Wall clock time and date at job start Sat Mar 6 2021 17:56:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35983 * 116.99616 * 2 1 4 4 C 1.38680 * 119.99760 * 179.97438 * 3 2 1 5 5 C 1.38151 * 119.99629 * 180.02562 * 4 3 2 6 6 C 1.50704 * 119.99412 * 180.02562 * 5 4 3 7 7 O 1.42897 * 109.47043 * 104.98096 * 6 5 4 8 8 Si 1.86303 * 109.47366 * 344.97731 * 6 5 4 9 9 C 1.38672 * 120.00265 * 0.02562 * 5 4 3 10 10 O 1.35982 * 119.99877 * 180.02562 * 9 5 4 11 11 C 1.42907 * 116.99856 * 179.97438 * 10 9 5 12 12 C 1.50696 * 109.47004 * 180.02562 * 11 10 9 13 13 O 1.21288 * 120.00036 * 359.97438 * 12 11 10 14 14 N 1.34777 * 120.00081 * 180.02562 * 12 11 10 15 15 C 1.46506 * 119.99949 * 180.02562 * 14 12 11 16 16 H 1.09000 * 109.47020 * 324.99485 * 15 14 12 17 17 C 1.52999 * 109.47075 * 84.99839 * 15 14 12 18 18 C 1.52997 * 109.47317 * 59.99940 * 17 15 14 19 19 C 1.53000 * 109.47060 * 59.99960 * 18 17 15 20 20 H 1.08992 * 109.47399 * 59.99823 * 19 18 17 21 21 O 1.42903 * 109.46726 * 180.02562 * 19 18 17 22 22 C 1.53002 * 109.47233 * 299.99657 * 19 18 17 23 23 C 1.52997 * 109.46817 * 60.00194 * 22 19 18 24 24 C 1.38715 * 120.00015 * 0.27318 * 9 5 4 25 25 C 1.38109 * 119.99859 * 359.44673 * 24 9 5 26 26 H 1.08987 * 109.47425 * 299.99773 * 1 2 3 27 27 H 1.08999 * 109.46823 * 60.00837 * 1 2 3 28 28 H 1.09005 * 109.46915 * 179.97438 * 1 2 3 29 29 H 1.08003 * 119.99567 * 0.04304 * 4 3 2 30 30 H 1.08999 * 109.46719 * 224.97694 * 6 5 4 31 31 H 0.96702 * 113.99883 * 59.99511 * 7 6 5 32 32 H 1.48497 * 109.99821 * 178.68090 * 8 6 5 33 33 H 1.48497 * 109.99981 * 300.00212 * 8 6 5 34 34 H 1.08990 * 109.47115 * 60.00084 * 11 10 9 35 35 H 1.08997 * 109.46682 * 299.99958 * 11 10 9 36 36 H 0.97000 * 120.00195 * 359.97438 * 14 12 11 37 37 H 1.08996 * 109.46929 * 299.99044 * 17 15 14 38 38 H 1.09002 * 109.46716 * 179.97438 * 17 15 14 39 39 H 1.09002 * 109.47153 * 299.99641 * 18 17 15 40 40 H 1.09001 * 109.46832 * 179.97438 * 18 17 15 41 41 H 0.96700 * 113.99509 * 179.97438 * 21 19 18 42 42 H 1.08993 * 109.47662 * 180.02562 * 22 19 18 43 43 H 1.09002 * 109.47075 * 300.00932 * 22 19 18 44 44 H 1.09002 * 109.47153 * 60.00231 * 23 22 19 45 45 H 1.09001 * 109.47289 * 180.02562 * 23 22 19 46 46 H 1.08001 * 120.00295 * 179.71092 * 24 9 5 47 47 H 1.08006 * 120.00033 * 180.25411 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 0.0005 5 6 4.0583 2.5153 0.0011 6 6 5.5633 2.5941 0.0011 7 8 6.0207 2.9674 -1.3002 8 14 6.2723 0.9323 0.4556 9 6 3.3030 3.6782 0.0016 10 8 3.9203 4.8899 0.0016 11 6 3.0803 6.0460 0.0016 12 6 3.9344 7.2875 0.0010 13 8 5.1435 7.1917 0.0010 14 7 3.3548 8.5042 0.0014 15 6 4.1852 9.7112 0.0002 16 1 5.0853 9.5335 0.5887 17 6 4.5763 10.0598 -1.4373 18 6 3.3128 10.3092 -2.2634 19 6 2.5255 11.4705 -1.6531 20 1 3.1433 12.3685 -1.6540 21 8 1.3452 11.7030 -2.4244 22 6 2.1344 11.1219 -0.2156 23 6 3.3978 10.8725 0.6104 24 6 1.9178 3.6056 0.0073 25 6 1.2908 2.3750 0.0010 26 1 -0.3633 0.5137 0.8899 27 1 -0.3633 0.5137 -0.8901 28 1 -0.3633 -1.0277 -0.0005 29 1 4.0194 0.3785 0.0003 30 1 5.8880 3.3388 0.7278 31 1 5.6900 3.8244 -1.6025 32 1 7.7560 0.9884 0.4281 33 1 5.8041 0.5328 1.8070 34 1 2.4511 6.0379 0.8915 35 1 2.4511 6.0378 -0.8884 36 1 2.3878 8.5808 0.0017 37 1 5.1373 9.2325 -1.8720 38 1 5.1937 10.9580 -1.4382 39 1 2.6950 9.4112 -2.2626 40 1 3.5915 10.5580 -3.2874 41 1 0.7960 12.4272 -2.0942 42 1 1.5731 11.9490 0.2190 43 1 1.5166 10.2238 -0.2148 44 1 4.0156 11.7705 0.6096 45 1 3.1192 10.6237 1.6344 46 1 1.3295 4.5113 0.0125 47 1 0.2122 2.3184 0.0013 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_4974302.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:56:05 Heat of formation + Delta-G solvation = -167.035545 kcal Electronic energy + Delta-G solvation = -29933.021464 eV Core-core repulsion = 25662.001634 eV Total energy + Delta-G solvation = -4271.019831 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -41.89669 -41.31126 -40.15658 -39.38826 -38.13696 -37.05575 -36.87331 -34.21209 -32.83251 -31.92634 -31.22560 -30.28163 -28.75418 -27.92497 -26.60712 -24.09637 -23.75739 -23.15095 -22.43471 -22.06127 -20.31733 -19.53555 -18.83487 -18.65535 -18.22697 -18.08583 -17.53336 -17.48586 -16.89963 -16.63491 -16.42537 -16.14441 -15.84813 -15.60820 -15.47313 -15.31369 -15.15495 -14.66660 -14.50760 -14.24716 -14.13485 -14.05896 -13.85275 -13.55406 -13.45951 -13.34009 -13.05373 -12.95030 -12.54483 -12.31254 -12.22802 -12.20745 -12.04206 -11.73446 -11.46493 -11.32727 -11.29745 -11.24748 -11.01451 -10.77538 -10.19764 -10.11520 -8.84078 -4.94351 0.04656 0.31464 1.32457 1.40590 1.43694 1.57276 1.90490 2.33754 2.52429 2.56273 3.22395 3.44161 3.52230 3.61435 3.67292 3.72187 3.83810 3.91192 3.99777 4.01539 4.07258 4.08761 4.10916 4.13283 4.19718 4.26227 4.34263 4.40103 4.44130 4.44316 4.44812 4.57160 4.68405 4.78960 4.83913 4.94506 4.96390 5.02071 5.07036 5.10141 5.10724 5.18918 5.21553 5.29564 5.38646 5.42363 6.10290 6.37752 6.43889 6.49602 6.88204 7.07577 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.332 6.332 3 C 0.091 3.909 4 C -0.118 4.118 5 C -0.118 4.118 6 C -0.082 4.082 7 O -0.545 6.545 8 Si 0.812 3.188 9 C 0.089 3.911 10 O -0.315 6.315 11 C 0.037 3.963 12 C 0.513 3.487 13 O -0.568 6.568 14 N -0.704 5.704 15 C 0.145 3.855 16 H 0.074 0.926 17 C -0.125 4.125 18 C -0.110 4.110 19 C 0.103 3.897 20 H 0.061 0.939 21 O -0.589 6.589 22 C -0.147 4.147 23 C -0.118 4.118 24 C -0.160 4.160 25 C -0.161 4.161 26 H 0.066 0.934 27 H 0.067 0.933 28 H 0.115 0.885 29 H 0.153 0.847 30 H 0.061 0.939 31 H 0.371 0.629 32 H -0.294 1.294 33 H -0.263 1.263 34 H 0.122 0.878 35 H 0.122 0.878 36 H 0.415 0.585 37 H 0.052 0.948 38 H 0.085 0.915 39 H 0.065 0.935 40 H 0.058 0.942 41 H 0.395 0.605 42 H 0.087 0.913 43 H 0.074 0.926 44 H 0.091 0.909 45 H 0.084 0.916 46 H 0.166 0.834 47 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.194 3.836 1.564 11.003 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.246 6.246 3 C 0.046 3.954 4 C -0.136 4.136 5 C -0.119 4.119 6 C -0.189 4.189 7 O -0.351 6.351 8 Si 0.713 3.287 9 C 0.044 3.956 10 O -0.229 6.229 11 C -0.041 4.041 12 C 0.299 3.701 13 O -0.446 6.446 14 N -0.359 5.359 15 C 0.040 3.960 16 H 0.092 0.908 17 C -0.164 4.164 18 C -0.147 4.147 19 C 0.044 3.956 20 H 0.079 0.921 21 O -0.397 6.397 22 C -0.184 4.184 23 C -0.156 4.156 24 C -0.179 4.179 25 C -0.180 4.180 26 H 0.085 0.915 27 H 0.086 0.914 28 H 0.133 0.867 29 H 0.170 0.830 30 H 0.079 0.921 31 H 0.220 0.780 32 H -0.221 1.221 33 H -0.189 1.189 34 H 0.139 0.861 35 H 0.140 0.860 36 H 0.254 0.746 37 H 0.071 0.929 38 H 0.103 0.897 39 H 0.084 0.916 40 H 0.077 0.923 41 H 0.244 0.756 42 H 0.105 0.895 43 H 0.092 0.908 44 H 0.110 0.890 45 H 0.102 0.898 46 H 0.183 0.817 47 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -8.034 2.143 1.824 8.513 hybrid contribution -0.974 2.423 0.557 2.670 sum -9.009 4.565 2.381 10.376 Atomic orbital electron populations 1.23356 0.76380 1.05628 1.02355 1.86090 1.23389 1.26248 1.88914 1.18974 0.91936 0.85354 0.99139 1.20188 0.92430 0.96778 1.04214 1.19457 0.96032 0.90976 1.05478 1.25537 0.92822 1.12584 0.87980 1.86659 1.74201 1.42212 1.32033 0.92210 0.76240 0.78984 0.81291 1.18809 0.91742 0.84273 1.00810 1.86087 1.35464 1.11897 1.89446 1.22710 0.92728 0.82094 1.06584 1.20487 0.88353 0.85444 0.75780 1.90768 1.16499 1.87335 1.49988 1.45852 1.11277 1.04201 1.74594 1.21007 0.94434 0.84196 0.96331 0.90798 1.21837 0.97321 1.02150 0.95042 1.21403 0.95947 0.98266 0.99127 1.21846 0.86194 0.97432 0.90102 0.92081 1.86492 1.37361 1.58879 1.57006 1.22240 0.97951 1.03443 0.94814 1.21763 0.96735 0.97409 0.99686 1.21361 0.92077 1.00010 1.04411 1.21417 1.01601 0.90912 1.04060 0.91535 0.91442 0.86712 0.82995 0.92094 0.78042 1.22143 1.18889 0.86056 0.86038 0.74625 0.92941 0.89665 0.91625 0.92331 0.75552 0.89489 0.90765 0.89032 0.89774 0.81708 0.82116 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.79 10.50 -93.35 -0.98 -1.77 16 3 C 0.09 0.28 6.69 22.49 0.15 0.43 16 4 C -0.12 -0.57 8.59 22.35 0.19 -0.38 16 5 C -0.12 -0.78 5.27 -19.78 -0.10 -0.88 16 6 C -0.08 -0.71 2.33 71.24 0.17 -0.55 16 7 O -0.54 -5.76 12.65 -148.98 -1.89 -7.64 16 8 Si 0.81 4.61 30.17 68.60 2.07 6.68 16 9 C 0.09 0.37 6.62 22.49 0.15 0.52 16 10 O -0.32 -1.67 8.56 -74.31 -0.64 -2.30 16 11 C 0.04 -0.12 5.22 71.23 0.37 0.26 16 12 C 0.51 1.20 7.87 87.66 0.69 1.89 16 13 O -0.57 -7.59 16.16 15.98 0.26 -7.33 16 14 N -0.70 2.92 4.23 -442.51 -1.87 1.04 16 15 C 0.14 -0.39 2.78 44.99 0.13 -0.26 16 16 H 0.07 0.15 7.58 -2.39 -0.02 0.13 16 17 C -0.12 0.12 5.60 30.59 0.17 0.29 16 18 C -0.11 0.17 5.42 30.59 0.17 0.33 16 19 C 0.10 -0.48 3.47 30.60 0.11 -0.37 16 20 H 0.06 -0.33 8.14 -2.39 -0.02 -0.35 16 21 O -0.59 1.23 13.32 -148.98 -1.98 -0.75 16 22 C -0.15 1.32 5.37 30.59 0.16 1.48 16 23 C -0.12 0.95 5.61 30.60 0.17 1.12 16 24 C -0.16 0.26 9.03 22.35 0.20 0.46 16 25 C -0.16 0.22 9.03 22.35 0.20 0.42 16 26 H 0.07 -0.52 7.66 -2.39 -0.02 -0.54 16 27 H 0.07 -0.53 7.66 -2.39 -0.02 -0.54 16 28 H 0.11 -0.94 8.14 -2.38 -0.02 -0.96 16 29 H 0.15 0.30 5.13 -2.91 -0.01 0.28 16 30 H 0.06 0.69 7.82 -2.39 -0.02 0.67 16 31 H 0.37 3.07 8.60 -74.06 -0.64 2.43 16 32 H -0.29 -3.51 7.11 99.48 0.71 -2.81 16 33 H -0.26 -1.97 7.11 99.48 0.71 -1.26 16 34 H 0.12 -1.11 7.65 -2.39 -0.02 -1.13 16 35 H 0.12 -1.09 7.67 -2.39 -0.02 -1.10 16 36 H 0.42 -4.22 6.87 -92.71 -0.64 -4.86 16 37 H 0.05 0.23 8.14 -2.39 -0.02 0.21 16 38 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 39 H 0.07 -0.07 7.60 -2.39 -0.02 -0.09 16 40 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 41 H 0.39 -3.96 9.08 -74.06 -0.67 -4.63 16 42 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 43 H 0.07 -0.73 6.50 -2.39 -0.02 -0.75 16 44 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 45 H 0.08 -0.75 8.14 -2.39 -0.02 -0.77 16 46 H 0.17 -1.48 6.29 -2.91 -0.02 -1.50 16 47 H 0.16 -1.15 6.29 -2.91 -0.02 -1.17 16 Total: 0.00 -25.19 376.07 -1.88 -27.07 By element: Atomic # 1 Polarization: -19.89 SS G_CDS: -0.88 Total: -20.77 kcal Atomic # 6 Polarization: 1.74 SS G_CDS: 4.04 Total: 5.78 kcal Atomic # 7 Polarization: 2.92 SS G_CDS: -1.87 Total: 1.04 kcal Atomic # 8 Polarization: -14.57 SS G_CDS: -5.23 Total: -19.80 kcal Atomic # 14 Polarization: 4.61 SS G_CDS: 2.07 Total: 6.68 kcal Total: -25.19 -1.88 -27.07 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_4974302.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -139.970 kcal (2) G-P(sol) polarization free energy of solvation -25.187 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -165.157 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.878 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.066 kcal (6) G-S(sol) free energy of system = (1) + (5) -167.036 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds