Wall clock time and date at job start Sat Mar 6 2021 22:22:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35655 * 116.99688 * 2 1 4 4 C 1.40142 * 120.14682 * 179.97438 * 3 2 1 5 5 C 1.47537 * 120.19039 * 359.95009 * 4 3 2 6 6 O 1.21586 * 120.00480 * 0.02562 * 5 4 3 7 7 N 1.34777 * 119.99803 * 179.97438 * 5 4 3 8 8 C 1.46499 * 120.00197 * 180.02562 * 7 5 4 9 9 C 1.52998 * 109.47249 * 180.02562 * 8 7 5 10 10 H 1.08994 * 112.85244 * 43.80492 * 9 8 7 11 11 C 1.53780 * 113.61404 * 272.49475 * 9 8 7 12 12 C 1.53777 * 87.08420 * 220.01928 * 11 9 8 13 13 H 1.09002 * 113.61044 * 139.98208 * 12 11 9 14 14 O 1.42900 * 113.69377 * 270.87692 * 12 11 9 15 15 C 1.42901 * 113.99723 * 247.53673 * 14 12 11 16 16 C 1.53780 * 87.07995 * 25.43560 * 12 11 9 17 17 C 1.39704 * 119.61653 * 179.97438 * 4 3 2 18 18 C 1.37785 * 119.90733 * 359.97438 * 17 4 3 19 19 C 1.50704 * 119.85000 * 180.02562 * 18 17 4 20 20 O 1.42901 * 109.47204 * 300.00485 * 19 18 17 21 21 Si 1.86302 * 109.47020 * 180.02562 * 19 18 17 22 22 C 1.38548 * 120.30377 * 359.97438 * 18 17 4 23 23 C 1.38064 * 120.38729 * 359.78713 * 22 18 17 24 24 H 1.09000 * 109.47187 * 300.00287 * 1 2 3 25 25 H 1.09001 * 109.46558 * 60.00334 * 1 2 3 26 26 H 1.09001 * 109.47103 * 179.97438 * 1 2 3 27 27 H 0.97004 * 120.00112 * 0.02562 * 7 5 4 28 28 H 1.09004 * 109.47136 * 300.00606 * 8 7 5 29 29 H 1.09005 * 109.46908 * 60.00036 * 8 7 5 30 30 H 1.09000 * 113.61860 * 334.57500 * 11 9 8 31 31 H 1.09005 * 113.61272 * 105.47267 * 11 9 8 32 32 H 1.08995 * 109.47397 * 60.00054 * 15 14 12 33 33 H 1.09000 * 109.47143 * 180.02562 * 15 14 12 34 34 H 1.08995 * 109.46999 * 299.99596 * 15 14 12 35 35 H 1.08996 * 113.61477 * 220.02080 * 16 12 11 36 36 H 1.08999 * 113.69304 * 89.12381 * 16 12 11 37 37 H 1.08000 * 120.04699 * 179.97438 * 17 4 3 38 38 H 1.08998 * 109.46730 * 60.00950 * 19 18 17 39 39 H 0.96706 * 113.99648 * 179.97438 * 20 19 18 40 40 H 1.48508 * 109.99995 * 60.00489 * 21 19 18 41 41 H 1.48503 * 109.99728 * 181.31793 * 21 19 18 42 42 H 1.07999 * 119.80927 * 180.02562 * 22 18 17 43 43 H 1.07993 * 119.95785 * 180.25693 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4441 1.2857 0.0005 5 6 4.2550 0.0532 0.0022 6 8 3.7096 -1.0335 0.0027 7 7 5.6005 0.1318 0.0022 8 6 6.4058 -1.0921 0.0033 9 6 7.8911 -0.7253 0.0037 10 1 8.1280 0.0804 0.6986 11 6 8.4750 -0.5189 -1.4039 12 6 9.7329 -1.2485 -0.9036 13 1 10.1614 -1.9323 -1.6363 14 8 10.7059 -0.3805 -0.3189 15 6 11.9142 -0.2699 -1.0737 16 6 8.8257 -1.9403 0.1276 17 6 4.0668 2.5364 0.0000 18 6 3.3038 3.6836 -0.0016 19 6 3.9768 5.0321 -0.0028 20 8 4.7918 5.1587 1.1642 21 14 2.6825 6.3721 -0.0041 22 6 1.9206 3.6034 -0.0032 23 6 1.2924 2.3739 -0.0077 24 1 -0.3633 0.5139 0.8900 25 1 -0.3632 0.5138 -0.8901 26 1 -0.3633 -1.0277 -0.0005 27 1 6.0357 0.9987 0.0015 28 1 6.1761 -1.6773 0.8938 29 1 6.1762 -1.6788 -0.8862 30 1 7.9376 -1.0593 -2.1831 31 1 8.6483 0.5274 -1.6556 32 1 11.6886 0.1217 -2.0655 33 1 12.6007 0.4057 -0.5635 34 1 12.3753 -1.2531 -1.1675 35 1 9.2819 -2.0415 1.1123 36 1 8.3835 -2.8696 -0.2316 37 1 5.1447 2.6038 0.0008 38 1 4.5990 5.1267 -0.8927 39 1 5.2567 6.0042 1.2293 40 1 1.8277 6.2538 1.2046 41 1 3.3331 7.7066 -0.0373 42 1 1.3303 4.5078 -0.0049 43 1 0.2139 2.3194 -0.0131 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12896214_12496546.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:22:38 Heat of formation + Delta-G solvation = -85.470972 kcal Electronic energy + Delta-G solvation = -25403.691075 eV Core-core repulsion = 21610.427961 eV Total energy + Delta-G solvation = -3793.263114 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -41.77866 -40.78285 -39.87447 -39.12559 -37.34707 -37.27891 -35.26716 -32.81667 -31.94679 -29.29658 -28.43190 -27.36817 -26.66407 -26.11439 -25.14945 -23.61520 -22.32989 -21.52508 -20.44179 -19.48483 -18.56827 -18.21216 -17.79742 -17.32220 -16.90218 -16.69925 -16.57382 -16.37534 -16.12821 -15.93984 -15.81605 -15.68652 -15.08500 -14.70941 -14.58333 -14.29282 -14.05719 -13.88703 -13.82675 -13.45971 -13.37053 -12.99531 -12.86421 -12.52308 -12.48812 -12.37857 -12.02522 -11.86771 -11.76430 -11.64814 -11.23377 -10.92041 -10.48658 -10.46336 -10.30487 -10.03349 -9.27649 -4.90720 -0.27411 0.21137 1.31984 1.62492 1.75982 1.97899 2.09901 2.26840 2.65151 2.71386 3.35323 3.48419 3.56711 3.62165 3.67394 3.76569 3.82464 3.86016 4.04615 4.15812 4.25202 4.29694 4.33818 4.35360 4.36961 4.52788 4.54214 4.54743 4.62975 4.66751 4.71762 4.76452 4.77363 4.84346 4.87314 4.92152 5.05568 5.09394 5.17148 5.26663 5.29239 5.45418 5.55059 6.27363 6.29583 6.49418 6.62097 7.18766 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.313 6.313 3 C 0.170 3.830 4 C -0.198 4.198 5 C 0.555 3.445 6 O -0.565 6.565 7 N -0.716 5.716 8 C 0.133 3.867 9 C -0.110 4.110 10 H 0.097 0.903 11 C -0.148 4.148 12 C 0.057 3.943 13 H 0.087 0.913 14 O -0.393 6.393 15 C 0.025 3.975 16 C -0.131 4.131 17 C -0.018 4.018 18 C -0.130 4.130 19 C -0.078 4.078 20 O -0.558 6.558 21 Si 0.759 3.241 22 C -0.044 4.044 23 C -0.211 4.211 24 H 0.070 0.930 25 H 0.077 0.923 26 H 0.108 0.892 27 H 0.410 0.590 28 H 0.057 0.943 29 H 0.066 0.934 30 H 0.099 0.901 31 H 0.075 0.925 32 H 0.050 0.950 33 H 0.093 0.907 34 H 0.050 0.950 35 H 0.073 0.927 36 H 0.107 0.893 37 H 0.148 0.852 38 H 0.101 0.899 39 H 0.396 0.604 40 H -0.297 1.297 41 H -0.287 1.287 42 H 0.157 0.843 43 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.677 4.581 -4.578 6.512 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.224 6.224 3 C 0.122 3.878 4 C -0.202 4.202 5 C 0.344 3.656 6 O -0.445 6.445 7 N -0.369 5.369 8 C 0.010 3.990 9 C -0.128 4.128 10 H 0.115 0.885 11 C -0.186 4.186 12 C -0.001 4.001 13 H 0.105 0.895 14 O -0.312 6.312 15 C -0.071 4.071 16 C -0.169 4.169 17 C -0.037 4.037 18 C -0.130 4.130 19 C -0.187 4.187 20 O -0.368 6.368 21 Si 0.665 3.335 22 C -0.062 4.062 23 C -0.229 4.229 24 H 0.089 0.911 25 H 0.095 0.905 26 H 0.126 0.874 27 H 0.247 0.753 28 H 0.075 0.925 29 H 0.084 0.916 30 H 0.118 0.882 31 H 0.093 0.907 32 H 0.069 0.931 33 H 0.111 0.889 34 H 0.068 0.932 35 H 0.092 0.908 36 H 0.126 0.874 37 H 0.166 0.834 38 H 0.119 0.881 39 H 0.246 0.754 40 H -0.225 1.225 41 H -0.214 1.214 42 H 0.174 0.826 43 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -0.184 3.767 -3.895 5.422 hybrid contribution 1.102 0.535 0.648 1.386 sum 0.918 4.302 -3.246 5.467 Atomic orbital electron populations 1.23463 0.76479 1.05523 1.02898 1.86337 1.23258 1.26258 1.86576 1.19390 0.91275 0.85603 0.91539 1.19419 0.91284 0.93959 1.15499 1.18295 0.82640 0.88628 0.76084 1.90800 1.72532 1.30241 1.50933 1.45833 1.05154 1.10798 1.75144 1.21380 0.89511 0.86364 1.01727 1.22660 0.91525 0.99811 0.98834 0.88484 1.23547 0.96462 1.02141 0.96423 1.23141 0.88762 0.92243 0.96000 0.89490 1.87842 1.26948 1.66779 1.49627 1.22961 0.85810 1.01846 0.96437 1.23223 0.95656 0.97609 1.00409 1.21087 1.00651 0.89304 0.92627 1.19316 0.93506 0.94291 1.05929 1.24905 1.01958 1.00928 0.90874 1.86547 1.63809 1.42576 1.43879 0.94294 0.79033 0.73938 0.86275 1.21237 0.93616 0.98021 0.93324 1.21458 1.01848 0.90701 1.08899 0.91107 0.90483 0.87361 0.75282 0.92486 0.91565 0.88233 0.90662 0.93142 0.88889 0.93156 0.90784 0.87423 0.83403 0.88077 0.75364 1.22491 1.21437 0.82628 0.81703 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.00 9.81 113.37 1.11 1.11 16 2 O -0.31 -3.22 8.57 -68.78 -0.59 -3.81 16 3 C 0.17 1.31 6.70 22.84 0.15 1.46 16 4 C -0.20 -1.58 5.89 -20.01 -0.12 -1.70 16 5 C 0.55 6.36 7.76 86.70 0.67 7.03 16 6 O -0.57 -11.14 15.16 16.93 0.26 -10.88 16 7 N -0.72 -3.17 5.51 -466.27 -2.57 -5.74 16 8 C 0.13 0.45 5.51 86.38 0.48 0.93 16 9 C -0.11 0.03 3.69 -10.27 -0.04 0.00 16 10 H 0.10 0.06 8.14 -2.39 -0.02 0.04 16 11 C -0.15 0.26 7.46 31.12 0.23 0.49 16 12 C 0.06 -0.03 4.37 31.12 0.14 0.11 16 13 H 0.09 -0.26 7.87 -2.39 -0.02 -0.27 16 14 O -0.39 -1.23 10.64 -148.98 -1.58 -2.81 16 15 C 0.03 -0.05 10.85 113.37 1.23 1.18 16 16 C -0.13 0.10 7.47 31.12 0.23 0.33 16 17 C -0.02 -0.05 9.08 22.52 0.20 0.16 16 18 C -0.13 -0.08 5.42 -19.90 -0.11 -0.19 16 19 C -0.08 0.25 2.81 71.24 0.20 0.45 16 20 O -0.56 0.25 12.74 -148.98 -1.90 -1.65 16 21 Si 0.76 -3.28 29.77 68.60 2.04 -1.24 16 22 C -0.04 0.04 8.66 22.30 0.19 0.23 16 23 C -0.21 -0.21 9.03 22.34 0.20 -0.01 16 24 H 0.07 -0.22 7.68 -2.39 -0.02 -0.24 16 25 H 0.08 -0.32 7.65 -2.39 -0.02 -0.34 16 26 H 0.11 -0.16 8.14 -2.39 -0.02 -0.18 16 27 H 0.41 -0.28 6.50 -92.70 -0.60 -0.88 16 28 H 0.06 0.35 8.14 -2.39 -0.02 0.33 16 29 H 0.07 0.30 7.85 -2.38 -0.02 0.28 16 30 H 0.10 -0.30 7.90 -2.39 -0.02 -0.32 16 31 H 0.07 -0.11 8.14 -2.38 -0.02 -0.13 16 32 H 0.05 -0.18 8.14 -2.39 -0.02 -0.20 16 33 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 34 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 35 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 36 H 0.11 -0.32 8.10 -2.39 -0.02 -0.34 16 37 H 0.15 -0.24 6.40 -2.91 -0.02 -0.26 16 38 H 0.10 -0.79 7.96 -2.39 -0.02 -0.81 16 39 H 0.40 -3.22 8.74 -74.05 -0.65 -3.87 16 40 H -0.30 -0.88 7.11 99.48 0.71 -0.18 16 41 H -0.29 -0.07 7.11 99.48 0.71 0.64 16 42 H 0.16 -0.94 4.85 -2.91 -0.01 -0.96 16 43 H 0.17 -0.79 6.30 -2.91 -0.02 -0.81 16 Total: 0.00 -23.77 354.04 0.27 -23.50 By element: Atomic # 1 Polarization: -8.79 SS G_CDS: -0.17 Total: -8.96 kcal Atomic # 6 Polarization: 6.81 SS G_CDS: 4.78 Total: 11.59 kcal Atomic # 7 Polarization: -3.17 SS G_CDS: -2.57 Total: -5.74 kcal Atomic # 8 Polarization: -15.34 SS G_CDS: -3.81 Total: -19.15 kcal Atomic # 14 Polarization: -3.28 SS G_CDS: 2.04 Total: -1.24 kcal Total: -23.77 0.27 -23.50 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12896214_12496546.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.971 kcal (2) G-P(sol) polarization free energy of solvation -23.767 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.738 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.267 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.500 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.471 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds