Wall clock time and date at job start Sat Mar 6 2021 17:55:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42889 * 1 3 3 C 1.35998 * 117.00193 * 2 1 4 4 C 1.39158 * 120.07355 * 180.02562 * 3 2 1 5 5 O 1.35987 * 120.07377 * 359.97438 * 4 3 2 6 6 C 1.42901 * 117.00202 * 179.97438 * 5 4 3 7 7 C 1.50702 * 109.47394 * 180.02562 * 6 5 4 8 8 O 1.21287 * 119.99819 * 359.97438 * 7 6 5 9 9 N 1.34768 * 120.00167 * 180.02562 * 7 6 5 10 10 C 1.46497 * 120.00062 * 180.02562 * 9 7 6 11 11 H 1.08995 * 109.47402 * 34.99661 * 10 9 7 12 12 C 1.53000 * 109.47186 * 154.99832 * 10 9 7 13 13 C 1.52999 * 109.47281 * 59.99858 * 12 10 9 14 14 C 1.53000 * 109.47374 * 60.00060 * 13 12 10 15 15 H 1.08995 * 109.47301 * 60.00272 * 14 13 12 16 16 O 1.42902 * 109.47222 * 180.02562 * 14 13 12 17 17 C 1.53000 * 109.46867 * 300.00193 * 14 13 12 18 18 C 1.52999 * 109.47281 * 59.99750 * 17 14 13 19 19 C 1.38561 * 119.85205 * 179.97438 * 4 3 2 20 20 C 1.38245 * 120.00240 * 359.97438 * 19 4 3 21 21 N 1.48007 * 119.92939 * 179.72620 * 20 19 4 22 22 O 1.21795 * 119.99840 * 0.02562 * 21 20 19 23 23 O 1.21795 * 119.99700 * 180.02562 * 21 20 19 24 24 C 1.38256 * 120.14249 * 0.02562 * 20 19 4 25 25 C 1.50705 * 119.92175 * 179.97438 * 24 20 19 26 26 O 1.42899 * 109.47141 * 75.00207 * 25 24 20 27 27 Si 1.86303 * 109.46691 * 194.99747 * 25 24 20 28 28 C 1.38234 * 120.14940 * 359.97438 * 24 20 19 29 29 H 1.09002 * 109.47852 * 180.02562 * 1 2 3 30 30 H 1.09005 * 109.47518 * 300.00040 * 1 2 3 31 31 H 1.08996 * 109.47731 * 59.99887 * 1 2 3 32 32 H 1.08999 * 109.46775 * 300.00463 * 6 5 4 33 33 H 1.08995 * 109.47129 * 60.00175 * 6 5 4 34 34 H 0.97006 * 120.00347 * 359.97438 * 9 7 6 35 35 H 1.09005 * 109.47295 * 179.97438 * 12 10 9 36 36 H 1.08998 * 109.47082 * 299.99477 * 12 10 9 37 37 H 1.09004 * 109.47517 * 180.02562 * 13 12 10 38 38 H 1.09007 * 109.47052 * 299.99692 * 13 12 10 39 39 H 0.96696 * 114.00023 * 179.97438 * 16 14 13 40 40 H 1.08998 * 109.47082 * 180.02562 * 17 14 13 41 41 H 1.09007 * 109.46826 * 299.99919 * 17 14 13 42 42 H 1.09001 * 109.46837 * 179.97438 * 18 17 14 43 43 H 1.09005 * 109.46623 * 59.99996 * 18 17 14 44 44 H 1.08000 * 120.00417 * 179.97438 * 19 4 3 45 45 H 1.08988 * 109.47132 * 314.99956 * 25 24 20 46 46 H 0.96692 * 114.00269 * 179.97438 * 26 25 24 47 47 H 1.48490 * 110.00443 * 300.00239 * 27 25 24 48 48 H 1.48506 * 109.99633 * 61.32615 * 27 25 24 49 49 H 1.08006 * 120.00369 * 180.02562 * 28 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1795 0.1477 -0.0005 6 6 5.6003 0.3006 -0.0017 7 6 6.2518 -1.0582 -0.0021 8 8 5.5669 -2.0592 -0.0011 9 7 7.5956 -1.1613 -0.0027 10 6 8.2289 -2.4823 -0.0037 11 1 7.6268 -3.1735 -0.5932 12 6 9.6281 -2.3766 -0.6138 13 6 10.4734 -1.4063 0.2138 14 6 10.5811 -1.9213 1.6505 15 1 11.0524 -2.9041 1.6498 16 8 11.3702 -1.0147 2.4235 17 6 9.1820 -2.0270 2.2606 18 6 8.3367 -2.9972 1.4330 19 6 4.0602 2.5233 -0.0011 20 6 3.3029 3.6798 -0.0016 21 7 3.9715 5.0003 0.0040 22 8 5.1876 5.0671 0.0085 23 8 3.3055 6.0200 0.0040 24 6 1.9224 3.6057 -0.0011 25 6 1.1016 4.8697 -0.0011 26 8 1.1342 5.4587 -1.3026 27 14 -0.6593 4.4665 0.4542 28 6 1.2932 2.3748 -0.0005 29 1 -0.3635 -1.0276 0.0005 30 1 -0.3634 0.5138 0.8900 31 1 -0.3634 0.5138 -0.8899 32 1 5.9058 0.8500 -0.8921 33 1 5.9072 0.8508 0.8878 34 1 8.1435 -0.3607 -0.0032 35 1 10.0995 -3.3594 -0.6141 36 1 9.5513 -2.0097 -1.6373 37 1 11.4700 -1.3306 -0.2211 38 1 10.0021 -0.4234 0.2144 39 1 11.4806 -1.2785 3.3473 40 1 9.2588 -2.3934 3.2842 41 1 8.7108 -1.0440 2.2612 42 1 7.3401 -3.0728 1.8680 43 1 8.8080 -3.9801 1.4323 44 1 5.1385 2.5840 -0.0011 45 1 1.5134 5.5702 0.7252 46 1 0.6255 6.2777 -1.3765 47 1 -1.2323 3.5120 -0.5284 48 1 -0.7101 3.8826 1.8187 49 1 0.2145 2.3196 -0.0005 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:55:49 Heat of formation + Delta-G solvation = -146.983929 kcal Electronic energy + Delta-G solvation = -36556.834288 eV Core-core repulsion = 31455.667525 eV Total energy + Delta-G solvation = -5101.166763 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.160 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -43.24313 -42.13984 -41.46149 -40.20546 -39.35715 -39.01414 -37.60523 -37.10675 -37.00027 -34.24168 -32.80734 -32.59550 -32.06721 -30.74223 -29.27518 -28.80000 -27.85803 -25.77721 -24.11556 -23.95374 -23.38732 -23.05718 -22.23351 -20.73441 -20.33578 -19.72739 -19.51744 -18.79914 -18.77059 -18.35535 -18.18492 -18.03526 -17.85051 -17.76461 -17.05331 -16.88787 -16.56244 -16.55221 -16.05753 -15.73525 -15.59687 -15.44205 -15.05725 -14.79294 -14.74740 -14.34698 -14.20475 -14.13311 -14.08875 -13.92079 -13.54625 -13.45105 -13.10349 -13.00270 -12.70473 -12.60515 -12.48099 -12.40705 -12.36537 -12.35556 -12.24476 -11.95473 -11.90882 -11.84767 -11.38102 -11.00664 -10.89998 -10.56938 -10.28200 -10.24156 -9.53580 -5.19281 -1.21286 -0.51122 0.32508 0.42621 1.02320 1.14301 1.38822 1.41079 1.66716 1.69530 1.85739 2.24542 2.82442 3.02833 3.05716 3.22185 3.34754 3.39648 3.51606 3.51787 3.62790 3.65188 3.70357 3.78425 3.84309 3.86385 3.89150 3.89741 3.93625 4.02271 4.15258 4.17575 4.22798 4.23243 4.33979 4.34155 4.43787 4.58398 4.65755 4.66290 4.82594 4.88856 4.90920 4.95222 5.07436 5.15674 5.30016 5.43520 5.47145 5.90516 6.24379 6.54503 6.58547 6.79832 6.99779 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.283 6.283 3 C 0.170 3.830 4 C 0.110 3.890 5 O -0.264 6.264 6 C 0.030 3.970 7 C 0.519 3.481 8 O -0.509 6.509 9 N -0.720 5.720 10 C 0.146 3.854 11 H 0.095 0.905 12 C -0.126 4.126 13 C -0.115 4.115 14 C 0.103 3.897 15 H 0.058 0.942 16 O -0.568 6.568 17 C -0.151 4.151 18 C -0.131 4.131 19 C -0.117 4.117 20 C -0.024 4.024 21 N 0.036 4.964 22 O -0.174 6.174 23 O -0.132 6.132 24 C 0.006 3.994 25 C -0.082 4.082 26 O -0.534 6.534 27 Si 0.688 3.312 28 C -0.186 4.186 29 H 0.116 0.884 30 H 0.061 0.939 31 H 0.063 0.937 32 H 0.100 0.900 33 H 0.100 0.900 34 H 0.402 0.598 35 H 0.085 0.915 36 H 0.080 0.920 37 H 0.077 0.923 38 H 0.068 0.932 39 H 0.380 0.620 40 H 0.067 0.933 41 H 0.070 0.930 42 H 0.073 0.927 43 H 0.077 0.923 44 H 0.168 0.832 45 H 0.102 0.898 46 H 0.390 0.610 47 H -0.248 1.248 48 H -0.250 1.250 49 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.698 -0.339 1.353 2.198 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.194 6.194 3 C 0.122 3.878 4 C 0.063 3.937 5 O -0.176 6.176 6 C -0.049 4.049 7 C 0.303 3.697 8 O -0.382 6.382 9 N -0.375 5.375 10 C 0.042 3.958 11 H 0.113 0.887 12 C -0.164 4.164 13 C -0.153 4.153 14 C 0.044 3.956 15 H 0.075 0.925 16 O -0.374 6.374 17 C -0.189 4.189 18 C -0.169 4.169 19 C -0.137 4.137 20 C -0.108 4.108 21 N 0.555 4.445 22 O -0.384 6.384 23 O -0.352 6.352 24 C 0.004 3.996 25 C -0.193 4.193 26 O -0.341 6.341 27 Si 0.588 3.412 28 C -0.205 4.205 29 H 0.135 0.865 30 H 0.079 0.921 31 H 0.082 0.918 32 H 0.118 0.882 33 H 0.117 0.883 34 H 0.238 0.762 35 H 0.104 0.896 36 H 0.098 0.902 37 H 0.096 0.904 38 H 0.086 0.914 39 H 0.228 0.772 40 H 0.085 0.915 41 H 0.088 0.912 42 H 0.092 0.908 43 H 0.096 0.904 44 H 0.186 0.814 45 H 0.119 0.881 46 H 0.238 0.762 47 H -0.173 1.173 48 H -0.174 1.174 49 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -2.641 -3.004 0.880 4.095 hybrid contribution 0.907 0.643 0.594 1.260 sum -1.735 -2.361 1.474 3.279 Atomic orbital electron populations 1.23377 0.76994 1.05720 1.01849 1.86332 1.22286 1.24230 1.86593 1.18405 0.89114 0.85733 0.94577 1.17808 0.88265 0.85424 1.02228 1.86331 1.16886 1.25939 1.88422 1.22686 0.80162 0.97412 1.04624 1.19820 0.82696 0.90075 0.77086 1.90803 1.62623 1.37760 1.47023 1.45951 1.05590 1.10000 1.75949 1.21033 0.93715 0.84103 0.96940 0.88660 1.21830 0.93648 1.01280 0.99608 1.21490 1.01209 0.99201 0.93389 1.21834 0.89892 0.92464 0.91395 0.92452 1.86513 1.73364 1.51495 1.26065 1.22254 0.96258 1.00769 0.99614 1.21901 1.01049 0.99085 0.94888 1.20798 1.02220 0.88884 1.01775 1.20371 0.91808 0.83297 1.15327 1.43250 1.00944 1.02445 0.97814 1.94548 0.95676 1.93684 1.54520 1.94492 1.64673 1.24155 1.51917 1.18946 0.90702 0.95061 0.94880 1.24877 1.09143 0.93997 0.91264 1.86434 1.76680 1.44068 1.26919 0.94606 0.78997 0.87576 0.79998 1.20934 1.00729 0.90027 1.08803 0.86537 0.92075 0.91807 0.88200 0.88264 0.76156 0.89600 0.90170 0.90425 0.91359 0.77247 0.91456 0.91161 0.90797 0.90421 0.81437 0.88085 0.76152 1.17252 1.17407 0.82580 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.70 10.28 -34.23 -0.35 -1.05 16 3 C 0.17 0.39 6.70 -39.12 -0.26 0.13 16 4 C 0.11 0.24 6.70 -39.12 -0.26 -0.02 16 5 O -0.26 -0.75 9.45 -47.32 -0.45 -1.20 16 6 C 0.03 -0.02 5.22 36.01 0.19 0.16 16 7 C 0.52 0.59 7.87 -10.99 -0.09 0.50 16 8 O -0.51 -2.96 16.16 -14.36 -0.23 -3.19 16 9 N -0.72 1.22 4.23 -53.81 -0.23 0.99 16 10 C 0.15 -0.21 2.78 -67.93 -0.19 -0.40 16 11 H 0.10 0.02 7.58 -51.93 -0.39 -0.38 16 12 C -0.13 0.38 5.61 -26.73 -0.15 0.23 16 13 C -0.12 0.25 5.40 -26.73 -0.14 0.11 16 14 C 0.10 -0.17 3.47 -26.73 -0.09 -0.26 16 15 H 0.06 -0.12 8.14 -51.93 -0.42 -0.54 16 16 O -0.57 0.11 13.32 -35.23 -0.47 -0.36 16 17 C -0.15 0.27 5.39 -26.73 -0.14 0.13 16 18 C -0.13 0.16 5.60 -26.73 -0.15 0.01 16 19 C -0.12 -0.16 8.54 -39.46 -0.34 -0.49 16 20 C -0.02 -0.07 6.85 -79.94 -0.55 -0.62 16 21 N 0.04 0.17 4.45 33.96 0.15 0.32 16 22 O -0.17 -0.90 18.44 -29.46 -0.54 -1.44 16 23 O -0.13 -0.61 14.63 -35.94 -0.53 -1.14 16 24 C 0.01 0.01 5.29 -104.61 -0.55 -0.54 16 25 C -0.08 -0.01 1.73 36.01 0.06 0.05 16 26 O -0.53 -0.24 11.78 -55.40 -0.65 -0.89 16 27 Si 0.69 -1.48 30.19 -169.99 -5.13 -6.61 16 28 C -0.19 -0.26 7.65 -39.46 -0.30 -0.56 16 29 H 0.12 -0.36 8.14 -51.93 -0.42 -0.78 16 30 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 31 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 32 H 0.10 -0.33 7.66 -51.93 -0.40 -0.73 16 33 H 0.10 -0.33 7.66 -51.93 -0.40 -0.73 16 34 H 0.40 -1.57 6.87 -40.82 -0.28 -1.85 16 35 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 36 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 37 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.07 -0.17 6.51 -51.93 -0.34 -0.51 16 39 H 0.38 -1.39 9.08 45.56 0.41 -0.98 16 40 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 41 H 0.07 -0.08 7.60 -51.93 -0.39 -0.48 16 42 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 43 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 44 H 0.17 -0.17 5.85 -52.49 -0.31 -0.48 16 45 H 0.10 -0.02 6.06 -51.94 -0.31 -0.33 16 46 H 0.39 -1.74 8.74 45.56 0.40 -1.34 16 47 H -0.25 0.09 6.74 56.52 0.38 0.48 16 48 H -0.25 0.02 7.11 56.52 0.40 0.42 16 49 H 0.16 -0.02 3.13 -52.48 -0.16 -0.19 16 LS Contribution 398.61 15.07 6.01 6.01 Total: 0.00 -12.16 398.61 -9.97 -22.14 By element: Atomic # 1 Polarization: -7.40 SS G_CDS: -5.57 Total: -12.97 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -1.98 Total: -0.60 kcal Atomic # 7 Polarization: 1.38 SS G_CDS: -0.08 Total: 1.31 kcal Atomic # 8 Polarization: -6.05 SS G_CDS: -3.22 Total: -9.27 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.13 Total: -6.61 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -12.16 -9.97 -22.14 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.848 kcal (2) G-P(sol) polarization free energy of solvation -12.162 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.010 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.974 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.136 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.984 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds