Wall clock time and date at job start Sat Mar 6 2021 22:24:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42908 * 113.99593 * 2 1 4 4 H 1.08999 * 112.85196 * 18.80485 * 3 2 1 5 5 C 1.53784 * 113.61299 * 150.00357 * 3 2 1 6 6 C 1.53778 * 87.08064 * 89.19433 * 5 3 2 7 7 H 1.08994 * 113.62208 * 270.80052 * 6 5 3 8 8 C 1.52999 * 113.60984 * 139.97964 * 6 5 3 9 9 N 1.46501 * 109.47356 * 175.00484 * 8 6 5 10 10 C 1.34771 * 120.00317 * 180.02562 * 9 8 6 11 11 O 1.21284 * 120.00280 * 359.97438 * 10 9 8 12 12 C 1.50697 * 120.00225 * 179.97438 * 10 9 8 13 13 C 1.53007 * 109.47487 * 179.97438 * 12 10 9 14 14 O 1.42901 * 109.47241 * 180.02562 * 13 12 10 15 15 C 1.35896 * 117.00049 * 180.02562 * 14 13 12 16 16 C 1.38707 * 120.05728 * 180.02562 * 15 14 13 17 17 C 1.38171 * 119.94458 * 180.02562 * 16 15 14 18 18 C 1.50696 * 119.97102 * 179.97438 * 17 16 15 19 19 O 1.42901 * 109.47498 * 300.02364 * 18 17 16 20 20 Si 1.86302 * 109.47091 * 180.02562 * 18 17 16 21 21 C 1.38241 * 120.05235 * 0.02562 * 17 16 15 22 22 C 1.38288 * 120.11556 * 359.95131 * 21 17 16 23 23 C 1.38119 * 120.05366 * 0.28328 * 22 21 17 24 24 C 1.53776 * 113.68777 * 247.53563 * 3 2 1 25 25 H 1.09003 * 109.47196 * 299.99563 * 1 2 3 26 26 H 1.08997 * 109.47631 * 60.00286 * 1 2 3 27 27 H 1.09005 * 109.47178 * 180.02562 * 1 2 3 28 28 H 1.09005 * 113.61005 * 334.65077 * 5 3 2 29 29 H 1.08996 * 113.61153 * 203.75145 * 5 3 2 30 30 H 1.08997 * 109.47315 * 55.00286 * 8 6 5 31 31 H 1.09008 * 109.47502 * 295.00147 * 8 6 5 32 32 H 0.97003 * 119.99670 * 359.97438 * 9 8 6 33 33 H 1.09006 * 109.47074 * 60.00278 * 12 10 9 34 34 H 1.09000 * 109.47545 * 300.00295 * 12 10 9 35 35 H 1.08997 * 109.46749 * 59.99873 * 13 12 10 36 36 H 1.09003 * 109.46719 * 300.00066 * 13 12 10 37 37 H 1.07997 * 120.02743 * 0.02562 * 16 15 14 38 38 H 1.09000 * 109.47091 * 60.02055 * 18 17 16 39 39 H 0.96702 * 114.00009 * 179.97438 * 19 18 17 40 40 H 1.48497 * 109.99762 * 60.00161 * 20 18 17 41 41 H 1.48499 * 110.00121 * 181.31873 * 20 18 17 42 42 H 1.08006 * 119.93966 * 179.97438 * 21 17 16 43 43 H 1.08002 * 119.96980 * 179.97438 * 22 21 17 44 44 H 1.07998 * 120.02956 * 179.72220 * 23 22 21 45 45 H 1.09000 * 113.61455 * 156.32643 * 24 3 2 46 46 H 1.09003 * 113.62090 * 25.42406 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3056 0.0000 4 1 1.3136 2.0790 0.3238 5 6 3.3755 1.3720 0.7045 6 6 4.0062 1.0353 -0.6570 7 1 4.1106 -0.0345 -0.8374 8 6 5.2904 1.8148 -0.9471 9 7 5.8760 1.3411 -2.2036 10 6 7.0197 1.8869 -2.6621 11 8 7.5641 2.7707 -2.0347 12 6 7.6224 1.3992 -3.9543 13 6 8.9066 2.1788 -4.2445 14 8 9.4777 1.7166 -5.4702 15 6 10.6314 2.3096 -5.8755 16 6 11.2401 1.9104 -7.0562 17 6 12.4134 2.5145 -7.4658 18 6 13.0755 2.0809 -8.7482 19 8 13.4107 0.6942 -8.6661 20 14 14.6254 3.0795 -9.0153 21 6 12.9808 3.5155 -6.6996 22 6 12.3756 3.9155 -5.5223 23 6 11.2054 3.3115 -5.1060 24 6 2.7530 1.6512 -1.3013 25 1 -0.3634 0.5138 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3634 -1.0277 0.0005 28 1 3.5176 0.5949 1.4556 29 1 3.6303 2.3669 1.0698 30 1 6.0003 1.6607 -0.1345 31 1 5.0597 2.8768 -1.0315 32 1 5.4408 0.6340 -2.7052 33 1 6.9127 1.5534 -4.7672 34 1 7.8529 0.3372 -3.8698 35 1 9.6164 2.0250 -3.4317 36 1 8.6757 3.2407 -4.3293 37 1 10.7974 1.1282 -7.6549 38 1 12.3920 2.2407 -9.5821 39 1 13.8410 0.3460 -9.4590 40 1 15.5655 2.8702 -7.8851 41 1 15.2708 2.6837 -10.2928 42 1 13.8981 3.9861 -7.0213 43 1 12.8212 4.6975 -4.9253 44 1 10.7355 3.6212 -4.1842 45 1 2.8377 2.7223 -1.4845 46 1 2.3926 1.0995 -2.1697 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12896214_4549614.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:24:36 Heat of formation + Delta-G solvation = -96.322041 kcal Electronic energy + Delta-G solvation = -25738.686897 eV Core-core repulsion = 21789.415627 eV Total energy + Delta-G solvation = -3949.271271 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.33050 -40.98940 -40.29607 -38.96853 -37.43639 -37.32063 -35.24352 -33.32668 -32.49637 -30.85525 -29.25151 -27.51602 -26.93511 -26.76714 -25.22694 -23.56242 -23.46973 -21.90721 -21.44718 -20.48405 -19.09027 -18.50224 -17.98988 -17.62250 -17.45970 -17.18922 -17.03345 -16.74257 -16.59861 -16.36158 -16.01118 -15.74073 -15.61315 -15.22787 -14.70777 -14.47159 -14.45942 -14.30487 -14.15630 -13.86583 -13.69634 -13.52429 -13.38392 -13.00921 -12.88901 -12.84402 -12.59991 -12.28561 -11.95106 -11.90403 -11.76184 -11.73894 -11.58579 -11.32627 -10.91352 -10.56978 -10.52457 -10.13023 -9.78143 -9.13065 -4.93073 0.32252 0.52664 1.29381 1.56907 1.62298 1.75223 1.98979 2.51436 2.58827 2.73719 3.36308 3.43571 3.47666 3.57582 3.65269 3.74769 3.80942 3.86952 3.92850 3.99243 4.15614 4.15871 4.22516 4.28589 4.33550 4.36020 4.37651 4.39669 4.51956 4.55801 4.60933 4.64389 4.67335 4.69179 4.70599 4.76112 4.77956 4.95007 5.07163 5.08335 5.17581 5.36927 5.39377 5.49005 5.57332 5.77976 6.15840 6.37470 6.45573 6.47529 7.12885 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.370 6.370 3 C 0.061 3.939 4 H 0.076 0.924 5 C -0.131 4.131 6 C -0.118 4.118 7 H 0.101 0.899 8 C 0.127 3.873 9 N -0.727 5.727 10 C 0.519 3.481 11 O -0.540 6.540 12 C -0.142 4.142 13 C 0.075 3.925 14 O -0.317 6.317 15 C 0.132 3.868 16 C -0.124 4.124 17 C -0.037 4.037 18 C -0.077 4.077 19 O -0.535 6.535 20 Si 0.686 3.314 21 C -0.153 4.153 22 C -0.073 4.073 23 C -0.203 4.203 24 C -0.155 4.155 25 H 0.044 0.956 26 H 0.043 0.957 27 H 0.088 0.912 28 H 0.081 0.919 29 H 0.097 0.903 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.404 0.596 33 H 0.107 0.893 34 H 0.107 0.893 35 H 0.072 0.928 36 H 0.073 0.927 37 H 0.132 0.868 38 H 0.079 0.921 39 H 0.380 0.620 40 H -0.255 1.255 41 H -0.261 1.261 42 H 0.129 0.871 43 H 0.132 0.868 44 H 0.133 0.867 45 H 0.092 0.908 46 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.432 1.272 -1.200 4.764 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.289 6.289 3 C 0.002 3.998 4 H 0.094 0.906 5 C -0.169 4.169 6 C -0.136 4.136 7 H 0.120 0.880 8 C 0.004 3.996 9 N -0.379 5.379 10 C 0.305 3.695 11 O -0.417 6.417 12 C -0.182 4.182 13 C -0.001 4.001 14 O -0.230 6.230 15 C 0.087 3.913 16 C -0.143 4.143 17 C -0.037 4.037 18 C -0.187 4.187 19 O -0.342 6.342 20 Si 0.587 3.413 21 C -0.170 4.170 22 C -0.091 4.091 23 C -0.221 4.221 24 C -0.193 4.193 25 H 0.062 0.938 26 H 0.062 0.938 27 H 0.107 0.893 28 H 0.100 0.900 29 H 0.115 0.885 30 H 0.089 0.911 31 H 0.089 0.911 32 H 0.238 0.762 33 H 0.125 0.875 34 H 0.125 0.875 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.150 0.850 38 H 0.096 0.904 39 H 0.228 0.772 40 H -0.179 1.179 41 H -0.187 1.187 42 H 0.146 0.854 43 H 0.149 0.851 44 H 0.151 0.849 45 H 0.110 0.890 46 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -3.456 1.642 -0.327 3.840 hybrid contribution -0.462 -1.229 -0.488 1.401 sum -3.918 0.413 -0.815 4.023 Atomic orbital electron populations 1.22847 0.80486 1.03102 1.00197 1.87876 1.20060 1.26345 1.94579 1.23049 0.94554 0.85462 0.96714 0.90571 1.23191 0.94080 1.03136 0.96535 1.22755 0.92754 1.00619 0.97500 0.88036 1.21443 0.94035 0.98437 0.85681 1.45956 1.25586 1.40926 1.25425 1.20293 0.80583 0.82089 0.86516 1.90753 1.61239 1.30499 1.59194 1.21470 0.97563 1.02755 0.96372 1.22414 0.94074 0.98665 0.84945 1.85969 1.36447 1.60231 1.40395 1.18924 0.86025 0.92522 0.93840 1.20201 0.96168 1.02141 0.95771 1.19008 0.94031 0.95637 0.94997 1.24838 1.08081 0.88026 0.97726 1.86599 1.81353 1.22462 1.43812 0.94966 0.76886 0.89637 0.79823 1.20855 1.00828 0.99364 0.95975 1.20896 0.94213 0.98519 0.95444 1.21387 0.99133 0.99738 1.01872 1.23580 0.96131 1.01464 0.98097 0.93761 0.93841 0.89343 0.90014 0.88465 0.91077 0.91092 0.76183 0.87473 0.87475 0.90940 0.90885 0.84982 0.90357 0.77208 1.17936 1.18667 0.85394 0.85050 0.84931 0.88969 0.90586 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.37 -0.34 10.64 -35.23 -0.37 -0.71 16 3 C 0.06 -0.06 4.37 -25.92 -0.11 -0.17 16 4 H 0.08 -0.14 7.87 -51.93 -0.41 -0.55 16 5 C -0.13 0.20 7.47 -25.92 -0.19 0.01 16 6 C -0.12 0.21 3.69 -89.81 -0.33 -0.12 16 7 H 0.10 -0.14 8.14 -51.93 -0.42 -0.56 16 8 C 0.13 -0.11 5.51 -4.04 -0.02 -0.13 16 9 N -0.73 0.90 5.56 -60.29 -0.33 0.56 16 10 C 0.52 0.48 7.83 -10.99 -0.09 0.40 16 11 O -0.54 -2.66 15.98 5.55 0.09 -2.57 16 12 C -0.14 0.15 6.07 -27.88 -0.17 -0.02 16 13 C 0.07 0.08 4.03 37.16 0.15 0.23 16 14 O -0.32 -0.87 10.14 -19.41 -0.20 -1.07 16 15 C 0.13 0.43 6.69 -39.22 -0.26 0.17 16 16 C -0.12 -0.41 9.55 -39.43 -0.38 -0.78 16 17 C -0.04 -0.09 5.42 -104.65 -0.57 -0.66 16 18 C -0.08 -0.06 2.81 36.00 0.10 0.05 16 19 O -0.54 -1.04 12.74 -35.23 -0.45 -1.49 16 20 Si 0.69 -0.25 29.79 -169.99 -5.06 -5.31 16 21 C -0.15 -0.23 8.67 -39.56 -0.34 -0.57 16 22 C -0.07 -0.10 10.04 -39.61 -0.40 -0.49 16 23 C -0.20 -0.45 9.04 -39.43 -0.36 -0.80 16 24 C -0.16 0.28 7.46 -25.92 -0.19 0.09 16 25 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 26 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 27 H 0.09 -0.18 8.14 -51.93 -0.42 -0.61 16 28 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.10 -0.25 8.10 -51.93 -0.42 -0.67 16 30 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 31 H 0.07 -0.01 7.84 -51.92 -0.41 -0.42 16 32 H 0.40 -1.46 8.47 -40.82 -0.35 -1.81 16 33 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 34 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 35 H 0.07 0.11 7.60 -51.93 -0.39 -0.28 16 36 H 0.07 0.09 7.63 -51.93 -0.40 -0.31 16 37 H 0.13 0.38 8.06 -52.49 -0.42 -0.04 16 38 H 0.08 -0.08 7.96 -51.93 -0.41 -0.50 16 39 H 0.38 -0.85 8.74 45.56 0.40 -0.45 16 40 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 41 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 42 H 0.13 -0.06 4.87 -52.48 -0.26 -0.32 16 43 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 44 H 0.13 0.14 6.30 -52.49 -0.33 -0.19 16 45 H 0.09 -0.22 7.90 -51.93 -0.41 -0.63 16 46 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 LS Contribution 381.25 15.07 5.75 5.75 Total: 0.00 -8.73 381.25 -9.88 -18.61 By element: Atomic # 1 Polarization: -4.78 SS G_CDS: -7.23 Total: -12.01 kcal Atomic # 6 Polarization: 0.30 SS G_CDS: -2.07 Total: -1.76 kcal Atomic # 7 Polarization: 0.90 SS G_CDS: -0.33 Total: 0.56 kcal Atomic # 8 Polarization: -4.91 SS G_CDS: -0.93 Total: -5.84 kcal Atomic # 14 Polarization: -0.25 SS G_CDS: -5.06 Total: -5.31 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -8.73 -9.88 -18.61 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12896214_4549614.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.708 kcal (2) G-P(sol) polarization free energy of solvation -8.731 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.438 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.884 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.614 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.322 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds