Wall clock time and date at job start Sat Mar 6 2021 22:23:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42902 * 113.99814 * 2 1 4 4 H 1.08992 * 112.85190 * 341.19499 * 3 2 1 5 5 C 1.53783 * 113.68938 * 112.46903 * 3 2 1 6 6 C 1.53778 * 87.08499 * 89.12477 * 5 3 2 7 7 H 1.08995 * 113.69039 * 270.87690 * 6 5 3 8 8 C 1.52996 * 113.61370 * 139.97665 * 6 5 3 9 9 N 1.46505 * 109.46707 * 87.50526 * 8 6 5 10 10 C 1.34778 * 119.99974 * 179.97438 * 9 8 6 11 11 O 1.21290 * 119.99759 * 0.02562 * 10 9 8 12 12 C 1.50697 * 119.99984 * 180.02562 * 10 9 8 13 13 C 1.50706 * 109.46822 * 180.02562 * 12 10 9 14 14 C 1.38273 * 119.93364 * 90.00163 * 13 12 10 15 15 C 1.38123 * 120.06270 * 180.02562 * 14 13 12 16 16 C 1.38825 * 119.93706 * 359.97438 * 15 14 13 17 17 N 1.40199 * 120.06819 * 179.97438 * 16 15 14 18 18 C 1.36566 * 125.66827 * 310.15449 * 17 16 15 19 19 C 1.34855 * 108.20020 * 180.29869 * 18 17 16 20 20 C 1.40937 * 107.46688 * 359.73745 * 19 18 17 21 21 C 1.34851 * 107.47041 * 0.02562 * 20 19 18 22 22 C 1.50696 * 125.90145 * 179.97438 * 21 20 19 23 23 O 1.42903 * 109.47131 * 150.02340 * 22 21 20 24 24 Si 1.86305 * 109.47185 * 30.02881 * 22 21 20 25 25 C 1.38832 * 119.86729 * 0.25509 * 16 15 14 26 26 C 1.38122 * 119.93024 * 359.49119 * 25 16 15 27 27 C 1.53782 * 113.61223 * 209.99870 * 3 2 1 28 28 H 1.08997 * 109.46893 * 60.00438 * 1 2 3 29 29 H 1.09005 * 109.46752 * 179.97438 * 1 2 3 30 30 H 1.08992 * 109.47308 * 299.99725 * 1 2 3 31 31 H 1.09002 * 113.61421 * 334.57183 * 5 3 2 32 32 H 1.09001 * 113.61148 * 203.68057 * 5 3 2 33 33 H 1.08996 * 109.47538 * 327.50775 * 8 6 5 34 34 H 1.08998 * 109.47498 * 207.50070 * 8 6 5 35 35 H 0.96994 * 120.00305 * 0.02562 * 9 8 6 36 36 H 1.08991 * 109.47100 * 60.00558 * 12 10 9 37 37 H 1.09004 * 109.46901 * 299.99523 * 12 10 9 38 38 H 1.07995 * 119.97405 * 359.97438 * 14 13 12 39 39 H 1.08005 * 120.03489 * 179.97438 * 15 14 13 40 40 H 1.07998 * 125.90337 * 0.03519 * 18 17 16 41 41 H 1.07995 * 126.26632 * 179.73820 * 19 18 17 42 42 H 1.07994 * 126.26762 * 180.02562 * 20 19 18 43 43 H 1.08999 * 109.47358 * 270.02700 * 22 21 20 44 44 H 0.96700 * 114.00311 * 300.00591 * 23 22 21 45 45 H 1.48499 * 109.99670 * 58.67633 * 24 22 21 46 46 H 1.48497 * 110.00233 * 179.97438 * 24 22 21 47 47 H 1.07998 * 120.03339 * 179.72044 * 25 16 15 48 48 H 1.08007 * 119.96544 * 180.25120 * 26 25 16 49 49 H 1.09003 * 113.61239 * 156.24957 * 27 3 2 50 50 H 1.09000 * 113.61692 * 25.35316 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3138 2.0789 -0.3238 5 6 2.7532 1.6511 1.3013 6 6 4.0063 1.0353 0.6570 7 1 4.1106 -0.0346 0.8372 8 6 5.2905 1.8147 0.9470 9 7 5.8761 1.3408 2.2035 10 6 7.0200 1.8867 2.6620 11 8 7.5642 2.7705 2.0345 12 6 7.6226 1.3988 3.9541 13 6 8.8875 2.1667 4.2398 14 6 8.8334 3.3366 4.9750 15 6 9.9910 4.0427 5.2380 16 6 11.2097 3.5766 4.7639 17 7 12.3863 4.2915 5.0287 18 6 12.5680 5.6296 4.8250 19 6 13.8272 5.9442 5.1910 20 6 14.4447 4.7605 5.6426 21 6 13.5404 3.7659 5.5355 22 6 13.7664 2.3226 5.9054 23 8 12.5313 1.7397 6.3261 24 14 15.0044 2.2238 7.2940 25 6 11.2602 2.4042 4.0220 26 6 10.1000 1.6996 3.7667 27 6 3.3755 1.3719 -0.7045 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5137 0.8899 31 1 2.3927 1.0994 2.1696 32 1 2.8378 2.7222 1.4845 33 1 5.0598 2.8766 1.0314 34 1 6.0005 1.6606 0.1344 35 1 5.4411 0.6338 2.7051 36 1 7.8532 0.3369 3.8694 37 1 6.9130 1.5530 4.7670 38 1 7.8850 3.6990 5.3432 39 1 9.9481 4.9567 5.8119 40 1 11.8319 6.3164 4.4340 41 1 14.2796 6.9238 5.1463 42 1 15.4568 4.6671 6.0076 43 1 14.1475 1.7810 5.0396 44 1 12.1337 2.1723 7.0942 45 1 14.5108 2.9852 8.4696 46 1 15.2355 0.8056 7.6686 47 1 12.2063 2.0416 3.6480 48 1 10.1392 0.7854 3.1930 49 1 3.6304 2.3668 -1.0698 50 1 3.5176 0.5949 -1.4557 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12896214_13287746.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:23:32 Heat of formation + Delta-G solvation = 0.738593 kcal Electronic energy + Delta-G solvation = -30701.505614 eV Core-core repulsion = 26469.483449 eV Total energy + Delta-G solvation = -4232.022165 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -42.60238 -41.16989 -40.52273 -39.48303 -37.76521 -37.36129 -35.16783 -34.77829 -32.07685 -31.91378 -30.94509 -29.47251 -27.75955 -27.15542 -26.72650 -25.98508 -23.90156 -23.89447 -22.99503 -21.56322 -21.25135 -20.58602 -20.45289 -19.22326 -18.26814 -17.62620 -17.43310 -17.13368 -16.98742 -16.62934 -16.45218 -16.26108 -16.06701 -15.88917 -15.75226 -15.27115 -15.17450 -14.77821 -14.68800 -14.45010 -14.39957 -14.23753 -14.06155 -13.95519 -13.81390 -13.52236 -13.22208 -13.11838 -13.08487 -12.87318 -12.60414 -12.58407 -12.28410 -12.04004 -11.93301 -11.82287 -11.74844 -11.30946 -10.88799 -10.81037 -10.57097 -10.20667 -10.06242 -9.88004 -9.04895 -8.92169 -4.89418 0.08042 0.45133 1.12561 1.49488 1.68071 1.70162 1.90287 2.09167 2.15088 2.22175 2.58613 2.79959 3.28271 3.44814 3.49417 3.59894 3.65689 3.73331 3.75871 3.78445 3.95888 3.97227 4.13993 4.16498 4.22731 4.24713 4.33063 4.37081 4.39063 4.44323 4.52269 4.55281 4.58192 4.62147 4.65714 4.69225 4.70953 4.71491 4.77249 4.89629 4.95567 5.02762 5.08147 5.19642 5.27444 5.29710 5.35412 5.45049 5.47876 5.56889 5.84808 6.02973 6.15613 6.27641 6.41690 6.47421 6.61380 7.24875 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.370 6.370 3 C 0.061 3.939 4 H 0.076 0.924 5 C -0.155 4.155 6 C -0.117 4.117 7 H 0.101 0.899 8 C 0.128 3.872 9 N -0.731 5.731 10 C 0.513 3.487 11 O -0.529 6.529 12 C -0.103 4.103 13 C -0.063 4.063 14 C -0.092 4.092 15 C -0.120 4.120 16 C 0.124 3.876 17 N -0.391 5.391 18 C -0.006 4.006 19 C -0.190 4.190 20 C -0.184 4.184 21 C -0.016 4.016 22 C -0.050 4.050 23 O -0.526 6.526 24 Si 0.711 3.289 25 C -0.082 4.082 26 C -0.089 4.089 27 C -0.132 4.132 28 H 0.044 0.956 29 H 0.088 0.912 30 H 0.043 0.957 31 H 0.075 0.925 32 H 0.091 0.909 33 H 0.069 0.931 34 H 0.069 0.931 35 H 0.402 0.598 36 H 0.106 0.894 37 H 0.105 0.895 38 H 0.127 0.873 39 H 0.127 0.873 40 H 0.163 0.837 41 H 0.142 0.858 42 H 0.148 0.852 43 H 0.117 0.883 44 H 0.374 0.626 45 H -0.259 1.259 46 H -0.256 1.256 47 H 0.125 0.875 48 H 0.127 0.873 49 H 0.097 0.903 50 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.438 -1.173 0.693 3.698 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.289 6.289 3 C 0.002 3.998 4 H 0.094 0.906 5 C -0.192 4.192 6 C -0.135 4.135 7 H 0.119 0.881 8 C 0.005 3.995 9 N -0.384 5.384 10 C 0.298 3.702 11 O -0.405 6.405 12 C -0.143 4.143 13 C -0.063 4.063 14 C -0.111 4.111 15 C -0.139 4.139 16 C 0.034 3.966 17 N -0.064 5.064 18 C -0.134 4.134 19 C -0.214 4.214 20 C -0.209 4.209 21 C -0.125 4.125 22 C -0.160 4.160 23 O -0.332 6.332 24 Si 0.610 3.390 25 C -0.102 4.102 26 C -0.108 4.108 27 C -0.170 4.170 28 H 0.062 0.938 29 H 0.107 0.893 30 H 0.061 0.939 31 H 0.094 0.906 32 H 0.110 0.890 33 H 0.087 0.913 34 H 0.088 0.912 35 H 0.236 0.764 36 H 0.124 0.876 37 H 0.123 0.877 38 H 0.145 0.855 39 H 0.145 0.855 40 H 0.181 0.819 41 H 0.160 0.840 42 H 0.166 0.834 43 H 0.135 0.865 44 H 0.221 0.779 45 H -0.183 1.183 46 H -0.181 1.181 47 H 0.143 0.857 48 H 0.145 0.855 49 H 0.115 0.885 50 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -2.939 -1.505 0.482 3.337 hybrid contribution -1.692 0.097 0.441 1.751 sum -4.631 -1.408 0.923 4.928 Atomic orbital electron populations 1.22845 0.80500 1.03091 1.00192 1.87875 1.20046 1.26357 1.94580 1.23049 0.94550 0.85443 0.96733 0.90599 1.23575 0.96166 1.01436 0.98058 1.22746 0.92804 1.00579 0.97420 0.88088 1.21402 0.93935 0.98321 0.85869 1.46017 1.25848 1.41106 1.25424 1.20562 0.80401 0.82329 0.86865 1.90763 1.60924 1.30044 1.58760 1.20686 0.95936 1.01408 0.96295 1.19277 0.93612 0.95521 0.97930 1.20776 0.97784 0.94165 0.98383 1.20962 0.91225 1.00908 1.00827 1.17661 0.84829 0.94214 0.99847 1.41433 1.09130 1.07413 1.48390 1.22019 0.99499 0.83612 1.08221 1.20937 0.94181 0.99025 1.07245 1.20676 0.99453 0.92119 1.08635 1.20988 0.87459 0.96290 1.07765 1.24776 0.93921 0.88930 1.08371 1.86614 1.36045 1.59278 1.51215 0.94558 0.86168 0.81263 0.77044 1.20845 0.98919 0.93973 0.96428 1.20809 0.91286 0.99769 0.98910 1.23193 0.94085 1.03120 0.96581 0.93762 0.89345 0.93855 0.90626 0.89015 0.91279 0.91248 0.76426 0.87614 0.87671 0.85512 0.85510 0.81929 0.83978 0.83420 0.86527 0.77887 1.18340 1.18123 0.85713 0.85548 0.88499 0.90035 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.37 -0.36 10.64 -35.23 -0.37 -0.73 16 3 C 0.06 -0.05 4.37 -25.92 -0.11 -0.16 16 4 H 0.08 -0.13 7.87 -51.93 -0.41 -0.54 16 5 C -0.15 0.26 7.46 -25.92 -0.19 0.07 16 6 C -0.12 0.19 3.69 -89.81 -0.33 -0.15 16 7 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 8 C 0.13 -0.06 5.51 -4.04 -0.02 -0.08 16 9 N -0.73 0.77 5.56 -60.29 -0.33 0.43 16 10 C 0.51 0.67 7.82 -10.99 -0.09 0.59 16 11 O -0.53 -3.14 16.03 5.55 0.09 -3.05 16 12 C -0.10 0.13 5.83 -29.03 -0.17 -0.04 16 13 C -0.06 -0.08 4.37 -104.59 -0.46 -0.54 16 14 C -0.09 -0.13 9.69 -39.61 -0.38 -0.51 16 15 C -0.12 -0.24 9.66 -39.41 -0.38 -0.62 16 16 C 0.12 0.36 4.89 -83.59 -0.41 -0.05 16 17 N -0.39 -1.17 2.87 -56.73 -0.16 -1.34 16 18 C -0.01 -0.01 11.12 -16.64 -0.19 -0.20 16 19 C -0.19 -0.40 10.86 -39.76 -0.43 -0.83 16 20 C -0.18 -0.30 9.43 -39.76 -0.37 -0.68 16 21 C -0.02 -0.03 6.02 -81.68 -0.49 -0.53 16 22 C -0.05 -0.04 2.28 36.00 0.08 0.04 16 23 O -0.53 -0.91 9.89 -35.23 -0.35 -1.26 16 24 Si 0.71 -0.20 31.14 -169.99 -5.29 -5.49 16 25 C -0.08 -0.23 7.68 -39.40 -0.30 -0.53 16 26 C -0.09 -0.17 9.69 -39.61 -0.38 -0.56 16 27 C -0.13 0.17 7.47 -25.92 -0.19 -0.02 16 28 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 29 H 0.09 -0.18 8.14 -51.93 -0.42 -0.61 16 30 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 31 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 32 H 0.09 -0.19 7.90 -51.93 -0.41 -0.60 16 33 H 0.07 0.03 7.84 -51.93 -0.41 -0.38 16 34 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 35 H 0.40 -1.45 8.47 -40.82 -0.35 -1.80 16 36 H 0.11 -0.34 8.08 -51.93 -0.42 -0.76 16 37 H 0.11 -0.36 8.08 -51.93 -0.42 -0.78 16 38 H 0.13 -0.05 8.06 -52.49 -0.42 -0.48 16 39 H 0.13 0.12 8.06 -52.48 -0.42 -0.30 16 40 H 0.16 0.15 8.06 -52.49 -0.42 -0.27 16 41 H 0.14 0.05 8.06 -52.49 -0.42 -0.37 16 42 H 0.15 -0.14 6.89 -52.49 -0.36 -0.50 16 43 H 0.12 0.00 7.96 -51.93 -0.41 -0.42 16 44 H 0.37 0.09 8.70 45.56 0.40 0.49 16 45 H -0.26 -0.64 7.11 56.52 0.40 -0.24 16 46 H -0.26 -0.64 7.11 56.52 0.40 -0.24 16 47 H 0.12 0.33 7.67 -52.49 -0.40 -0.07 16 48 H 0.13 0.06 8.06 -52.48 -0.42 -0.36 16 49 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 50 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 LS Contribution 413.89 15.07 6.24 6.24 Total: 0.00 -8.95 413.89 -11.81 -20.76 By element: Atomic # 1 Polarization: -3.93 SS G_CDS: -7.88 Total: -11.81 kcal Atomic # 6 Polarization: 0.00 SS G_CDS: -3.73 Total: -3.74 kcal Atomic # 7 Polarization: -0.41 SS G_CDS: -0.50 Total: -0.91 kcal Atomic # 8 Polarization: -4.42 SS G_CDS: -0.63 Total: -5.05 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: -5.29 Total: -5.49 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -8.95 -11.81 -20.76 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12896214_13287746.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.495 kcal (2) G-P(sol) polarization free energy of solvation -8.951 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.544 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.805 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.757 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.739 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds