Wall clock time and date at job start Sat Mar 6 2021 22:22:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35655 * 116.99688 * 2 1 4 4 C 1.40142 * 120.14682 * 179.97438 * 3 2 1 5 5 C 1.47537 * 120.19039 * 359.95009 * 4 3 2 6 6 O 1.21586 * 120.00480 * 0.02562 * 5 4 3 7 7 N 1.34777 * 119.99803 * 179.97438 * 5 4 3 8 8 C 1.46499 * 120.00197 * 180.02562 * 7 5 4 9 9 C 1.52998 * 109.47249 * 180.02562 * 8 7 5 10 10 H 1.08994 * 112.85244 * 43.80492 * 9 8 7 11 11 C 1.53780 * 113.61404 * 272.49475 * 9 8 7 12 12 C 1.53777 * 87.08420 * 220.01928 * 11 9 8 13 13 H 1.09002 * 113.61044 * 139.98208 * 12 11 9 14 14 O 1.42900 * 113.69377 * 270.87692 * 12 11 9 15 15 C 1.42901 * 113.99723 * 247.53673 * 14 12 11 16 16 C 1.53780 * 87.07995 * 25.43560 * 12 11 9 17 17 C 1.39704 * 119.61653 * 179.97438 * 4 3 2 18 18 C 1.37785 * 119.90733 * 359.97438 * 17 4 3 19 19 C 1.50704 * 119.85000 * 180.02562 * 18 17 4 20 20 O 1.42901 * 109.47204 * 300.00485 * 19 18 17 21 21 Si 1.86302 * 109.47020 * 180.02562 * 19 18 17 22 22 C 1.38548 * 120.30377 * 359.97438 * 18 17 4 23 23 C 1.38064 * 120.38729 * 359.78713 * 22 18 17 24 24 H 1.09000 * 109.47187 * 300.00287 * 1 2 3 25 25 H 1.09001 * 109.46558 * 60.00334 * 1 2 3 26 26 H 1.09001 * 109.47103 * 179.97438 * 1 2 3 27 27 H 0.97004 * 120.00112 * 0.02562 * 7 5 4 28 28 H 1.09004 * 109.47136 * 300.00606 * 8 7 5 29 29 H 1.09005 * 109.46908 * 60.00036 * 8 7 5 30 30 H 1.09000 * 113.61860 * 334.57500 * 11 9 8 31 31 H 1.09005 * 113.61272 * 105.47267 * 11 9 8 32 32 H 1.08995 * 109.47397 * 60.00054 * 15 14 12 33 33 H 1.09000 * 109.47143 * 180.02562 * 15 14 12 34 34 H 1.08995 * 109.46999 * 299.99596 * 15 14 12 35 35 H 1.08996 * 113.61477 * 220.02080 * 16 12 11 36 36 H 1.08999 * 113.69304 * 89.12381 * 16 12 11 37 37 H 1.08000 * 120.04699 * 179.97438 * 17 4 3 38 38 H 1.08998 * 109.46730 * 60.00950 * 19 18 17 39 39 H 0.96706 * 113.99648 * 179.97438 * 20 19 18 40 40 H 1.48508 * 109.99995 * 60.00489 * 21 19 18 41 41 H 1.48503 * 109.99728 * 181.31793 * 21 19 18 42 42 H 1.07999 * 119.80927 * 180.02562 * 22 18 17 43 43 H 1.07993 * 119.95785 * 180.25693 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4441 1.2857 0.0005 5 6 4.2550 0.0532 0.0022 6 8 3.7096 -1.0335 0.0027 7 7 5.6005 0.1318 0.0022 8 6 6.4058 -1.0921 0.0033 9 6 7.8911 -0.7253 0.0037 10 1 8.1280 0.0804 0.6986 11 6 8.4750 -0.5189 -1.4039 12 6 9.7329 -1.2485 -0.9036 13 1 10.1614 -1.9323 -1.6363 14 8 10.7059 -0.3805 -0.3189 15 6 11.9142 -0.2699 -1.0737 16 6 8.8257 -1.9403 0.1276 17 6 4.0668 2.5364 0.0000 18 6 3.3038 3.6836 -0.0016 19 6 3.9768 5.0321 -0.0028 20 8 4.7918 5.1587 1.1642 21 14 2.6825 6.3721 -0.0041 22 6 1.9206 3.6034 -0.0032 23 6 1.2924 2.3739 -0.0077 24 1 -0.3633 0.5139 0.8900 25 1 -0.3632 0.5138 -0.8901 26 1 -0.3633 -1.0277 -0.0005 27 1 6.0357 0.9987 0.0015 28 1 6.1761 -1.6773 0.8938 29 1 6.1762 -1.6788 -0.8862 30 1 7.9376 -1.0593 -2.1831 31 1 8.6483 0.5274 -1.6556 32 1 11.6886 0.1217 -2.0655 33 1 12.6007 0.4057 -0.5635 34 1 12.3753 -1.2531 -1.1675 35 1 9.2819 -2.0415 1.1123 36 1 8.3835 -2.8696 -0.2316 37 1 5.1447 2.6038 0.0008 38 1 4.5990 5.1267 -0.8927 39 1 5.2567 6.0042 1.2293 40 1 1.8277 6.2538 1.2046 41 1 3.3331 7.7066 -0.0373 42 1 1.3303 4.5078 -0.0049 43 1 0.2139 2.3194 -0.0131 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12896214_12496546.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:22:39 Heat of formation + Delta-G solvation = -84.642722 kcal Electronic energy + Delta-G solvation = -25403.655159 eV Core-core repulsion = 21610.427961 eV Total energy + Delta-G solvation = -3793.227199 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.65032 -40.75963 -39.66494 -39.08639 -37.34639 -37.22451 -35.04301 -32.73256 -31.91740 -29.23248 -28.44410 -27.41026 -26.70085 -26.13719 -25.05265 -23.57494 -22.26617 -21.35186 -20.42277 -19.40264 -18.61845 -18.12737 -17.69338 -17.32012 -16.78658 -16.59380 -16.55596 -16.30500 -16.10252 -15.86941 -15.76712 -15.68274 -15.00738 -14.65679 -14.50976 -14.21142 -14.06996 -13.84815 -13.80077 -13.43935 -13.39969 -13.00127 -12.86359 -12.54084 -12.49593 -12.34622 -12.00255 -11.85088 -11.75385 -11.65566 -11.21404 -10.71572 -10.51600 -10.46019 -10.15207 -9.86640 -9.19522 -5.03356 -0.16830 0.26519 1.21329 1.53259 1.89660 1.95765 2.26021 2.29228 2.65374 2.78431 3.24960 3.51128 3.56653 3.62765 3.65795 3.74744 3.80717 3.84437 4.05275 4.15972 4.22658 4.24076 4.25498 4.29513 4.34051 4.42280 4.44898 4.50230 4.62437 4.66731 4.69783 4.71612 4.76723 4.80441 4.87305 4.95558 5.03945 5.13301 5.17325 5.30051 5.33174 5.55264 5.60788 6.22347 6.34531 6.38250 6.65832 7.44446 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.192 3.808 4 C -0.174 4.174 5 C 0.560 3.440 6 O -0.518 6.518 7 N -0.729 5.729 8 C 0.130 3.870 9 C -0.117 4.117 10 H 0.100 0.900 11 C -0.155 4.155 12 C 0.061 3.939 13 H 0.076 0.924 14 O -0.370 6.370 15 C 0.030 3.970 16 C -0.131 4.131 17 C -0.018 4.018 18 C -0.122 4.122 19 C -0.070 4.070 20 O -0.536 6.536 21 Si 0.678 3.322 22 C -0.045 4.045 23 C -0.213 4.213 24 H 0.058 0.942 25 H 0.059 0.941 26 H 0.105 0.895 27 H 0.399 0.601 28 H 0.070 0.930 29 H 0.070 0.930 30 H 0.092 0.908 31 H 0.075 0.925 32 H 0.043 0.957 33 H 0.087 0.913 34 H 0.043 0.957 35 H 0.080 0.920 36 H 0.097 0.903 37 H 0.134 0.866 38 H 0.078 0.922 39 H 0.380 0.620 40 H -0.254 1.254 41 H -0.260 1.260 42 H 0.134 0.866 43 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.550 3.275 -3.824 5.064 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.143 3.857 4 C -0.178 4.178 5 C 0.348 3.652 6 O -0.394 6.394 7 N -0.383 5.383 8 C 0.007 3.993 9 C -0.136 4.136 10 H 0.119 0.881 11 C -0.192 4.192 12 C 0.003 3.997 13 H 0.094 0.906 14 O -0.288 6.288 15 C -0.066 4.066 16 C -0.169 4.169 17 C -0.037 4.037 18 C -0.123 4.123 19 C -0.180 4.180 20 O -0.344 6.344 21 Si 0.579 3.421 22 C -0.063 4.063 23 C -0.232 4.232 24 H 0.076 0.924 25 H 0.077 0.923 26 H 0.123 0.877 27 H 0.234 0.766 28 H 0.088 0.912 29 H 0.088 0.912 30 H 0.111 0.889 31 H 0.093 0.907 32 H 0.061 0.939 33 H 0.106 0.894 34 H 0.062 0.938 35 H 0.099 0.901 36 H 0.115 0.885 37 H 0.152 0.848 38 H 0.096 0.904 39 H 0.229 0.771 40 H -0.179 1.179 41 H -0.185 1.185 42 H 0.152 0.848 43 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -0.356 2.436 -3.122 3.976 hybrid contribution 1.130 0.884 0.371 1.481 sum 0.774 3.320 -2.752 4.381 Atomic orbital electron populations 1.23233 0.78263 1.04703 1.01445 1.86384 1.21139 1.25183 1.86240 1.19078 0.90928 0.85041 0.90655 1.19327 0.90918 0.93874 1.13681 1.17938 0.81859 0.88637 0.76794 1.90840 1.71564 1.28590 1.48372 1.45891 1.05886 1.09972 1.76506 1.21390 0.88677 0.86649 1.02565 1.22751 0.92798 0.99716 0.98344 0.88133 1.23578 0.96834 1.02061 0.96758 1.23049 0.88760 0.92129 0.95806 0.90620 1.87878 1.26036 1.66320 1.48599 1.22836 0.86367 1.01221 0.96188 1.23184 0.95802 0.97266 1.00652 1.20938 0.99826 0.89876 0.93071 1.19017 0.93035 0.93714 1.06492 1.24705 1.01258 1.01769 0.90236 1.86591 1.63382 1.41110 1.43308 0.95175 0.81616 0.76393 0.88878 1.20917 0.93486 0.97386 0.94523 1.21196 1.00724 0.91429 1.09851 0.92362 0.92254 0.87713 0.76626 0.91176 0.91152 0.88935 0.90669 0.93874 0.89409 0.93797 0.90080 0.88457 0.84827 0.90449 0.77149 1.17870 1.18498 0.84846 0.84048 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.99 16 2 O -0.28 -1.20 8.57 -40.54 -0.35 -1.55 16 3 C 0.19 0.64 6.70 -38.70 -0.26 0.38 16 4 C -0.17 -0.59 5.89 -104.84 -0.62 -1.21 16 5 C 0.56 2.66 7.76 -12.47 -0.10 2.57 16 6 O -0.52 -4.37 15.16 -16.59 -0.25 -4.63 16 7 N -0.73 -1.17 5.51 -61.35 -0.34 -1.51 16 8 C 0.13 0.14 5.51 -4.04 -0.02 0.11 16 9 C -0.12 0.05 3.69 -89.81 -0.33 -0.28 16 10 H 0.10 0.01 8.14 -51.93 -0.42 -0.42 16 11 C -0.15 0.12 7.46 -25.92 -0.19 -0.07 16 12 C 0.06 -0.01 4.37 -25.92 -0.11 -0.12 16 13 H 0.08 -0.09 7.87 -51.93 -0.41 -0.50 16 14 O -0.37 -0.58 10.64 -35.23 -0.37 -0.95 16 15 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 16 C -0.13 0.07 7.47 -25.92 -0.19 -0.12 16 17 C -0.02 -0.02 9.08 -39.20 -0.36 -0.38 16 18 C -0.12 -0.08 5.42 -104.67 -0.57 -0.65 16 19 C -0.07 0.06 2.81 36.01 0.10 0.17 16 20 O -0.54 -0.15 12.74 -35.23 -0.45 -0.60 16 21 Si 0.68 -1.07 29.77 -169.99 -5.06 -6.14 16 22 C -0.05 0.00 8.66 -39.53 -0.34 -0.34 16 23 C -0.21 -0.14 9.03 -39.47 -0.36 -0.50 16 24 H 0.06 -0.09 7.68 -51.93 -0.40 -0.49 16 25 H 0.06 -0.12 7.65 -51.93 -0.40 -0.51 16 26 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.40 -0.24 6.50 -40.82 -0.27 -0.51 16 28 H 0.07 0.15 8.14 -51.93 -0.42 -0.28 16 29 H 0.07 0.11 7.85 -51.93 -0.41 -0.30 16 30 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 31 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 33 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 34 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 35 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 36 H 0.10 -0.15 8.10 -51.93 -0.42 -0.57 16 37 H 0.13 -0.09 6.40 -52.49 -0.34 -0.43 16 38 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 39 H 0.38 -1.35 8.74 45.56 0.40 -0.95 16 40 H -0.25 -0.41 7.11 56.52 0.40 0.00 16 41 H -0.26 -0.14 7.11 56.52 0.40 0.27 16 42 H 0.13 -0.30 4.85 -52.49 -0.25 -0.55 16 43 H 0.14 -0.26 6.30 -52.49 -0.33 -0.59 16 LS Contribution 354.04 15.07 5.34 5.34 Total: 0.00 -9.42 354.04 -8.97 -18.39 By element: Atomic # 1 Polarization: -3.73 SS G_CDS: -6.22 Total: -9.96 kcal Atomic # 6 Polarization: 2.86 SS G_CDS: -1.26 Total: 1.60 kcal Atomic # 7 Polarization: -1.17 SS G_CDS: -0.34 Total: -1.51 kcal Atomic # 8 Polarization: -6.30 SS G_CDS: -1.42 Total: -7.73 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.06 Total: -6.14 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -9.42 -8.97 -18.39 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12896214_12496546.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.257 kcal (2) G-P(sol) polarization free energy of solvation -9.416 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.673 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.970 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.386 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.643 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds