Wall clock time and date at job start Sat Mar 6 2021 17:55:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86302 * 109.47170 * 2 1 4 4 C 1.50703 * 109.46997 * 240.00207 * 2 1 3 5 5 C 1.38245 * 119.94606 * 120.01664 * 4 2 1 6 6 C 1.38160 * 120.05995 * 179.72533 * 5 4 2 7 7 C 1.38713 * 119.93964 * 0.53026 * 6 5 4 8 8 O 1.35902 * 120.05597 * 179.74820 * 7 6 5 9 9 C 1.42901 * 116.99954 * 359.72269 * 8 7 6 10 10 C 1.50696 * 109.47280 * 179.97438 * 9 8 7 11 11 O 1.21281 * 119.99909 * 0.02562 * 10 9 8 12 12 N 1.34781 * 120.00051 * 179.97438 * 10 9 8 13 13 C 1.46496 * 119.99775 * 180.02562 * 12 10 9 14 14 H 1.08996 * 109.47565 * 325.00106 * 13 12 10 15 15 C 1.53002 * 109.47037 * 85.00675 * 13 12 10 16 16 C 1.53006 * 109.46977 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47127 * 299.99541 * 16 15 13 18 18 H 1.09002 * 109.47153 * 180.02562 * 17 16 15 19 19 O 1.42898 * 109.47319 * 300.00438 * 17 16 15 20 20 C 1.53002 * 109.46817 * 60.00361 * 17 16 15 21 21 C 1.52996 * 109.46972 * 299.99733 * 20 17 16 22 22 C 1.38752 * 119.89132 * 359.47329 * 7 6 5 23 23 N 1.47998 * 120.03099 * 180.27046 * 22 7 6 24 24 O 1.21801 * 120.00029 * 179.97438 * 23 22 7 25 25 O 1.21803 * 119.99846 * 0.02562 * 23 22 7 26 26 C 1.38126 * 119.94049 * 0.25459 * 22 7 6 27 27 H 0.96695 * 114.00706 * 59.99731 * 1 2 3 28 28 H 1.08995 * 109.47411 * 120.00661 * 2 1 3 29 29 H 1.48501 * 109.99723 * 60.00452 * 3 2 1 30 30 H 1.48494 * 110.00204 * 181.32163 * 3 2 1 31 31 H 1.08002 * 119.96821 * 359.97438 * 5 4 2 32 32 H 1.08000 * 120.02984 * 180.26120 * 6 5 4 33 33 H 1.09001 * 109.46845 * 60.00257 * 9 8 7 34 34 H 1.09000 * 109.47635 * 300.00440 * 9 8 7 35 35 H 0.96996 * 120.00159 * 0.02562 * 12 10 9 36 36 H 1.09000 * 109.46986 * 299.99564 * 15 13 12 37 37 H 1.08993 * 109.47662 * 59.99787 * 15 13 12 38 38 H 1.08998 * 109.46505 * 179.97438 * 16 15 13 39 39 H 1.08996 * 109.46884 * 60.00293 * 16 15 13 40 40 H 0.96708 * 113.99549 * 300.00230 * 19 17 16 41 41 H 1.08996 * 109.47407 * 60.00219 * 20 17 16 42 42 H 1.09000 * 109.46986 * 179.97438 * 20 17 16 43 43 H 1.09001 * 109.46993 * 180.02562 * 21 20 17 44 44 H 1.09004 * 109.47298 * 300.00176 * 21 20 17 45 45 H 1.08005 * 119.96997 * 180.02562 * 26 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7263 -0.0375 -2.1396 6 6 3.1928 -0.6881 -3.2656 7 6 2.8537 -2.0145 -3.4892 8 8 3.3070 -2.6552 -4.5986 9 6 4.1238 -1.9001 -5.4957 10 6 4.5296 -2.7692 -6.6580 11 8 4.1558 -3.9216 -6.7130 12 7 5.3071 -2.2654 -7.6369 13 6 5.7011 -3.1102 -8.7671 14 1 5.8501 -4.1331 -8.4216 15 6 4.6007 -3.0859 -9.8299 16 6 5.0125 -3.9676 -11.0106 17 6 6.3152 -3.4376 -11.6131 18 1 6.6083 -4.0655 -12.4545 19 8 6.1196 -2.0963 -12.0656 20 6 7.4155 -3.4619 -10.5503 21 6 7.0037 -2.5801 -9.3697 22 6 2.0556 -2.6876 -2.5753 23 7 1.6969 -4.1046 -2.8078 24 8 0.9966 -4.6951 -2.0049 25 8 2.1027 -4.6804 -3.8014 26 6 1.5965 -2.0343 -1.4483 27 1 -0.3934 0.4417 -0.7649 28 1 1.7924 -0.5139 0.8899 29 1 1.5615 2.4678 1.2086 30 1 3.5345 1.7703 -0.0322 31 1 2.9863 0.9965 -1.9674 32 1 3.8173 -0.1633 -3.9734 33 1 5.0153 -1.5548 -4.9721 34 1 3.5623 -1.0409 -5.8626 35 1 5.6058 -1.3437 -7.5931 36 1 3.6726 -3.4631 -9.4006 37 1 4.4518 -2.0630 -10.1755 38 1 4.2284 -3.9506 -11.7675 39 1 5.1616 -4.9907 -10.6654 40 1 5.4345 -2.0055 -12.7421 41 1 7.5648 -4.4849 -10.2051 42 1 8.3437 -3.0846 -10.9796 43 1 7.7879 -2.5971 -8.6127 44 1 6.8545 -1.5570 -9.7149 45 1 0.9755 -2.5579 -0.7364 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_4549638.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:55:53 Heat of formation + Delta-G solvation = -122.046666 kcal Electronic energy + Delta-G solvation = -31399.072468 eV Core-core repulsion = 26773.206877 eV Total energy + Delta-G solvation = -4625.865591 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.144 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -43.01899 -41.78690 -41.08653 -40.01204 -39.25466 -37.55316 -37.12828 -36.68376 -34.43142 -33.50526 -32.39253 -31.93026 -30.87319 -28.92936 -27.59397 -26.69607 -24.34526 -23.90981 -23.30048 -22.76802 -21.64323 -20.98045 -20.46018 -19.44558 -19.23715 -18.54925 -18.34021 -18.25486 -17.88856 -17.62873 -17.30976 -17.18634 -16.56526 -16.48907 -16.25283 -15.91996 -15.73931 -15.49181 -15.16978 -14.92433 -14.54857 -14.17582 -14.09697 -14.07910 -13.92793 -13.52615 -13.31783 -13.29834 -13.13606 -12.56783 -12.55124 -12.41491 -12.19742 -12.13025 -12.12062 -11.84825 -11.73287 -11.68785 -11.36545 -11.03483 -10.93694 -10.77263 -10.75308 -10.16525 -9.90439 -5.30919 -1.13262 -0.38259 0.38069 0.53450 1.00515 1.09357 1.35704 1.43172 1.74956 1.93386 2.20958 2.98315 3.02352 3.19262 3.21191 3.24987 3.38552 3.51949 3.57064 3.58929 3.64777 3.67175 3.71353 3.87650 3.96419 4.12290 4.14360 4.15496 4.29644 4.30221 4.38800 4.39710 4.42883 4.53969 4.67232 4.79991 4.83916 4.92308 4.94857 5.05542 5.06659 5.17127 5.23861 5.37448 5.46304 5.70859 6.28989 6.32467 6.62072 6.93931 7.05527 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.066 4.066 3 Si 0.693 3.307 4 C -0.158 4.158 5 C -0.025 4.025 6 C -0.209 4.209 7 C 0.200 3.800 8 O -0.253 6.253 9 C 0.030 3.970 10 C 0.514 3.486 11 O -0.496 6.496 12 N -0.723 5.723 13 C 0.148 3.852 14 H 0.090 0.910 15 C -0.126 4.126 16 C -0.151 4.151 17 C 0.102 3.898 18 H 0.058 0.942 19 O -0.565 6.565 20 C -0.109 4.109 21 C -0.122 4.122 22 C -0.076 4.076 23 N 0.029 4.971 24 O -0.177 6.177 25 O -0.118 6.118 26 C 0.009 3.991 27 H 0.381 0.619 28 H 0.121 0.879 29 H -0.248 1.248 30 H -0.254 1.254 31 H 0.149 0.851 32 H 0.157 0.843 33 H 0.101 0.899 34 H 0.102 0.898 35 H 0.401 0.599 36 H 0.068 0.932 37 H 0.071 0.929 38 H 0.070 0.930 39 H 0.076 0.924 40 H 0.378 0.622 41 H 0.079 0.921 42 H 0.076 0.924 43 H 0.069 0.931 44 H 0.078 0.922 45 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.375 9.632 -4.022 10.970 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.176 4.176 3 Si 0.593 3.407 4 C -0.159 4.159 5 C -0.043 4.043 6 C -0.229 4.229 7 C 0.150 3.850 8 O -0.163 6.163 9 C -0.048 4.048 10 C 0.297 3.703 11 O -0.369 6.369 12 N -0.377 5.377 13 C 0.045 3.955 14 H 0.108 0.892 15 C -0.164 4.164 16 C -0.189 4.189 17 C 0.043 3.957 18 H 0.076 0.924 19 O -0.371 6.371 20 C -0.147 4.147 21 C -0.160 4.160 22 C -0.160 4.160 23 N 0.548 4.452 24 O -0.386 6.386 25 O -0.342 6.342 26 C -0.010 4.010 27 H 0.229 0.771 28 H 0.138 0.862 29 H -0.173 1.173 30 H -0.179 1.179 31 H 0.166 0.834 32 H 0.174 0.826 33 H 0.119 0.881 34 H 0.120 0.880 35 H 0.235 0.765 36 H 0.086 0.914 37 H 0.090 0.910 38 H 0.088 0.912 39 H 0.094 0.906 40 H 0.225 0.775 41 H 0.098 0.902 42 H 0.095 0.905 43 H 0.087 0.913 44 H 0.097 0.903 45 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 4.249 9.624 -2.536 10.822 hybrid contribution -0.227 -0.456 -0.311 0.597 sum 4.023 9.168 -2.848 10.409 Atomic orbital electron populations 1.86559 1.16585 1.81611 1.49341 1.25097 0.85689 1.10253 0.96565 0.94896 0.80698 0.76993 0.88068 1.20316 1.02275 0.93992 0.99365 1.21265 0.91875 0.99799 0.91327 1.21275 1.07014 0.92734 1.01836 1.18700 0.89876 0.90799 0.85615 1.86505 1.62792 1.37526 1.29428 1.22748 0.96288 0.94971 0.90813 1.19812 0.79418 0.88152 0.82928 1.90861 1.52098 1.17100 1.76793 1.45875 1.52829 1.16083 1.22903 1.21053 0.94061 0.95491 0.84926 0.89213 1.21822 0.98574 1.00960 0.95055 1.22223 0.97989 1.00390 0.98317 1.21814 0.94533 0.83540 0.95820 0.92397 1.86494 1.61702 1.27655 1.61204 1.21497 0.98051 1.00671 0.94502 1.21713 0.95809 1.00994 0.97518 1.20588 1.10598 0.84047 1.00780 1.43339 0.99181 1.02289 1.00341 1.94557 1.35269 1.66693 1.42044 1.94700 1.54666 1.67573 1.17256 1.20837 0.93495 0.93554 0.93077 0.77125 0.86167 1.17285 1.17922 0.83418 0.82587 0.88113 0.87998 0.76464 0.91354 0.91023 0.91177 0.90553 0.77497 0.90204 0.90528 0.91273 0.90300 0.81805 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.87 12.77 -35.23 -0.45 0.42 16 2 C -0.07 0.17 2.82 36.01 0.10 0.27 16 3 Si 0.69 -2.63 29.78 -169.99 -5.06 -7.69 16 4 C -0.16 0.33 5.39 -104.60 -0.56 -0.23 16 5 C -0.02 0.10 8.66 -39.61 -0.34 -0.25 16 6 C -0.21 0.69 9.04 -39.43 -0.36 0.33 16 7 C 0.20 0.14 6.67 -39.22 -0.26 -0.12 16 8 O -0.25 -0.57 7.68 -49.79 -0.38 -0.95 16 9 C 0.03 -0.07 5.22 36.00 0.19 0.12 16 10 C 0.51 0.37 7.87 -10.99 -0.09 0.29 16 11 O -0.50 -3.07 16.16 -14.35 -0.23 -3.31 16 12 N -0.72 1.54 5.08 -53.81 -0.27 1.26 16 13 C 0.15 -0.13 2.46 -67.93 -0.17 -0.30 16 14 H 0.09 0.10 7.58 -51.93 -0.39 -0.29 16 15 C -0.13 0.08 5.35 -26.73 -0.14 -0.07 16 16 C -0.15 0.23 5.64 -26.73 -0.15 0.08 16 17 C 0.10 -0.18 3.77 -26.73 -0.10 -0.28 16 18 H 0.06 -0.13 8.14 -51.93 -0.42 -0.55 16 19 O -0.56 0.65 11.97 -35.23 -0.42 0.23 16 20 C -0.11 0.20 5.66 -26.73 -0.15 0.05 16 21 C -0.12 0.26 5.24 -26.73 -0.14 0.12 16 22 C -0.08 -0.21 6.87 -79.81 -0.55 -0.76 16 23 N 0.03 0.19 4.45 34.03 0.15 0.34 16 24 O -0.18 -1.30 18.45 -29.46 -0.54 -1.84 16 25 O -0.12 -1.03 17.24 -36.49 -0.63 -1.65 16 26 C 0.01 0.00 9.11 -39.61 -0.36 -0.36 16 27 H 0.38 -2.14 8.70 45.56 0.40 -1.74 16 28 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 29 H -0.25 0.00 7.11 56.52 0.40 0.40 16 30 H -0.25 0.50 7.11 56.52 0.40 0.90 16 31 H 0.15 -0.97 4.87 -52.49 -0.26 -1.23 16 32 H 0.16 -1.07 6.30 -52.49 -0.33 -1.40 16 33 H 0.10 -0.56 7.65 -51.93 -0.40 -0.96 16 34 H 0.10 -0.58 7.67 -51.93 -0.40 -0.98 16 35 H 0.40 -2.15 8.60 -40.82 -0.35 -2.50 16 36 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 37 H 0.07 -0.06 7.68 -51.93 -0.40 -0.46 16 38 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 40 H 0.38 -1.63 9.08 45.56 0.41 -1.21 16 41 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 42 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 43 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 44 H 0.08 -0.14 7.68 -51.93 -0.40 -0.54 16 45 H 0.16 0.10 7.61 -52.48 -0.40 -0.30 16 LS Contribution 375.96 15.07 5.67 5.67 Total: 0.00 -12.96 375.96 -10.35 -23.31 By element: Atomic # 1 Polarization: -9.58 SS G_CDS: -5.08 Total: -14.67 kcal Atomic # 6 Polarization: 1.97 SS G_CDS: -3.08 Total: -1.11 kcal Atomic # 7 Polarization: 1.72 SS G_CDS: -0.12 Total: 1.60 kcal Atomic # 8 Polarization: -4.45 SS G_CDS: -2.66 Total: -7.10 kcal Atomic # 14 Polarization: -2.63 SS G_CDS: -5.06 Total: -7.69 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -12.96 -10.35 -23.31 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_4549638.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.739 kcal (2) G-P(sol) polarization free energy of solvation -12.962 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.701 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.345 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.308 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.047 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds