4.154 11 C 0.347 3.653 12 O -0.459 6.459 13 N -0.359 5.359 14 C 0.042 3.958 15 H 0.089 0.911 16 C -0.158 4.158 17 C -0.186 4.186 18 C 0.045 3.955 19 H 0.084 0.916 20 O -0.386 6.386 21 C -0.151 4.151 22 C -0.152 4.152 23 C -0.073 4.073 24 H 0.102 0.898 25 H 0.090 0.910 26 H 0.104 0.896 27 H 0.272 0.728 28 H 0.145 0.855 29 H 0.234 0.766 30 H -0.217 1.217 31 H -0.217 1.217 32 H 0.149 0.851 33 H 0.251 0.749 34 H 0.061 0.939 35 H 0.092 0.908 36 H 0.095 0.905 37 H 0.090 0.910 38 H 0.239 0.761 39 H 0.096 0.904 40 H 0.103 0.897 41 H 0.097 0.903 42 H 0.095 0.905 43 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -3.690 -3.528 -0.903 5.184 hybrid contribution 0.104 0.060 2.301 2.304 sum -3.587 -3.467 1.398 5.181 Atomic orbital electron populations 1.20773 0.88208 1.04265 1.03619 1.20446 0.98355 0.91670 1.01482 1.18434 0.88651 0.85915 0.95792 1.84628 1.75442 1.35593 1.35236 1.20493 0.94162 0.95346 1.05234 1.24834 1.09992 0.93930 0.88355 1.86577 1.82945 1.48323 1.16827 0.93928 0.73366 0.77593 0.90180 1.21108 1.00390 0.90970 0.95956 1.19805 0.94369 0.92585 1.08628 1.18401 0.86820 0.84564 0.75489 1.90782 1.15185 1.88127 1.51784 1.45897 1.11031 1.04848 1.74111 1.21030 0.95629 0.82350 0.96773 0.91135 1.21743 1.00707 0.96894 0.96474 1.22205 0.99016 0.94977 1.02360 1.21807 0.85442 0.96674 0.91551 0.91591 1.86464 1.32113 1.93025 1.26991 1.21560 1.01500 0.97098 0.94942 1.21652 0.98895 0.93206 1.01461 1.21363 0.91647 0.99057 0.95250 0.89789 0.90953 0.89628 0.72789 0.85503 0.76562 1.21659 1.21706 0.85075 0.74893 0.93892 0.90796 0.90510 0.90985 0.76067 0.90380 0.89736 0.90331 0.90528 0.82193 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.68 9.78 71.23 0.70 1.38 16 2 C -0.12 0.24 5.89 -19.81 -0.12 0.12 16 3 C 0.16 0.10 6.66 22.63 0.15 0.25 16 4 O -0.50 0.28 11.84 -90.30 -1.07 -0.79 16 5 C -0.15 -0.31 5.27 -19.81 -0.10 -0.42 16 6 C -0.06 -0.10 2.37 71.24 0.17 0.07 16 7 O -0.54 -1.29 12.88 -148.98 -1.92 -3.21 16 8 Si 0.74 2.07 30.24 68.60 2.07 4.14 16 9 C -0.07 -0.28 8.20 22.50 0.18 -0.10 16 10 C -0.15 -0.43 5.87 -20.08 -0.12 -0.55 16 11 C 0.56 3.38 7.73 86.71 0.67 4.05 16 12 O -0.58 -8.30 16.00 -4.01 -0.06 -8.37 16 13 N -0.71 0.12 5.03 -445.66 -2.24 -2.12 16 14 C 0.15 0.08 2.45 44.99 0.11 0.19 16 15 H 0.07 0.34 7.58 -2.39 -0.02 0.32 16 16 C -0.12 -0.10 5.35 30.59 0.16 0.06 16 17 C -0.15 0.32 5.64 30.59 0.17 0.49 16 18 C 0.10 -0.33 3.77 30.59 0.12 -0.22 16 19 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 20 O -0.58 1.25 11.97 -148.98 -1.78 -0.54 16 21 C -0.11 0.36 5.67 30.61 0.17 0.54 16 22 C -0.11 0.34 5.25 30.61 0.16 0.51 16 23 C -0.05 0.14 9.18 22.51 0.21 0.35 16 24 H 0.08 -0.66 8.14 -2.38 -0.02 -0.68 16 25 H 0.07 -0.31 7.52 -2.39 -0.02 -0.32 16 26 H 0.08 -0.73 8.08 -2.39 -0.02 -0.75 16 27 H 0.41 -2.92 9.06 -74.06 -0.67 -3.59 16 28 H 0.13 0.15 7.82 -2.39 -0.02 0.13 16 29 H 0.39 -1.01 8.70 -74.06 -0.64 -1.66 16 30 H -0.29 -2.52 7.11 99.48 0.71 -1.82 16 31 H -0.29 -2.42 6.68 99.48 0.66 -1.76 16 32 H 0.13 0.86 4.43 -2.91 -0.01 0.85 16 33 H 0.41 -2.54 6.62 -92.70 -0.61 -3.16 16 34 H 0.04 0.25 8.14 -2.39 -0.02 0.23 16 35 H 0.07 0.02 7.68 -2.39 -0.02 0.00 16 36 H 0.08 -0.29 8.14 -2.38 -0.02 -0.31 16 37 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 38 H 0.39 -3.32 9.08 -74.06 -0.67 -4.00 16 39 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 40 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 41 H 0.08 -0.21 7.68 -2.39 -0.02 -0.22 16 42 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 43 H 0.16 -1.46 6.39 -2.91 -0.02 -1.48 16 Total: 0.00 -19.91 346.63 -3.89 -23.81 By element: Atomic # 1 Polarization: -18.12 SS G_CDS: -1.53 Total: -19.65 kcal Atomic # 6 Polarization: 4.08 SS G_CDS: 2.63 Total: 6.71 kcal Atomic # 7 Polarization: 0.12 SS G_CDS: -2.24 Total: -2.12 kcal Atomic # 8 Polarization: -8.07 SS G_CDS: -4.84 Total: -12.90 kcal Atomic # 14 Polarization: 2.07 SS G_CDS: 2.07 Total: 4.14 kcal Total: -19.91 -3.89 -23.81 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_13287732.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.415 kcal (2) G-P(sol) polarization free energy of solvation -19.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.330 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.895 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.809 kcal (6) G-S(sol) free energy of system = (1) + (5) -145.225 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds