Wall clock time and date at job start Sat Mar 6 2021 17:56:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 C 1.46899 * 111.00315 * 2 1 4 4 C 1.50696 * 109.46889 * 293.95364 * 3 2 1 5 5 O 1.21287 * 120.00051 * 359.97438 * 4 3 2 6 6 N 1.34783 * 120.00006 * 180.02562 * 4 3 2 7 7 C 1.46506 * 119.99811 * 179.97438 * 6 4 3 8 8 H 1.08993 * 109.47068 * 34.99431 * 7 6 4 9 9 C 1.52999 * 109.46691 * 155.00013 * 7 6 4 10 10 C 1.53006 * 109.46626 * 179.97438 * 9 7 6 11 11 C 1.52997 * 109.47127 * 299.99539 * 10 9 7 12 12 H 1.09002 * 109.47153 * 180.02562 * 11 10 9 13 13 O 1.42898 * 109.47319 * 300.00438 * 11 10 9 14 14 C 1.53002 * 109.46817 * 60.00361 * 11 10 9 15 15 C 1.52996 * 109.46972 * 299.99733 * 14 11 10 16 16 C 1.39676 * 110.99338 * 123.94707 * 2 1 3 17 17 C 1.38898 * 120.06921 * 116.04972 * 16 2 1 18 18 C 1.50697 * 120.04088 * 359.97438 * 17 16 2 19 19 O 1.42899 * 109.47324 * 285.00595 * 18 17 16 20 20 Si 1.86296 * 109.47319 * 165.00210 * 18 17 16 21 21 C 1.38123 * 119.92391 * 179.97438 * 17 16 2 22 22 C 1.38274 * 120.07544 * 0.02562 * 21 17 16 23 23 C 1.50694 * 119.92587 * 179.97438 * 22 21 17 24 24 F 1.39896 * 109.47024 * 89.99956 * 23 22 21 25 25 F 1.39901 * 109.47137 * 210.00270 * 23 22 21 26 26 F 1.39903 * 109.47079 * 329.99859 * 23 22 21 27 27 C 1.38309 * 120.14784 * 359.97438 * 22 21 17 28 28 C 1.38085 * 120.07410 * 359.74223 * 27 22 21 29 29 H 1.09006 * 109.46577 * 60.00302 * 1 2 3 30 30 H 1.08995 * 109.47253 * 179.97438 * 1 2 3 31 31 H 1.09005 * 109.47243 * 300.00553 * 1 2 3 32 32 H 1.08997 * 109.47389 * 173.94702 * 3 2 1 33 33 H 1.09002 * 109.47068 * 53.94968 * 3 2 1 34 34 H 0.97000 * 119.99910 * 359.97438 * 6 4 3 35 35 H 1.08993 * 109.47839 * 59.99891 * 9 7 6 36 36 H 1.09000 * 109.47160 * 299.99453 * 9 7 6 37 37 H 1.09001 * 109.46801 * 59.99811 * 10 9 7 38 38 H 1.09001 * 109.46998 * 179.97438 * 10 9 7 39 39 H 0.96701 * 113.99881 * 180.02562 * 13 11 10 40 40 H 1.08996 * 109.47407 * 60.00219 * 14 11 10 41 41 H 1.09000 * 109.46986 * 179.97438 * 14 11 10 42 42 H 1.09001 * 109.46993 * 180.02562 * 15 14 11 43 43 H 1.09000 * 109.47380 * 299.99696 * 15 14 11 44 44 H 1.09009 * 109.47000 * 45.00198 * 18 17 16 45 45 H 0.96701 * 114.00431 * 59.99203 * 19 18 17 46 46 H 1.48504 * 109.99609 * 300.00024 * 20 18 17 47 47 H 1.48496 * 110.00256 * 61.31840 * 20 18 17 48 48 H 1.08002 * 119.96524 * 179.97438 * 21 17 16 49 49 H 1.07998 * 119.96107 * 180.02562 * 27 22 21 50 50 H 1.07992 * 120.03663 * 180.27843 * 28 27 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.6371 2.0470 -1.2984 5 8 1.0056 1.4452 -2.1411 6 7 2.0191 3.3198 -1.5238 7 6 1.6710 3.9764 -2.7863 8 1 0.6910 3.6324 -3.1166 9 6 1.6370 5.4921 -2.5804 10 6 1.2741 6.1779 -3.8991 11 6 2.3210 5.8307 -4.9594 12 1 2.0627 6.3197 -5.8988 13 8 3.6058 6.2815 -4.5258 14 6 2.3551 4.3150 -5.1653 15 6 2.7179 3.6293 -3.8467 16 6 1.9694 -0.7282 1.0818 17 6 2.7116 -1.8813 0.8608 18 6 2.9778 -2.3490 -0.5468 19 8 1.7908 -2.9330 -1.0872 20 14 4.3426 -3.6170 -0.5323 21 6 3.2055 -2.5988 1.9328 22 6 2.9613 -2.1707 3.2247 23 6 3.5012 -2.9564 4.3917 24 9 4.7746 -2.4820 4.7241 25 9 2.6468 -2.8075 5.4895 26 9 3.5834 -4.3093 4.0450 27 6 2.2227 -1.0229 3.4482 28 6 1.7310 -0.2977 2.3810 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3634 0.5139 0.8900 32 1 3.0798 1.3444 0.1084 33 1 1.5612 1.9273 0.8309 34 1 2.5245 3.8010 -0.8500 35 1 2.6170 5.8361 -2.2501 36 1 0.8914 5.7394 -1.8246 37 1 0.2940 5.8339 -4.2298 38 1 1.2494 7.2577 -3.7523 39 1 4.3197 6.0948 -5.1508 40 1 1.3751 3.9711 -5.4961 41 1 3.1006 4.0677 -5.9211 42 1 2.7427 2.5495 -3.9935 43 1 3.6980 3.9731 -3.5159 44 1 3.2771 -1.4999 -1.1613 45 1 1.0370 -2.3284 -1.1251 46 1 5.5827 -3.0219 0.0275 47 1 3.9342 -4.7937 0.2762 48 1 3.7823 -3.4958 1.7617 49 1 2.0341 -0.6911 4.4585 50 1 1.1581 0.6009 2.5561 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12892148_6406254.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:56:20 Heat of formation + Delta-G solvation = -225.350396 kcal Electronic energy + Delta-G solvation = -37618.979235 eV Core-core repulsion = 32197.931991 eV Total energy + Delta-G solvation = -5421.047244 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.165 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -51.38534 -48.91003 -48.84707 -41.88654 -40.98499 -39.71321 -37.81324 -37.60757 -36.53068 -34.28057 -33.12299 -32.26324 -31.80968 -30.48807 -28.65400 -27.68713 -27.00403 -25.21966 -23.85955 -23.73646 -23.00530 -22.08442 -21.43047 -20.75923 -19.73833 -19.68559 -19.57652 -18.53311 -18.19494 -17.91417 -17.73113 -17.17613 -16.97224 -16.66046 -16.36330 -16.23761 -15.85072 -15.77213 -15.71835 -15.64500 -15.45004 -15.27571 -15.07944 -15.02030 -15.00539 -14.86878 -14.70161 -14.41690 -14.15152 -14.00733 -13.96418 -13.73054 -13.55570 -13.35413 -13.20719 -13.06094 -12.98957 -12.82662 -12.65778 -12.41609 -12.31278 -12.00994 -11.58082 -11.45777 -11.23770 -11.08898 -10.94906 -10.64657 -10.37355 -10.20735 -10.04534 -9.69688 -4.90433 -0.50225 -0.13271 1.29903 1.41736 1.55229 1.61285 1.86304 1.89848 2.05230 2.47069 2.65968 2.77007 3.17577 3.39772 3.40429 3.45331 3.59066 3.74654 3.76188 3.80304 3.94351 3.96049 4.01263 4.02656 4.09669 4.12028 4.23510 4.25430 4.32808 4.39814 4.42405 4.45435 4.48158 4.52680 4.53338 4.67556 4.79569 4.83853 4.91773 4.95539 4.98908 5.06014 5.06943 5.16340 5.17606 5.25702 5.28426 5.38958 5.51975 5.57135 6.00610 6.55936 6.59009 6.90467 7.26669 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 N -0.502 5.502 3 C 0.038 3.962 4 C 0.516 3.484 5 O -0.556 6.556 6 N -0.717 5.717 7 C 0.152 3.848 8 H 0.069 0.931 9 C -0.114 4.114 10 C -0.114 4.114 11 C 0.103 3.897 12 H 0.064 0.936 13 O -0.579 6.579 14 C -0.147 4.147 15 C -0.118 4.118 16 C 0.136 3.864 17 C -0.099 4.099 18 C -0.071 4.071 19 O -0.544 6.544 20 Si 0.788 3.212 21 C -0.083 4.083 22 C -0.187 4.187 23 C 0.507 3.493 24 F -0.179 7.179 25 F -0.173 7.173 26 F -0.185 7.185 27 C -0.052 4.052 28 C -0.135 4.135 29 H 0.085 0.915 30 H 0.072 0.928 31 H 0.048 0.952 32 H 0.119 0.881 33 H 0.100 0.900 34 H 0.413 0.587 35 H 0.074 0.926 36 H 0.074 0.926 37 H 0.084 0.916 38 H 0.074 0.926 39 H 0.390 0.610 40 H 0.071 0.929 41 H 0.075 0.925 42 H 0.046 0.954 43 H 0.070 0.930 44 H 0.089 0.911 45 H 0.372 0.628 46 H -0.261 1.261 47 H -0.287 1.287 48 H 0.126 0.874 49 H 0.161 0.839 50 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.084 7.532 -1.856 7.757 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.223 5.223 3 C -0.091 4.091 4 C 0.302 3.698 5 O -0.434 6.434 6 N -0.370 5.370 7 C 0.047 3.953 8 H 0.087 0.913 9 C -0.152 4.152 10 C -0.152 4.152 11 C 0.045 3.955 12 H 0.082 0.918 13 O -0.387 6.387 14 C -0.186 4.186 15 C -0.157 4.157 16 C 0.042 3.958 17 C -0.100 4.100 18 C -0.180 4.180 19 O -0.351 6.351 20 Si 0.690 3.310 21 C -0.102 4.102 22 C -0.189 4.189 23 C 0.453 3.547 24 F -0.160 7.160 25 F -0.154 7.154 26 F -0.167 7.167 27 C -0.071 4.071 28 C -0.154 4.154 29 H 0.103 0.897 30 H 0.090 0.910 31 H 0.066 0.934 32 H 0.137 0.863 33 H 0.118 0.882 34 H 0.250 0.750 35 H 0.093 0.907 36 H 0.093 0.907 37 H 0.102 0.898 38 H 0.093 0.907 39 H 0.239 0.761 40 H 0.090 0.910 41 H 0.093 0.907 42 H 0.065 0.935 43 H 0.088 0.912 44 H 0.107 0.893 45 H 0.221 0.779 46 H -0.187 1.187 47 H -0.214 1.214 48 H 0.144 0.856 49 H 0.178 0.822 50 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 0.202 6.110 -1.933 6.412 hybrid contribution -0.512 0.977 1.525 1.882 sum -0.310 7.087 -0.409 7.106 Atomic orbital electron populations 1.22657 0.83692 1.03313 1.02672 1.59169 1.10050 1.13280 1.39806 1.22158 1.03342 0.87970 0.95604 1.20654 0.78684 0.81677 0.88799 1.90702 1.40615 1.64514 1.47578 1.45977 1.57655 1.13360 1.19977 1.20892 0.98188 0.92625 0.83561 0.91283 1.21628 1.03056 0.92294 0.98226 1.21553 0.97912 1.01314 0.94390 1.21809 0.84104 0.92569 0.97059 0.91842 1.86464 1.18074 1.83394 1.50762 1.22193 1.02970 0.96029 0.97374 1.21722 0.99453 0.99369 0.95132 1.18831 0.94681 0.92783 0.89553 1.20328 0.98407 0.95209 0.96075 1.25205 0.95988 1.07070 0.89718 1.86672 1.21598 1.42043 1.84750 0.92385 0.74012 0.76347 0.88260 1.20793 0.98718 0.99072 0.91600 1.19982 1.06761 1.00166 0.91956 1.18388 0.75775 0.77543 0.82979 1.93233 1.41279 1.88098 1.93381 1.93205 1.70275 1.95404 1.56566 1.93197 1.96169 1.35245 1.92053 1.21133 0.92895 0.91296 1.01729 1.21964 1.00526 1.01571 0.91371 0.89650 0.90959 0.93382 0.86273 0.88221 0.75042 0.90711 0.90721 0.89771 0.90731 0.76062 0.91010 0.90654 0.93530 0.91167 0.89295 0.77862 1.18690 1.21413 0.85639 0.82184 0.81649 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 8.63 127.69 1.10 1.05 16 2 N -0.50 1.14 3.22 -724.42 -2.33 -1.20 16 3 C 0.04 -0.23 5.03 85.56 0.43 0.20 16 4 C 0.52 -0.59 7.52 87.65 0.66 0.07 16 5 O -0.56 -3.93 13.97 -3.05 -0.04 -3.98 16 6 N -0.72 3.46 5.08 -442.52 -2.25 1.22 16 7 C 0.15 -0.35 2.46 44.99 0.11 -0.24 16 8 H 0.07 0.12 7.58 -2.39 -0.02 0.10 16 9 C -0.11 0.51 5.25 30.60 0.16 0.67 16 10 C -0.11 0.46 5.66 30.60 0.17 0.63 16 11 C 0.10 -0.40 3.77 30.59 0.12 -0.28 16 12 H 0.06 -0.32 8.14 -2.39 -0.02 -0.34 16 13 O -0.58 1.47 11.97 -148.98 -1.78 -0.32 16 14 C -0.15 0.49 5.64 30.59 0.17 0.67 16 15 C -0.12 0.14 5.35 30.59 0.16 0.31 16 16 C 0.14 -0.17 4.61 38.22 0.18 0.01 16 17 C -0.10 -0.29 5.28 -19.73 -0.10 -0.39 16 18 C -0.07 -0.22 2.30 71.24 0.16 -0.05 16 19 O -0.54 -3.02 12.65 -148.98 -1.89 -4.90 16 20 Si 0.79 1.90 30.41 68.60 2.09 3.98 16 21 C -0.08 -0.42 8.01 22.25 0.18 -0.24 16 22 C -0.19 -0.59 5.46 -19.84 -0.11 -0.70 16 23 C 0.51 2.70 3.36 71.23 0.24 2.94 16 24 F -0.18 -1.13 17.30 44.97 0.78 -0.35 16 25 F -0.17 -0.81 16.46 44.97 0.74 -0.07 16 26 F -0.19 -1.55 16.46 44.97 0.74 -0.81 16 27 C -0.05 0.11 9.39 22.25 0.21 0.32 16 28 C -0.13 0.61 8.70 22.40 0.19 0.80 16 29 H 0.08 0.12 5.88 -2.38 -0.01 0.11 16 30 H 0.07 -0.15 7.53 -2.39 -0.02 -0.16 16 31 H 0.05 -0.28 7.49 -2.38 -0.02 -0.30 16 32 H 0.12 -0.96 8.06 -2.39 -0.02 -0.98 16 33 H 0.10 -1.13 7.46 -2.39 -0.02 -1.15 16 34 H 0.41 -4.17 8.60 -92.71 -0.80 -4.97 16 35 H 0.07 -0.25 7.68 -2.39 -0.02 -0.27 16 36 H 0.07 -0.43 8.14 -2.39 -0.02 -0.45 16 37 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 38 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 39 H 0.39 -3.45 9.08 -74.06 -0.67 -4.12 16 40 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 41 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 42 H 0.05 0.15 8.14 -2.39 -0.02 0.13 16 43 H 0.07 -0.08 7.68 -2.39 -0.02 -0.10 16 44 H 0.09 0.16 7.78 -2.38 -0.02 0.14 16 45 H 0.37 1.12 7.59 -74.06 -0.56 0.56 16 46 H -0.26 -1.18 7.11 99.48 0.71 -0.48 16 47 H -0.29 -2.45 6.81 99.48 0.68 -1.77 16 48 H 0.13 0.86 4.48 -2.91 -0.01 0.84 16 49 H 0.16 -0.96 7.60 -2.91 -0.02 -0.98 16 50 H 0.17 -1.70 7.16 -2.91 -0.02 -1.72 16 Total: 0.00 -16.99 406.48 -0.91 -17.90 By element: Atomic # 1 Polarization: -16.21 SS G_CDS: -1.00 Total: -17.21 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: 4.04 Total: 5.74 kcal Atomic # 7 Polarization: 4.60 SS G_CDS: -4.58 Total: 0.02 kcal Atomic # 8 Polarization: -5.49 SS G_CDS: -3.71 Total: -9.20 kcal Atomic # 9 Polarization: -3.49 SS G_CDS: 2.26 Total: -1.23 kcal Atomic # 14 Polarization: 1.90 SS G_CDS: 2.09 Total: 3.98 kcal Total: -16.99 -0.91 -17.90 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_6406254.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -207.450 kcal (2) G-P(sol) polarization free energy of solvation -16.987 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -224.437 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.913 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.900 kcal (6) G-S(sol) free energy of system = (1) + (5) -225.350 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds