Wall clock time and date at job start Sat Mar 6 2021 17:55:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86294 * 109.47137 * 2 1 4 4 C 1.50703 * 109.47058 * 239.99732 * 2 1 3 5 5 C 1.38262 * 119.94992 * 300.00430 * 4 2 1 6 6 C 1.38137 * 120.05917 * 179.97438 * 5 4 2 7 7 C 1.38733 * 119.94429 * 359.97438 * 6 5 4 8 8 O 1.35902 * 120.05526 * 180.02562 * 7 6 5 9 9 C 1.42901 * 116.99954 * 180.02562 * 8 7 6 10 10 C 1.50696 * 109.47280 * 180.02562 * 9 8 7 11 11 O 1.21281 * 119.99909 * 359.97438 * 10 9 8 12 12 N 1.34781 * 120.00051 * 180.02562 * 10 9 8 13 13 C 1.46496 * 119.99775 * 179.97438 * 12 10 9 14 14 H 1.08996 * 109.47565 * 34.99894 * 13 12 10 15 15 C 1.52997 * 109.46953 * 154.99854 * 13 12 10 16 16 C 1.53006 * 109.47127 * 179.97438 * 15 13 12 17 17 C 1.52999 * 109.46626 * 299.99539 * 16 15 13 18 18 H 1.09002 * 109.46719 * 180.02562 * 17 16 15 19 19 O 1.42900 * 109.47815 * 299.99894 * 17 16 15 20 20 C 1.52997 * 109.46991 * 60.00378 * 17 16 15 21 21 C 1.52996 * 109.47131 * 299.99311 * 20 17 16 22 22 C 1.38731 * 119.88590 * 0.27697 * 7 6 5 23 23 C 1.38144 * 119.94501 * 359.42092 * 22 7 6 24 24 H 0.96697 * 113.99467 * 59.99921 * 1 2 3 25 25 H 1.09001 * 109.46717 * 120.00207 * 2 1 3 26 26 H 1.48500 * 110.00071 * 60.00118 * 3 2 1 27 27 H 1.48501 * 109.99868 * 181.31677 * 3 2 1 28 28 H 1.08009 * 119.97054 * 359.97438 * 5 4 2 29 29 H 1.08005 * 120.02866 * 180.02562 * 6 5 4 30 30 H 1.08994 * 109.47209 * 59.99696 * 9 8 7 31 31 H 1.09005 * 109.46598 * 300.00195 * 9 8 7 32 32 H 0.97001 * 119.99650 * 359.97438 * 12 10 9 33 33 H 1.09001 * 109.47502 * 60.00124 * 15 13 12 34 34 H 1.09001 * 109.47289 * 299.99920 * 15 13 12 35 35 H 1.08993 * 109.46955 * 60.00011 * 16 15 13 36 36 H 1.09000 * 109.47050 * 179.97438 * 16 15 13 37 37 H 0.96699 * 114.00011 * 180.02562 * 19 17 16 38 38 H 1.09001 * 109.47289 * 179.97438 * 20 17 16 39 39 H 1.09000 * 109.47611 * 59.99933 * 20 17 16 40 40 H 1.08996 * 109.47452 * 300.00000 * 21 20 17 41 41 H 1.09000 * 109.47054 * 180.02562 * 21 20 17 42 42 H 1.08002 * 120.02884 * 179.72361 * 22 7 6 43 43 H 1.08002 * 119.97463 * 180.27707 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2305 5 6 1.5967 -2.0342 -1.4482 6 6 2.0554 -2.6875 -2.5756 7 6 2.8523 -2.0141 -3.4900 8 8 3.3045 -2.6544 -4.6002 9 6 4.1206 -1.8991 -5.4977 10 6 4.5241 -2.7674 -6.6614 11 8 4.1500 -3.9197 -6.7165 12 7 5.3015 -2.2636 -7.6404 13 6 5.6941 -3.1079 -8.7714 14 1 4.8799 -3.7901 -9.0155 15 6 6.0014 -2.2262 -9.9834 16 6 6.4122 -3.1079 -11.1645 17 6 7.6582 -3.9131 -10.7906 18 1 7.9511 -4.5409 -11.6321 19 8 8.7254 -3.0184 -10.4704 20 6 7.3509 -4.7948 -9.5785 21 6 6.9402 -3.9132 -8.3975 22 6 3.1911 -0.6874 -3.2666 23 6 2.7246 -0.0368 -2.1408 24 1 -0.3932 0.4417 -0.7650 25 1 1.7923 -0.5139 0.8900 26 1 1.5616 2.4678 1.2085 27 1 3.5347 1.7702 -0.0321 28 1 0.9759 -2.5579 -0.7362 29 1 1.7933 -3.7214 -2.7454 30 1 5.0125 -1.5542 -4.9748 31 1 3.5588 -1.0396 -5.8636 32 1 5.6010 -1.3420 -7.5960 33 1 6.8158 -1.5440 -9.7394 34 1 5.1139 -1.6521 -10.2495 35 1 5.5982 -3.7904 -11.4087 36 1 6.6306 -2.4798 -12.0281 37 1 9.5491 -3.4609 -10.2237 38 1 8.2385 -5.3688 -9.3124 39 1 6.5370 -5.4775 -9.8227 40 1 7.7542 -3.2306 -8.1532 41 1 6.7217 -4.5413 -7.5339 42 1 3.8150 -0.1623 -3.9748 43 1 2.9844 0.9973 -1.9687 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_2989410.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:55:25 Heat of formation + Delta-G solvation = -129.776860 kcal Electronic energy + Delta-G solvation = -24873.082715 eV Core-core repulsion = 21077.898354 eV Total energy + Delta-G solvation = -3795.184362 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.60956 -40.93659 -39.79378 -38.90071 -37.15193 -36.65207 -34.39904 -32.43540 -31.92921 -31.75659 -30.64776 -28.71819 -26.21780 -24.22515 -23.90285 -23.31227 -22.30862 -21.56643 -20.93184 -19.51960 -18.52922 -18.14885 -17.85616 -17.44954 -17.25331 -16.91879 -16.62308 -16.22994 -15.97413 -15.85744 -15.59110 -15.31453 -14.96904 -14.69128 -14.50367 -14.26529 -14.12072 -13.78152 -13.71165 -13.53372 -13.36540 -13.29589 -13.13260 -12.54684 -12.22798 -12.13478 -12.11196 -12.05661 -11.73720 -11.67732 -11.35880 -10.99910 -10.73069 -10.42764 -10.14203 -10.05601 -9.21793 -5.06408 0.28198 0.29173 1.28932 1.43255 1.48838 1.60244 1.95701 2.53405 2.65594 3.20760 3.40716 3.47459 3.61610 3.62153 3.70606 3.73437 3.86220 3.87104 3.88034 3.88294 3.96794 4.12935 4.25725 4.30080 4.39025 4.39949 4.43553 4.50161 4.54901 4.63727 4.79956 4.84061 4.94170 4.95084 5.06066 5.06820 5.14077 5.17850 5.24186 5.25375 5.42278 5.49669 5.67566 6.22761 6.38120 6.58316 6.62513 7.09567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.063 4.063 3 Si 0.687 3.313 4 C -0.157 4.157 5 C -0.051 4.051 6 C -0.146 4.146 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.516 3.484 11 O -0.513 6.513 12 N -0.723 5.723 13 C 0.148 3.852 14 H 0.089 0.911 15 C -0.123 4.123 16 C -0.109 4.109 17 C 0.102 3.898 18 H 0.058 0.942 19 O -0.564 6.564 20 C -0.151 4.151 21 C -0.126 4.126 22 C -0.206 4.206 23 C -0.076 4.076 24 H 0.379 0.621 25 H 0.113 0.887 26 H -0.255 1.255 27 H -0.259 1.259 28 H 0.135 0.865 29 H 0.136 0.864 30 H 0.094 0.906 31 H 0.096 0.904 32 H 0.402 0.598 33 H 0.079 0.921 34 H 0.069 0.931 35 H 0.079 0.921 36 H 0.076 0.924 37 H 0.378 0.622 38 H 0.069 0.931 39 H 0.075 0.925 40 H 0.071 0.929 41 H 0.067 0.933 42 H 0.132 0.868 43 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.329 3.916 -3.903 6.000 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.174 4.174 3 Si 0.589 3.411 4 C -0.158 4.158 5 C -0.069 4.069 6 C -0.164 4.164 7 C 0.089 3.911 8 O -0.200 6.200 9 C -0.039 4.039 10 C 0.301 3.699 11 O -0.387 6.387 12 N -0.377 5.377 13 C 0.044 3.956 14 H 0.107 0.893 15 C -0.161 4.161 16 C -0.147 4.147 17 C 0.043 3.957 18 H 0.076 0.924 19 O -0.370 6.370 20 C -0.189 4.189 21 C -0.164 4.164 22 C -0.225 4.225 23 C -0.094 4.094 24 H 0.226 0.774 25 H 0.130 0.870 26 H -0.180 1.180 27 H -0.184 1.184 28 H 0.153 0.847 29 H 0.154 0.846 30 H 0.112 0.888 31 H 0.113 0.887 32 H 0.236 0.764 33 H 0.097 0.903 34 H 0.088 0.912 35 H 0.098 0.902 36 H 0.095 0.905 37 H 0.225 0.775 38 H 0.088 0.912 39 H 0.094 0.906 40 H 0.090 0.910 41 H 0.085 0.915 42 H 0.149 0.851 43 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 2.116 3.593 -3.155 5.229 hybrid contribution 0.861 -0.433 0.276 1.003 sum 2.978 3.160 -2.879 5.210 Atomic orbital electron populations 1.86503 1.17181 1.81692 1.49262 1.24980 0.85183 1.09872 0.97410 0.94804 0.80819 0.78197 0.87239 1.20253 1.01889 0.95602 0.98057 1.20854 0.96788 0.93423 0.95845 1.20539 1.00450 1.01264 0.94167 1.19081 0.94260 0.91090 0.86713 1.86175 1.64298 1.38651 1.30920 1.22485 0.96383 0.94596 0.90459 1.20032 0.78662 0.88099 0.83157 1.90782 1.53425 1.17574 1.76871 1.45902 1.52504 1.16077 1.23173 1.21038 0.97308 0.92472 0.84767 0.89332 1.21718 1.02073 0.98359 0.93924 1.21497 0.95987 0.99069 0.98155 1.21812 0.87928 0.90542 0.95426 0.92406 1.86497 1.22999 1.36695 1.90829 1.22220 1.02469 0.98348 0.95856 1.21821 0.97566 0.98804 0.98230 1.21175 1.06153 0.94265 1.00911 1.20788 0.96263 0.99036 0.93274 0.77382 0.86980 1.18008 1.18394 0.84748 0.84646 0.88773 0.88662 0.76365 0.90275 0.91215 0.90236 0.90505 0.77503 0.91209 0.90618 0.90990 0.91470 0.85050 0.85323 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.17 12.77 -35.23 -0.45 -0.62 16 2 C -0.06 0.01 2.82 36.01 0.10 0.11 16 3 Si 0.69 -0.80 29.78 -169.99 -5.06 -5.86 16 4 C -0.16 -0.05 5.39 -104.60 -0.56 -0.61 16 5 C -0.05 -0.05 9.60 -39.61 -0.38 -0.43 16 6 C -0.15 -0.27 9.99 -39.44 -0.39 -0.66 16 7 C 0.13 0.24 6.69 -39.22 -0.26 -0.03 16 8 O -0.29 -0.82 9.67 -39.34 -0.38 -1.20 16 9 C 0.04 -0.04 5.22 36.00 0.19 0.15 16 10 C 0.52 0.75 7.87 -10.99 -0.09 0.67 16 11 O -0.51 -3.26 16.16 -14.35 -0.23 -3.49 16 12 N -0.72 0.99 5.08 -53.81 -0.27 0.72 16 13 C 0.15 -0.08 2.45 -67.93 -0.17 -0.24 16 14 H 0.09 0.12 7.58 -51.93 -0.39 -0.27 16 15 C -0.12 0.21 5.25 -26.73 -0.14 0.07 16 16 C -0.11 0.18 5.66 -26.73 -0.15 0.03 16 17 C 0.10 -0.16 3.77 -26.73 -0.10 -0.26 16 18 H 0.06 -0.12 8.14 -51.93 -0.42 -0.55 16 19 O -0.56 0.50 11.97 -35.23 -0.42 0.08 16 20 C -0.15 0.21 5.64 -26.73 -0.15 0.06 16 21 C -0.13 0.03 5.35 -26.73 -0.14 -0.11 16 22 C -0.21 0.07 9.04 -39.43 -0.36 -0.29 16 23 C -0.08 0.04 8.66 -39.60 -0.34 -0.30 16 24 H 0.38 -1.33 8.70 45.56 0.40 -0.93 16 25 H 0.11 0.04 7.96 -51.93 -0.41 -0.38 16 26 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 27 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 28 H 0.13 0.03 8.06 -52.48 -0.42 -0.39 16 29 H 0.14 0.19 8.06 -52.48 -0.42 -0.23 16 30 H 0.09 -0.31 7.65 -51.93 -0.40 -0.71 16 31 H 0.10 -0.34 7.67 -51.93 -0.40 -0.74 16 32 H 0.40 -1.76 8.60 -40.82 -0.35 -2.11 16 33 H 0.08 -0.10 7.68 -51.93 -0.40 -0.50 16 34 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 35 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 36 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 37 H 0.38 -1.54 9.08 45.56 0.41 -1.12 16 38 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 40 H 0.07 -0.02 7.68 -51.93 -0.40 -0.42 16 41 H 0.07 0.12 8.14 -51.93 -0.42 -0.31 16 42 H 0.13 -0.40 6.30 -52.49 -0.33 -0.73 16 43 H 0.13 -0.33 4.87 -52.49 -0.26 -0.59 16 LS Contribution 349.94 15.07 5.27 5.27 Total: 0.00 -9.71 349.94 -10.03 -19.74 By element: Atomic # 1 Polarization: -7.25 SS G_CDS: -5.53 Total: -12.78 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: -2.95 Total: -1.84 kcal Atomic # 7 Polarization: 0.99 SS G_CDS: -0.27 Total: 0.72 kcal Atomic # 8 Polarization: -3.76 SS G_CDS: -1.48 Total: -5.24 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.06 Total: -5.86 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -9.71 -10.03 -19.74 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_2989410.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.040 kcal (2) G-P(sol) polarization free energy of solvation -9.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.750 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.027 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.737 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.777 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds