Wall clock time and date at job start Sat Mar 6 2021 17:56:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86304 * 109.46966 * 2 1 4 4 C 1.50688 * 109.47315 * 120.00319 * 2 1 3 5 5 C 1.34236 * 126.50278 * 255.26894 * 4 2 1 6 6 N 1.36834 * 109.93905 * 180.20350 * 5 4 2 7 7 C 1.46506 * 125.06131 * 179.81118 * 6 5 4 8 8 C 1.50696 * 109.47534 * 264.70123 * 7 6 5 9 9 O 1.21286 * 119.99720 * 0.02562 * 8 7 6 10 10 N 1.34771 * 120.00034 * 180.02562 * 8 7 6 11 11 C 1.46500 * 120.00215 * 180.02562 * 10 8 7 12 12 H 1.09006 * 109.47173 * 325.00344 * 11 10 8 13 13 C 1.53009 * 109.46972 * 84.99685 * 11 10 8 14 14 C 1.52997 * 109.46843 * 180.02562 * 13 11 10 15 15 C 1.53001 * 109.47050 * 300.00019 * 14 13 11 16 16 H 1.09008 * 109.47298 * 180.02562 * 15 14 13 17 17 O 1.42903 * 109.47171 * 299.99915 * 15 14 13 18 18 C 1.52999 * 109.47329 * 60.00237 * 15 14 13 19 19 C 1.52997 * 109.46862 * 299.99879 * 18 15 14 20 20 C 1.37690 * 109.87525 * 359.55485 * 6 5 4 21 21 C 1.39082 * 133.51538 * 180.28347 * 20 6 5 22 22 C 1.37787 * 119.78189 * 179.97438 * 21 20 6 23 23 C 1.38796 * 120.66360 * 0.02562 * 22 21 20 24 24 C 1.36660 * 120.52689 * 359.95936 * 23 22 21 25 25 C 1.39592 * 119.76501 * 0.03960 * 24 23 22 26 26 H 0.96698 * 113.99594 * 299.99904 * 1 2 3 27 27 H 1.09006 * 109.46946 * 240.00633 * 2 1 3 28 28 H 1.48496 * 109.99988 * 300.00439 * 3 2 1 29 29 H 1.48506 * 109.99742 * 61.32506 * 3 2 1 30 30 H 1.07997 * 125.03144 * 0.04328 * 5 4 2 31 31 H 1.09004 * 109.46470 * 144.69825 * 7 6 5 32 32 H 1.09001 * 109.46937 * 24.70757 * 7 6 5 33 33 H 0.96996 * 120.00472 * 359.97438 * 10 8 7 34 34 H 1.08997 * 109.47270 * 300.00197 * 13 11 10 35 35 H 1.08997 * 109.46854 * 60.00323 * 13 11 10 36 36 H 1.08999 * 109.46989 * 180.02562 * 14 13 11 37 37 H 1.08997 * 109.47549 * 60.00238 * 14 13 11 38 38 H 0.96700 * 114.00311 * 300.00378 * 17 15 14 39 39 H 1.08997 * 109.46819 * 60.00057 * 18 15 14 40 40 H 1.08997 * 109.47286 * 180.02562 * 18 15 14 41 41 H 1.09009 * 109.46962 * 179.97438 * 19 18 15 42 42 H 1.08997 * 109.47549 * 299.99731 * 19 18 15 43 43 H 1.07998 * 120.11280 * 359.94743 * 21 20 6 44 44 H 1.07997 * 119.67332 * 179.97438 * 22 21 20 45 45 H 1.07994 * 119.73697 * 179.97438 * 23 22 21 46 46 H 1.08007 * 120.11815 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2303 5 6 2.4563 -0.1374 2.3249 6 7 2.8042 -1.0992 3.2338 7 6 3.4099 -0.8407 4.5425 8 6 4.9081 -0.9632 4.4357 9 8 5.4196 -1.2388 3.3711 10 7 5.6795 -0.7665 5.5231 11 6 7.1360 -0.8850 5.4192 12 1 7.3867 -1.6692 4.7048 13 6 7.7233 0.4452 4.9430 14 6 9.2443 0.3212 4.8338 15 6 9.8268 -0.0321 6.2038 16 1 10.9105 -0.1200 6.1262 17 8 9.4987 0.9960 7.1405 18 6 9.2396 -1.3623 6.6800 19 6 7.7186 -1.2383 6.7891 20 6 2.4948 -2.3459 2.7378 21 6 2.6297 -3.6364 3.2386 22 6 2.2150 -4.7108 2.4823 23 6 1.6634 -4.5193 1.2231 24 6 1.5213 -3.2600 0.7117 25 6 1.9347 -2.1571 1.4609 26 1 -0.3932 0.4417 0.7651 27 1 1.7924 -0.5138 -0.8901 28 1 1.5614 2.4679 -1.2084 29 1 1.5880 2.4585 1.2244 30 1 2.5872 0.9253 2.4661 31 1 3.0366 -1.5663 5.2653 32 1 3.1501 0.1657 4.8707 33 1 5.2706 -0.5457 6.3745 34 1 7.3086 0.6968 3.9669 35 1 7.4726 1.2294 5.6573 36 1 9.6627 1.2690 4.4950 37 1 9.4946 -0.4629 4.1193 38 1 9.8397 1.8689 6.9020 39 1 9.4899 -2.1464 5.9655 40 1 9.6542 -1.6138 7.6561 41 1 7.3001 -2.1861 7.1279 42 1 7.4682 -0.4542 7.5036 43 1 3.0585 -3.7958 4.2169 44 1 2.3210 -5.7122 2.8727 45 1 1.3437 -5.3723 0.6429 46 1 1.0908 -3.1186 -0.2687 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12892148_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 17:56:41 Heat of formation + Delta-G solvation = -52.569276 kcal Electronic energy + Delta-G solvation = -28650.160604 eV Core-core repulsion = 24699.590596 eV Total energy + Delta-G solvation = -3950.570008 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.47481 -41.09893 -39.71218 -38.02657 -37.62155 -36.69945 -34.48767 -33.92853 -31.95137 -31.47160 -30.15912 -30.04186 -28.50543 -25.73578 -23.95260 -23.81398 -23.32414 -22.42963 -21.59047 -21.01155 -20.54685 -18.67060 -18.47163 -17.89677 -17.71919 -17.40447 -16.99977 -16.55396 -16.29548 -16.22292 -15.96445 -15.75021 -15.44648 -15.24600 -14.77917 -14.61189 -14.52821 -14.32813 -14.13247 -13.98375 -13.82960 -13.47218 -13.34216 -13.19680 -13.15313 -12.60141 -12.56153 -12.43778 -12.27887 -12.15262 -11.87302 -11.70154 -11.62145 -11.38399 -11.11200 -10.80956 -10.40360 -10.34644 -10.16006 -9.01449 -8.52143 -4.86310 0.28754 0.80917 1.39025 1.43297 1.44494 1.62341 1.71395 2.02782 2.14531 3.12098 3.18787 3.43440 3.49559 3.59315 3.60925 3.65555 3.75332 3.83284 3.86029 3.87125 3.94956 4.07217 4.10899 4.27914 4.32408 4.36924 4.37627 4.38629 4.52561 4.60490 4.73324 4.77786 4.82054 4.82164 4.91500 4.92929 5.00323 5.03575 5.04575 5.15128 5.23359 5.26665 5.40170 5.65686 5.82003 5.87556 5.90996 6.18889 6.34100 6.39013 6.60215 6.60527 7.05186 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.036 4.036 3 Si 0.682 3.318 4 C -0.193 4.193 5 C 0.066 3.934 6 N -0.465 5.465 7 C 0.090 3.910 8 C 0.492 3.508 9 O -0.512 6.512 10 N -0.725 5.725 11 C 0.147 3.853 12 H 0.087 0.913 13 C -0.124 4.124 14 C -0.150 4.150 15 C 0.102 3.898 16 H 0.058 0.942 17 O -0.564 6.564 18 C -0.109 4.109 19 C -0.123 4.123 20 C 0.109 3.891 21 C -0.128 4.128 22 C -0.096 4.096 23 C -0.146 4.146 24 C -0.065 4.065 25 C -0.086 4.086 26 H 0.372 0.628 27 H 0.114 0.886 28 H -0.255 1.255 29 H -0.261 1.261 30 H 0.168 0.832 31 H 0.117 0.883 32 H 0.121 0.879 33 H 0.401 0.599 34 H 0.066 0.934 35 H 0.071 0.929 36 H 0.069 0.931 37 H 0.075 0.925 38 H 0.378 0.622 39 H 0.079 0.921 40 H 0.076 0.924 41 H 0.068 0.932 42 H 0.078 0.922 43 H 0.114 0.886 44 H 0.125 0.875 45 H 0.123 0.877 46 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.226 1.844 5.175 6.371 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.147 4.147 3 Si 0.583 3.417 4 C -0.201 4.201 5 C -0.059 4.059 6 N -0.148 5.148 7 C -0.036 4.036 8 C 0.275 3.725 9 O -0.386 6.386 10 N -0.377 5.377 11 C 0.043 3.957 12 H 0.105 0.895 13 C -0.162 4.162 14 C -0.189 4.189 15 C 0.043 3.957 16 H 0.076 0.924 17 O -0.370 6.370 18 C -0.147 4.147 19 C -0.161 4.161 20 C 0.005 3.995 21 C -0.148 4.148 22 C -0.116 4.116 23 C -0.165 4.165 24 C -0.083 4.083 25 C -0.090 4.090 26 H 0.220 0.780 27 H 0.132 0.868 28 H -0.180 1.180 29 H -0.185 1.185 30 H 0.185 0.815 31 H 0.135 0.865 32 H 0.139 0.861 33 H 0.235 0.765 34 H 0.085 0.915 35 H 0.089 0.911 36 H 0.088 0.912 37 H 0.093 0.907 38 H 0.225 0.775 39 H 0.097 0.903 40 H 0.095 0.905 41 H 0.087 0.913 42 H 0.097 0.903 43 H 0.132 0.868 44 H 0.143 0.857 45 H 0.141 0.859 46 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 3.312 1.748 4.417 5.791 hybrid contribution -0.792 0.418 0.804 1.204 sum 2.520 2.166 5.221 6.189 Atomic orbital electron populations 1.86607 1.18160 1.79967 1.48953 1.24277 0.83274 1.09797 0.97369 0.95032 0.91804 0.74505 0.80368 1.20570 1.09914 0.92338 0.97252 1.21576 1.00897 0.93986 0.89428 1.43202 1.52363 1.04647 1.14613 1.21598 0.91015 1.05754 0.85202 1.20964 0.89368 0.77525 0.84609 1.90809 1.74616 1.45637 1.27544 1.46041 1.07351 1.72317 1.11995 1.21025 0.78307 0.98274 0.98093 0.89496 1.21801 0.95001 0.97512 1.01912 1.22218 0.96031 1.02747 0.97881 1.21814 0.97583 0.88422 0.87896 0.92412 1.86499 1.80383 1.20358 1.49783 1.21495 0.94977 0.95542 1.02703 1.21712 0.95744 1.02408 0.96195 1.18164 1.01168 0.85845 0.94329 1.19953 1.04982 0.89265 1.00639 1.20825 0.98337 0.97920 0.94487 1.20671 1.02472 0.96941 0.96412 1.20309 0.97943 0.90919 0.99179 1.18936 1.03409 0.92774 0.93922 0.78045 0.86794 1.18004 1.18544 0.81509 0.86517 0.86084 0.76457 0.91517 0.91061 0.91206 0.90654 0.77506 0.90273 0.90539 0.91338 0.90319 0.86773 0.85743 0.85931 0.85915 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.46 12.88 -35.23 -0.45 -1.91 16 2 C -0.04 -0.06 3.06 36.00 0.11 0.05 16 3 Si 0.68 0.04 30.83 -169.99 -5.24 -5.20 16 4 C -0.19 -0.51 5.57 -102.71 -0.57 -1.08 16 5 C 0.07 0.08 9.89 -16.73 -0.17 -0.08 16 6 N -0.47 -0.71 2.27 -115.71 -0.26 -0.97 16 7 C 0.09 -0.19 6.48 -5.19 -0.03 -0.22 16 8 C 0.49 0.09 7.86 -10.99 -0.09 0.00 16 9 O -0.51 -2.52 16.09 5.55 0.09 -2.43 16 10 N -0.72 1.57 5.08 -53.80 -0.27 1.29 16 11 C 0.15 -0.15 2.45 -67.93 -0.17 -0.32 16 12 H 0.09 0.10 7.58 -51.93 -0.39 -0.30 16 13 C -0.12 0.11 5.35 -26.73 -0.14 -0.03 16 14 C -0.15 0.27 5.64 -26.73 -0.15 0.11 16 15 C 0.10 -0.18 3.77 -26.73 -0.10 -0.28 16 16 H 0.06 -0.13 8.14 -51.92 -0.42 -0.55 16 17 O -0.56 0.64 11.97 -35.23 -0.42 0.22 16 18 C -0.11 0.19 5.66 -26.73 -0.15 0.04 16 19 C -0.12 0.24 5.25 -26.73 -0.14 0.10 16 20 C 0.11 0.40 6.80 -83.99 -0.57 -0.17 16 21 C -0.13 -0.35 10.00 -39.43 -0.39 -0.75 16 22 C -0.10 -0.23 10.01 -39.54 -0.40 -0.62 16 23 C -0.15 -0.40 9.97 -39.95 -0.40 -0.80 16 24 C -0.06 -0.25 10.05 -39.65 -0.40 -0.64 16 25 C -0.09 -0.37 6.35 -105.14 -0.67 -1.04 16 26 H 0.37 -0.11 8.70 45.56 0.40 0.29 16 27 H 0.11 0.17 7.96 -51.93 -0.41 -0.24 16 28 H -0.26 -0.81 7.11 56.52 0.40 -0.40 16 29 H -0.26 -0.24 6.99 56.52 0.40 0.15 16 30 H 0.17 -0.23 6.27 -52.49 -0.33 -0.56 16 31 H 0.12 -0.48 8.14 -51.93 -0.42 -0.90 16 32 H 0.12 -0.62 8.12 -51.93 -0.42 -1.04 16 33 H 0.40 -1.98 8.60 -40.82 -0.35 -2.33 16 34 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 35 H 0.07 -0.07 7.68 -51.93 -0.40 -0.46 16 36 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 38 H 0.38 -1.64 9.08 45.56 0.41 -1.22 16 39 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 40 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.07 -0.16 8.14 -51.92 -0.42 -0.58 16 42 H 0.08 -0.12 7.68 -51.93 -0.40 -0.51 16 43 H 0.11 0.10 8.06 -52.49 -0.42 -0.32 16 44 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 45 H 0.12 0.10 8.06 -52.49 -0.42 -0.32 16 46 H 0.12 0.35 8.06 -52.48 -0.42 -0.08 16 LS Contribution 376.43 15.07 5.67 5.67 Total: 0.00 -9.99 376.43 -11.49 -21.48 By element: Atomic # 1 Polarization: -6.23 SS G_CDS: -6.17 Total: -12.40 kcal Atomic # 6 Polarization: -1.31 SS G_CDS: -4.43 Total: -5.74 kcal Atomic # 7 Polarization: 0.86 SS G_CDS: -0.54 Total: 0.32 kcal Atomic # 8 Polarization: -3.34 SS G_CDS: -0.79 Total: -4.13 kcal Atomic # 14 Polarization: 0.04 SS G_CDS: -5.24 Total: -5.20 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -9.99 -11.49 -21.48 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12892148_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.090 kcal (2) G-P(sol) polarization free energy of solvation -9.989 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.079 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.490 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.479 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.569 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds