Wall clock time and date at job start Sat Mar 6 2021 22:23:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42903 * 113.99872 * 2 1 4 4 H 1.09003 * 112.84784 * 341.18871 * 3 2 1 5 5 C 1.53946 * 113.61311 * 112.46451 * 3 2 1 6 6 C 1.53780 * 87.02481 * 89.19758 * 5 3 2 7 7 H 1.08993 * 113.61328 * 270.77321 * 6 5 3 8 8 C 1.52997 * 113.61704 * 139.94955 * 6 5 3 9 9 N 1.46497 * 109.47219 * 85.86469 * 8 6 5 10 10 C 1.34780 * 119.99913 * 179.97438 * 9 8 6 11 11 O 1.21647 * 119.99803 * 0.02562 * 10 9 8 12 12 C 1.47057 * 119.99789 * 179.97438 * 10 9 8 13 13 C 1.35864 * 125.42390 * 180.02562 * 12 10 9 14 14 C 1.41601 * 107.72740 * 179.97438 * 13 12 10 15 15 C 1.40057 * 133.38065 * 180.02562 * 14 13 12 16 16 C 1.36471 * 119.83144 * 179.97438 * 15 14 13 17 17 C 1.38902 * 120.61433 * 359.82954 * 16 15 14 18 18 C 1.50694 * 119.67748 * 180.25099 * 17 16 15 19 19 O 1.42899 * 109.47571 * 120.15155 * 18 17 16 20 20 Si 1.86302 * 109.47232 * 0.14978 * 18 17 16 21 21 C 1.37712 * 120.64825 * 0.40474 * 17 16 15 22 22 C 1.39189 * 119.80618 * 359.54378 * 21 17 16 23 23 N 1.37491 * 133.18705 * 180.23981 * 22 21 17 24 24 C 1.53786 * 113.61156 * 209.99665 * 3 2 1 25 25 H 1.09005 * 109.46859 * 179.97438 * 1 2 3 26 26 H 1.08995 * 109.47388 * 300.00353 * 1 2 3 27 27 H 1.09006 * 109.46880 * 60.00820 * 1 2 3 28 28 H 1.09000 * 113.67120 * 334.66876 * 5 3 2 29 29 H 1.09002 * 113.61376 * 203.71759 * 5 3 2 30 30 H 1.09000 * 109.47254 * 325.86284 * 8 6 5 31 31 H 1.08999 * 109.47153 * 205.86668 * 8 6 5 32 32 H 0.96999 * 119.99855 * 359.97438 * 9 8 6 33 33 H 1.07994 * 126.14017 * 359.95214 * 13 12 10 34 34 H 1.07999 * 120.08712 * 359.95877 * 15 14 13 35 35 H 1.08002 * 119.70006 * 180.02562 * 16 15 14 36 36 H 1.09010 * 109.47026 * 240.15043 * 18 17 16 37 37 H 0.96698 * 113.99432 * 300.00444 * 19 18 17 38 38 H 1.48492 * 109.99973 * 58.68273 * 20 18 17 39 39 H 1.48499 * 110.00175 * 180.02562 * 20 18 17 40 40 H 1.08002 * 120.09919 * 179.82630 * 21 17 16 41 41 H 0.97000 * 125.60340 * 0.05218 * 23 22 21 42 42 H 1.08993 * 113.61151 * 156.25206 * 24 3 2 43 43 H 1.09000 * 113.61399 * 25.34556 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 -0.3239 5 6 2.7534 1.6496 1.3035 6 6 4.0063 1.0353 0.6571 7 1 4.1106 -0.0346 0.8374 8 6 5.2905 1.8147 0.9472 9 7 5.8564 1.3664 2.2219 10 6 6.9968 1.9168 2.6836 11 8 7.5558 2.7862 2.0421 12 6 7.5646 1.4672 3.9635 13 6 8.7032 1.9443 4.5308 14 6 8.8993 1.2531 5.7510 15 6 9.8829 1.3180 6.7460 16 6 9.7992 0.5030 7.8374 17 6 8.7443 -0.3902 7.9741 18 6 8.6697 -1.2763 9.1907 19 8 7.4552 -1.0149 9.8968 20 14 10.1225 -0.9269 10.3034 21 6 7.7674 -0.4761 7.0072 22 6 7.8302 0.3455 5.8854 23 7 7.0250 0.4928 4.7807 24 6 3.3756 1.3719 -0.7045 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5137 -0.8901 28 1 2.3940 1.0965 2.1713 29 1 2.8380 2.7205 1.4883 30 1 5.0642 2.8794 1.0045 31 1 6.0106 1.6389 0.1481 32 1 5.4105 0.6735 2.7336 33 1 9.3441 2.7124 4.1239 34 1 10.7055 2.0111 6.6497 35 1 10.5586 0.5551 8.6036 36 1 8.6923 -2.3213 8.8810 37 1 7.3670 -0.1019 10.2029 38 1 10.1210 0.5021 10.7069 39 1 10.0609 -1.7949 11.5067 40 1 6.9526 -1.1757 7.1211 41 1 6.2116 -0.0054 4.6043 42 1 3.6305 2.3666 -1.0697 43 1 3.5177 0.5948 -1.4555 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12896214_13158378.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:23:03 Heat of formation + Delta-G solvation = -21.407418 kcal Electronic energy + Delta-G solvation = -25318.936573 eV Core-core repulsion = 21525.255463 eV Total energy + Delta-G solvation = -3793.681110 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.67721 -41.03492 -40.20037 -38.98880 -37.42186 -36.97034 -35.36532 -33.27284 -31.35206 -30.40052 -29.43381 -27.60376 -26.90202 -26.58655 -24.57258 -23.55400 -22.94707 -21.97458 -21.32492 -20.58744 -19.54646 -18.49465 -17.84233 -17.68330 -17.02260 -16.84315 -16.73682 -16.50939 -16.29262 -16.13189 -15.70947 -15.56909 -15.41777 -14.94932 -14.80671 -14.65415 -14.47439 -14.39921 -13.99464 -13.90566 -13.56406 -13.13155 -13.03737 -12.66526 -12.57390 -12.51206 -12.05384 -12.00443 -11.83336 -11.56788 -11.40581 -11.15024 -10.94063 -10.61125 -10.60250 -10.25641 -9.31875 -8.81517 -4.92953 -0.32881 0.52723 1.01591 1.29398 1.63080 1.76958 1.94500 1.99967 2.28493 2.55275 2.77773 3.34466 3.37632 3.41896 3.57538 3.61533 3.67322 3.69674 3.71107 4.01879 4.10789 4.16437 4.24843 4.29932 4.34468 4.35545 4.44810 4.49735 4.52131 4.57208 4.60386 4.65844 4.66918 4.72282 4.89615 4.90416 4.97225 5.01769 5.09867 5.25342 5.35927 5.40902 5.52870 5.62042 5.97202 6.12289 6.19737 6.35596 6.39364 7.00741 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.370 6.370 3 C 0.061 3.939 4 H 0.077 0.923 5 C -0.156 4.156 6 C -0.119 4.119 7 H 0.101 0.899 8 C 0.128 3.872 9 N -0.727 5.727 10 C 0.583 3.417 11 O -0.518 6.518 12 C 0.014 3.986 13 C -0.101 4.101 14 C -0.116 4.116 15 C -0.051 4.051 16 C -0.146 4.146 17 C -0.087 4.087 18 C -0.075 4.075 19 O -0.531 6.531 20 Si 0.689 3.311 21 C -0.104 4.104 22 C 0.115 3.885 23 N -0.579 5.579 24 C -0.130 4.130 25 H 0.088 0.912 26 H 0.043 0.957 27 H 0.044 0.956 28 H 0.074 0.926 29 H 0.093 0.907 30 H 0.074 0.926 31 H 0.075 0.925 32 H 0.397 0.603 33 H 0.159 0.841 34 H 0.132 0.868 35 H 0.130 0.870 36 H 0.119 0.881 37 H 0.377 0.623 38 H -0.259 1.259 39 H -0.259 1.259 40 H 0.127 0.873 41 H 0.417 0.583 42 H 0.098 0.902 43 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.044 -1.091 -0.752 2.436 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.289 6.289 3 C 0.003 3.997 4 H 0.095 0.905 5 C -0.194 4.194 6 C -0.137 4.137 7 H 0.119 0.881 8 C 0.005 3.995 9 N -0.378 5.378 10 C 0.370 3.630 11 O -0.393 6.393 12 C -0.095 4.095 13 C -0.127 4.127 14 C -0.121 4.121 15 C -0.069 4.069 16 C -0.164 4.164 17 C -0.089 4.089 18 C -0.185 4.185 19 O -0.337 6.337 20 Si 0.591 3.409 21 C -0.125 4.125 22 C 0.005 3.995 23 N -0.183 5.183 24 C -0.168 4.168 25 H 0.107 0.893 26 H 0.061 0.939 27 H 0.063 0.937 28 H 0.093 0.907 29 H 0.111 0.889 30 H 0.092 0.908 31 H 0.093 0.907 32 H 0.230 0.770 33 H 0.176 0.824 34 H 0.150 0.850 35 H 0.147 0.853 36 H 0.137 0.863 37 H 0.224 0.776 38 H -0.184 1.184 39 H -0.184 1.184 40 H 0.145 0.855 41 H 0.255 0.745 42 H 0.116 0.884 43 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.520 -1.013 -0.686 1.952 hybrid contribution -1.964 0.215 0.339 2.004 sum -3.484 -0.798 -0.347 3.591 Atomic orbital electron populations 1.22850 0.80456 1.03112 1.00220 1.87874 1.20086 1.26353 1.94571 1.23081 0.94575 0.85484 0.96588 0.90501 1.23616 0.96127 1.01528 0.98081 1.22761 0.92698 1.00545 0.97710 0.88121 1.21489 0.94381 0.98870 0.84751 1.45880 1.25718 1.41999 1.24217 1.17197 0.80445 0.81861 0.83528 1.90884 1.60405 1.30588 1.57433 1.20108 0.98320 0.96905 0.94178 1.20979 0.96386 1.01337 0.94040 1.18231 0.97112 0.99786 0.96943 1.20375 0.97016 0.97794 0.91753 1.20476 0.98718 0.97978 0.99244 1.19974 0.95072 0.97652 0.96170 1.25052 0.96433 1.02099 0.94884 1.86594 1.38172 1.34250 1.74705 0.94829 0.84390 0.80767 0.80964 1.19863 1.00650 1.00248 0.91706 1.18311 0.92448 0.99112 0.89628 1.41902 1.24024 1.34490 1.17921 1.23181 0.93988 1.03235 0.96413 0.89336 0.93854 0.93714 0.90684 0.88902 0.90758 0.90691 0.76978 0.82377 0.84999 0.85299 0.86338 0.77579 1.18409 1.18376 0.85541 0.74487 0.88357 0.89930 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.05 16 2 O -0.37 -0.27 10.63 -35.23 -0.37 -0.64 16 3 C 0.06 -0.07 4.38 -25.83 -0.11 -0.18 16 4 H 0.08 -0.15 7.87 -51.93 -0.41 -0.56 16 5 C -0.16 0.31 7.48 -25.83 -0.19 0.11 16 6 C -0.12 0.23 3.68 -89.81 -0.33 -0.10 16 7 H 0.10 -0.16 8.14 -51.93 -0.42 -0.59 16 8 C 0.13 -0.12 5.50 -4.04 -0.02 -0.14 16 9 N -0.73 0.58 5.55 -61.50 -0.34 0.23 16 10 C 0.58 1.32 7.80 -12.68 -0.10 1.22 16 11 O -0.52 -3.07 16.84 5.24 0.09 -2.98 16 12 C 0.01 0.02 6.97 -82.29 -0.57 -0.55 16 13 C -0.10 -0.21 10.53 -39.15 -0.41 -0.63 16 14 C -0.12 -0.20 6.16 -106.93 -0.66 -0.86 16 15 C -0.05 -0.02 10.06 -39.54 -0.40 -0.41 16 16 C -0.15 0.05 8.59 -39.97 -0.34 -0.30 16 17 C -0.09 0.00 5.40 -104.57 -0.56 -0.57 16 18 C -0.07 0.04 2.81 36.00 0.10 0.14 16 19 O -0.53 -0.47 12.76 -35.23 -0.45 -0.92 16 20 Si 0.69 -0.78 29.75 -169.99 -5.06 -5.84 16 21 C -0.10 -0.05 9.61 -39.42 -0.38 -0.43 16 22 C 0.11 0.13 7.25 -83.97 -0.61 -0.48 16 23 N -0.58 0.24 6.07 -7.35 -0.04 0.20 16 24 C -0.13 0.23 7.48 -25.91 -0.19 0.04 16 25 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 26 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 27 H 0.04 -0.09 8.14 -51.93 -0.42 -0.52 16 28 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 29 H 0.09 -0.22 7.92 -51.93 -0.41 -0.63 16 30 H 0.07 -0.03 7.87 -51.93 -0.41 -0.43 16 31 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 32 H 0.40 -1.28 7.53 -40.82 -0.31 -1.59 16 33 H 0.16 0.23 8.06 -52.49 -0.42 -0.19 16 34 H 0.13 -0.21 8.06 -52.49 -0.42 -0.64 16 35 H 0.13 -0.28 4.82 -52.49 -0.25 -0.53 16 36 H 0.12 -0.15 7.96 -51.92 -0.41 -0.57 16 37 H 0.38 -0.66 8.70 45.56 0.40 -0.27 16 38 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 39 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 40 H 0.13 -0.05 8.06 -52.49 -0.42 -0.47 16 41 H 0.42 -1.41 8.12 -40.82 -0.33 -1.74 16 42 H 0.10 -0.28 8.10 -51.93 -0.42 -0.70 16 43 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 LS Contribution 360.41 15.07 5.43 5.43 Total: 0.00 -8.22 360.41 -10.42 -18.64 By element: Atomic # 1 Polarization: -6.06 SS G_CDS: -5.98 Total: -12.04 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -3.69 Total: -2.08 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: -0.39 Total: 0.43 kcal Atomic # 8 Polarization: -3.81 SS G_CDS: -0.74 Total: -4.54 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.06 Total: -5.84 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -8.22 -10.42 -18.64 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12896214_13158378.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.764 kcal (2) G-P(sol) polarization free energy of solvation -8.219 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.983 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.424 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.643 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.407 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds