Wall clock time and date at job start Sat Mar 6 2021 17:55:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42889 * 1 3 3 C 1.35998 * 117.00193 * 2 1 4 4 C 1.39158 * 120.07355 * 180.02562 * 3 2 1 5 5 O 1.35987 * 120.07377 * 359.97438 * 4 3 2 6 6 C 1.42901 * 117.00202 * 179.97438 * 5 4 3 7 7 C 1.50702 * 109.47394 * 180.02562 * 6 5 4 8 8 O 1.21287 * 119.99819 * 359.97438 * 7 6 5 9 9 N 1.34768 * 120.00167 * 180.02562 * 7 6 5 10 10 C 1.46497 * 120.00062 * 180.02562 * 9 7 6 11 11 H 1.08995 * 109.47402 * 34.99661 * 10 9 7 12 12 C 1.53000 * 109.47186 * 154.99832 * 10 9 7 13 13 C 1.52999 * 109.47281 * 59.99858 * 12 10 9 14 14 C 1.53000 * 109.47374 * 60.00060 * 13 12 10 15 15 H 1.08995 * 109.47301 * 60.00272 * 14 13 12 16 16 O 1.42902 * 109.47222 * 180.02562 * 14 13 12 17 17 C 1.53000 * 109.46867 * 300.00193 * 14 13 12 18 18 C 1.52999 * 109.47281 * 59.99750 * 17 14 13 19 19 C 1.38561 * 119.85205 * 179.97438 * 4 3 2 20 20 C 1.38245 * 120.00240 * 359.97438 * 19 4 3 21 21 N 1.48007 * 119.92939 * 179.72620 * 20 19 4 22 22 O 1.21795 * 119.99840 * 0.02562 * 21 20 19 23 23 O 1.21795 * 119.99700 * 180.02562 * 21 20 19 24 24 C 1.38256 * 120.14249 * 0.02562 * 20 19 4 25 25 C 1.50705 * 119.92175 * 179.97438 * 24 20 19 26 26 O 1.42899 * 109.47141 * 75.00207 * 25 24 20 27 27 Si 1.86303 * 109.46691 * 194.99747 * 25 24 20 28 28 C 1.38234 * 120.14940 * 359.97438 * 24 20 19 29 29 H 1.09002 * 109.47852 * 180.02562 * 1 2 3 30 30 H 1.09005 * 109.47518 * 300.00040 * 1 2 3 31 31 H 1.08996 * 109.47731 * 59.99887 * 1 2 3 32 32 H 1.08999 * 109.46775 * 300.00463 * 6 5 4 33 33 H 1.08995 * 109.47129 * 60.00175 * 6 5 4 34 34 H 0.97006 * 120.00347 * 359.97438 * 9 7 6 35 35 H 1.09005 * 109.47295 * 179.97438 * 12 10 9 36 36 H 1.08998 * 109.47082 * 299.99477 * 12 10 9 37 37 H 1.09004 * 109.47517 * 180.02562 * 13 12 10 38 38 H 1.09007 * 109.47052 * 299.99692 * 13 12 10 39 39 H 0.96696 * 114.00023 * 179.97438 * 16 14 13 40 40 H 1.08998 * 109.47082 * 180.02562 * 17 14 13 41 41 H 1.09007 * 109.46826 * 299.99919 * 17 14 13 42 42 H 1.09001 * 109.46837 * 179.97438 * 18 17 14 43 43 H 1.09005 * 109.46623 * 59.99996 * 18 17 14 44 44 H 1.08000 * 120.00417 * 179.97438 * 19 4 3 45 45 H 1.08988 * 109.47132 * 314.99956 * 25 24 20 46 46 H 0.96692 * 114.00269 * 179.97438 * 26 25 24 47 47 H 1.48490 * 110.00443 * 300.00239 * 27 25 24 48 48 H 1.48506 * 109.99633 * 61.32615 * 27 25 24 49 49 H 1.08006 * 120.00369 * 180.02562 * 28 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1795 0.1477 -0.0005 6 6 5.6003 0.3006 -0.0017 7 6 6.2518 -1.0582 -0.0021 8 8 5.5669 -2.0592 -0.0011 9 7 7.5956 -1.1613 -0.0027 10 6 8.2289 -2.4823 -0.0037 11 1 7.6268 -3.1735 -0.5932 12 6 9.6281 -2.3766 -0.6138 13 6 10.4734 -1.4063 0.2138 14 6 10.5811 -1.9213 1.6505 15 1 11.0524 -2.9041 1.6498 16 8 11.3702 -1.0147 2.4235 17 6 9.1820 -2.0270 2.2606 18 6 8.3367 -2.9972 1.4330 19 6 4.0602 2.5233 -0.0011 20 6 3.3029 3.6798 -0.0016 21 7 3.9715 5.0003 0.0040 22 8 5.1876 5.0671 0.0085 23 8 3.3055 6.0200 0.0040 24 6 1.9224 3.6057 -0.0011 25 6 1.1016 4.8697 -0.0011 26 8 1.1342 5.4587 -1.3026 27 14 -0.6593 4.4665 0.4542 28 6 1.2932 2.3748 -0.0005 29 1 -0.3635 -1.0276 0.0005 30 1 -0.3634 0.5138 0.8900 31 1 -0.3634 0.5138 -0.8899 32 1 5.9058 0.8500 -0.8921 33 1 5.9072 0.8508 0.8878 34 1 8.1435 -0.3607 -0.0032 35 1 10.0995 -3.3594 -0.6141 36 1 9.5513 -2.0097 -1.6373 37 1 11.4700 -1.3306 -0.2211 38 1 10.0021 -0.4234 0.2144 39 1 11.4806 -1.2785 3.3473 40 1 9.2588 -2.3934 3.2842 41 1 8.7108 -1.0440 2.2612 42 1 7.3401 -3.0728 1.8680 43 1 8.8080 -3.9801 1.4323 44 1 5.1385 2.5840 -0.0011 45 1 1.5134 5.5702 0.7252 46 1 0.6255 6.2777 -1.3765 47 1 -1.2323 3.5120 -0.5284 48 1 -0.7101 3.8826 1.8187 49 1 0.2145 2.3196 -0.0005 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:55:48 Heat of formation + Delta-G solvation = -150.695907 kcal Electronic energy + Delta-G solvation = -36556.995251 eV Core-core repulsion = 31455.667525 eV Total energy + Delta-G solvation = -5101.327726 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.160 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -43.48185 -42.25843 -41.47958 -40.21676 -39.41028 -39.07556 -37.82446 -37.16852 -36.99201 -34.25275 -32.88425 -32.69522 -31.93183 -30.70813 -29.24642 -28.73374 -27.98513 -25.85907 -24.19029 -23.81518 -23.36672 -23.12260 -22.23410 -20.86300 -20.29260 -19.96698 -19.60296 -18.91173 -18.86652 -18.30555 -18.24977 -18.08834 -17.89444 -17.82569 -17.06148 -16.86433 -16.58313 -16.50052 -16.05411 -15.74387 -15.57164 -15.41132 -15.04855 -14.77661 -14.75889 -14.33865 -14.17151 -14.10449 -14.00278 -13.93235 -13.57784 -13.31678 -13.03128 -12.87393 -12.73929 -12.70246 -12.55496 -12.46288 -12.41901 -12.27730 -12.23779 -12.21032 -11.93081 -11.81568 -11.24636 -11.13917 -10.79954 -10.65410 -10.24905 -10.23930 -9.64019 -5.01372 -1.42245 -0.59507 0.08893 0.20890 1.13937 1.14444 1.32836 1.56621 1.68477 1.75176 1.79651 2.26046 2.79886 3.01562 3.16675 3.21594 3.30596 3.41135 3.61847 3.65725 3.71269 3.74579 3.77033 3.85591 3.89547 3.97826 3.99243 4.01142 4.05980 4.08656 4.15782 4.20797 4.32058 4.39538 4.45210 4.48879 4.55613 4.56622 4.58511 4.82903 4.92958 5.00136 5.06028 5.09988 5.20781 5.23463 5.26683 5.35604 5.44152 5.86779 6.31039 6.48021 6.83506 6.83613 7.00165 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.004 3.996 2 O -0.304 6.304 3 C 0.163 3.837 4 C 0.103 3.897 5 O -0.289 6.289 6 C 0.024 3.976 7 C 0.518 3.482 8 O -0.564 6.564 9 N -0.703 5.703 10 C 0.144 3.856 11 H 0.077 0.923 12 C -0.115 4.115 13 C -0.115 4.115 14 C 0.103 3.897 15 H 0.063 0.937 16 O -0.588 6.588 17 C -0.144 4.144 18 C -0.127 4.127 19 C -0.108 4.108 20 C -0.043 4.043 21 N 0.037 4.963 22 O -0.195 6.195 23 O -0.137 6.137 24 C -0.004 4.004 25 C -0.101 4.101 26 O -0.553 6.553 27 Si 0.779 3.221 28 C -0.186 4.186 29 H 0.131 0.869 30 H 0.073 0.927 31 H 0.073 0.927 32 H 0.128 0.872 33 H 0.127 0.873 34 H 0.416 0.584 35 H 0.094 0.906 36 H 0.087 0.913 37 H 0.075 0.925 38 H 0.071 0.929 39 H 0.393 0.607 40 H 0.070 0.930 41 H 0.064 0.936 42 H 0.050 0.950 43 H 0.087 0.913 44 H 0.189 0.811 45 H 0.101 0.899 46 H 0.408 0.592 47 H -0.268 1.268 48 H -0.277 1.277 49 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.686 0.212 1.287 2.131 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.216 6.216 3 C 0.115 3.885 4 C 0.056 3.944 5 O -0.201 6.201 6 C -0.054 4.054 7 C 0.303 3.697 8 O -0.442 6.442 9 N -0.359 5.359 10 C 0.040 3.960 11 H 0.096 0.904 12 C -0.153 4.153 13 C -0.153 4.153 14 C 0.044 3.956 15 H 0.081 0.919 16 O -0.396 6.396 17 C -0.182 4.182 18 C -0.166 4.166 19 C -0.127 4.127 20 C -0.127 4.127 21 N 0.553 4.447 22 O -0.401 6.401 23 O -0.358 6.358 24 C -0.006 4.006 25 C -0.209 4.209 26 O -0.363 6.363 27 Si 0.681 3.319 28 C -0.205 4.205 29 H 0.149 0.851 30 H 0.091 0.909 31 H 0.091 0.909 32 H 0.145 0.855 33 H 0.145 0.855 34 H 0.254 0.746 35 H 0.113 0.887 36 H 0.105 0.895 37 H 0.094 0.906 38 H 0.089 0.911 39 H 0.242 0.758 40 H 0.089 0.911 41 H 0.083 0.917 42 H 0.068 0.932 43 H 0.105 0.895 44 H 0.206 0.794 45 H 0.119 0.881 46 H 0.261 0.739 47 H -0.195 1.195 48 H -0.203 1.203 49 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges -2.550 -2.396 0.812 3.592 hybrid contribution 0.906 0.419 0.630 1.180 sum -1.644 -1.977 1.442 2.948 Atomic orbital electron populations 1.23676 0.75264 1.07146 1.02890 1.86311 1.24245 1.24563 1.86487 1.18656 0.89533 0.86032 0.94283 1.17880 0.88386 0.85468 1.02701 1.86297 1.18607 1.26567 1.88659 1.22961 0.78603 0.96595 1.07223 1.20215 0.83175 0.90207 0.76057 1.90777 1.63880 1.39599 1.49899 1.45871 1.04926 1.10645 1.74409 1.21046 0.94363 0.83833 0.96742 0.90448 1.21765 0.92201 1.01741 0.99607 1.21507 1.01192 0.99475 0.93141 1.21876 0.89583 0.92593 0.91506 0.91884 1.86478 1.73565 1.52234 1.27303 1.22183 0.96125 1.00194 0.99695 1.21846 0.99917 0.99918 0.94879 1.20959 1.03173 0.88036 1.00557 1.20539 0.92400 0.82749 1.17022 1.43440 1.00857 1.02978 0.97463 1.94528 0.96146 1.93946 1.55511 1.94472 1.64588 1.24843 1.51904 1.19332 0.90836 0.96212 0.94197 1.25245 1.11115 0.93344 0.91212 1.86383 1.77551 1.45422 1.26991 0.93514 0.75629 0.85867 0.76910 1.21051 1.01329 0.89489 1.08658 0.85057 0.90870 0.90882 0.85463 0.85547 0.74586 0.88718 0.89462 0.90624 0.91052 0.75771 0.91121 0.91685 0.93163 0.89493 0.79415 0.88144 0.73938 1.19451 1.20316 0.81312 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.30 -1.75 10.28 -79.67 -0.82 -2.57 16 3 C 0.16 0.87 6.70 22.57 0.15 1.02 16 4 C 0.10 0.51 6.70 22.57 0.15 0.66 16 5 O -0.29 -1.90 9.45 -66.99 -0.63 -2.53 16 6 C 0.02 -0.04 5.22 71.24 0.37 0.33 16 7 C 0.52 1.64 7.87 87.66 0.69 2.33 16 8 O -0.56 -7.78 16.16 15.98 0.26 -7.52 16 9 N -0.70 2.20 4.23 -442.55 -1.87 0.33 16 10 C 0.14 -0.33 2.78 44.99 0.13 -0.20 16 11 H 0.08 0.14 7.58 -2.39 -0.02 0.13 16 12 C -0.12 0.75 5.61 30.59 0.17 0.92 16 13 C -0.12 0.59 5.40 30.59 0.17 0.76 16 14 C 0.10 -0.39 3.47 30.59 0.11 -0.29 16 15 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 16 O -0.59 0.53 13.32 -148.98 -1.98 -1.45 16 17 C -0.14 0.52 5.39 30.59 0.16 0.68 16 18 C -0.13 0.23 5.60 30.59 0.17 0.40 16 19 C -0.11 -0.30 8.54 22.35 0.19 -0.11 16 20 C -0.04 -0.28 6.85 36.38 0.25 -0.03 16 21 N 0.04 0.36 4.45 -46.46 -0.21 0.15 16 22 O -0.20 -2.13 18.44 18.89 0.35 -1.78 16 23 O -0.14 -1.35 14.63 25.09 0.37 -0.98 16 24 C 0.00 -0.02 5.29 -19.86 -0.11 -0.12 16 25 C -0.10 -0.02 1.73 71.24 0.12 0.10 16 26 O -0.55 -0.40 11.78 -129.69 -1.53 -1.93 16 27 Si 0.78 -3.94 30.19 68.60 2.07 -1.87 16 28 C -0.19 -0.57 7.65 22.35 0.17 -0.40 16 29 H 0.13 -0.82 8.14 -2.39 -0.02 -0.84 16 30 H 0.07 -0.39 7.66 -2.38 -0.02 -0.41 16 31 H 0.07 -0.34 7.66 -2.39 -0.02 -0.36 16 32 H 0.13 -0.95 7.66 -2.39 -0.02 -0.97 16 33 H 0.13 -0.95 7.66 -2.39 -0.02 -0.96 16 34 H 0.42 -3.50 6.87 -92.70 -0.64 -4.14 16 35 H 0.09 -0.74 8.14 -2.38 -0.02 -0.76 16 36 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 37 H 0.08 -0.31 8.14 -2.38 -0.02 -0.33 16 38 H 0.07 -0.42 6.51 -2.38 -0.02 -0.43 16 39 H 0.39 -3.03 9.08 -74.06 -0.67 -3.70 16 40 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 41 H 0.06 -0.16 7.60 -2.38 -0.02 -0.18 16 42 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 43 H 0.09 -0.33 8.14 -2.38 -0.02 -0.35 16 44 H 0.19 -0.49 5.85 -2.91 -0.02 -0.51 16 45 H 0.10 -0.01 6.06 -2.39 -0.01 -0.03 16 46 H 0.41 -3.84 8.74 -74.06 -0.65 -4.49 16 47 H -0.27 0.46 6.74 99.48 0.67 1.13 16 48 H -0.28 0.17 7.11 99.48 0.71 0.87 16 49 H 0.17 -0.09 3.13 -2.91 -0.01 -0.10 16 Total: 0.00 -29.66 398.61 -0.89 -30.55 By element: Atomic # 1 Polarization: -16.66 SS G_CDS: -0.90 Total: -17.56 kcal Atomic # 6 Polarization: 3.15 SS G_CDS: 4.01 Total: 7.16 kcal Atomic # 7 Polarization: 2.56 SS G_CDS: -2.08 Total: 0.48 kcal Atomic # 8 Polarization: -14.77 SS G_CDS: -3.99 Total: -18.76 kcal Atomic # 14 Polarization: -3.94 SS G_CDS: 2.07 Total: -1.87 kcal Total: -29.66 -0.89 -30.55 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.145 kcal (2) G-P(sol) polarization free energy of solvation -29.662 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -149.807 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.889 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.551 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.696 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds