Wall clock time and date at job start Sat Mar 6 2021 22:25:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42896 * 114.00121 * 2 1 4 4 H 1.08993 * 112.91177 * 341.25070 * 3 2 1 5 5 C 1.53778 * 113.61445 * 112.50307 * 3 2 1 6 6 C 1.53778 * 87.08449 * 89.11333 * 5 3 2 7 7 H 1.08998 * 113.61879 * 270.88747 * 6 5 3 8 8 C 1.53001 * 113.69389 * 139.99094 * 6 5 3 9 9 N 1.46498 * 109.46735 * 87.46692 * 8 6 5 10 10 C 1.34778 * 119.99710 * 180.02562 * 9 8 6 11 11 O 1.21288 * 120.00002 * 0.02562 * 10 9 8 12 12 C 1.50700 * 120.00252 * 179.97438 * 10 9 8 13 13 O 1.42896 * 109.47371 * 179.97438 * 12 10 9 14 14 C 1.35901 * 117.00149 * 180.02562 * 13 12 10 15 15 C 1.38716 * 120.05825 * 179.73207 * 14 13 12 16 16 C 1.38158 * 119.94482 * 179.72192 * 15 14 13 17 17 C 1.50698 * 119.97630 * 180.27033 * 16 15 14 18 18 O 1.42901 * 109.47196 * 300.29953 * 17 16 15 19 19 Si 1.86298 * 109.47596 * 180.29912 * 17 16 15 20 20 C 1.38248 * 120.05478 * 0.57445 * 16 15 14 21 21 C 1.38284 * 120.10968 * 359.67431 * 20 16 15 22 22 C 1.38122 * 120.05951 * 0.05068 * 21 20 16 23 23 C 1.53784 * 113.61245 * 209.99902 * 3 2 1 24 24 H 1.08996 * 109.47543 * 180.02562 * 1 2 3 25 25 H 1.09002 * 109.47114 * 300.00404 * 1 2 3 26 26 H 1.09002 * 109.47087 * 59.99885 * 1 2 3 27 27 H 1.08999 * 113.61526 * 334.56668 * 5 3 2 28 28 H 1.08999 * 113.69218 * 203.67292 * 5 3 2 29 29 H 1.08997 * 109.47307 * 207.46880 * 8 6 5 30 30 H 1.09003 * 109.47172 * 327.46784 * 8 6 5 31 31 H 0.96995 * 120.00713 * 359.97438 * 9 8 6 32 32 H 1.08997 * 109.47256 * 300.00272 * 12 10 9 33 33 H 1.09003 * 109.46794 * 59.99914 * 12 10 9 34 34 H 1.08001 * 120.02514 * 359.97438 * 15 14 13 35 35 H 1.08999 * 109.46796 * 60.29801 * 17 16 15 36 36 H 0.96698 * 114.00296 * 299.99742 * 18 17 16 37 37 H 1.48498 * 109.99816 * 58.67971 * 19 17 16 38 38 H 1.48495 * 110.00004 * 180.02562 * 19 17 16 39 39 H 1.08004 * 119.94634 * 179.70648 * 20 16 15 40 40 H 1.08004 * 119.97279 * 180.02562 * 21 20 16 41 41 H 1.08004 * 120.02865 * 179.97438 * 22 21 20 42 42 H 1.09004 * 113.61451 * 156.33817 * 23 3 2 43 43 H 1.08994 * 113.61477 * 25.43119 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3144 2.0797 -0.3227 5 6 2.7535 1.6488 1.3017 6 6 4.0062 1.0329 0.6566 7 1 4.1085 -0.0373 0.8360 8 6 5.2921 1.8095 0.9466 9 7 5.8771 1.3335 2.2026 10 6 7.0217 1.8774 2.6615 11 8 7.5671 2.7612 2.0349 12 6 7.6234 1.3883 3.9537 13 8 8.8245 2.1135 4.2246 14 6 9.4962 1.7921 5.3614 15 6 10.6728 2.4525 5.6835 16 6 11.3507 2.1279 6.8427 17 6 12.6258 2.8491 7.1963 18 8 13.5888 2.6504 6.1594 19 14 13.2940 2.1789 8.8010 20 6 10.8638 1.1376 7.6754 21 6 9.6938 0.4743 7.3540 22 6 9.0092 0.7990 6.1991 23 6 3.3756 1.3718 -0.7045 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3633 0.5139 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 2.3927 1.0963 2.1693 28 1 2.8396 2.7194 1.4876 29 1 6.0014 1.6545 0.1337 30 1 5.0636 2.8719 1.0319 31 1 5.4405 0.6276 2.7043 32 1 6.9138 1.5433 4.7665 33 1 7.8521 0.3259 3.8688 34 1 11.0564 3.2226 5.0306 35 1 12.4226 3.9146 7.3041 36 1 13.8181 1.7233 6.0079 37 1 13.5451 0.7206 8.6769 38 1 14.5511 2.8825 9.1610 39 1 11.3977 0.8820 8.5788 40 1 9.3151 -0.2987 8.0063 41 1 8.0957 0.2803 5.9483 42 1 3.6313 2.3669 -1.0685 43 1 3.5170 0.5956 -1.4566 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12896214_4860298.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 22:25:10 Heat of formation + Delta-G solvation = -87.677268 kcal Electronic energy + Delta-G solvation = -24234.852599 eV Core-core repulsion = 20441.493813 eV Total energy + Delta-G solvation = -3793.358786 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.55053 -40.96263 -40.23026 -38.93969 -37.42810 -37.22857 -35.27292 -32.49883 -31.82042 -30.28869 -28.36364 -27.38668 -26.83102 -26.67791 -23.78953 -23.68074 -22.51252 -21.61927 -20.53910 -19.33788 -18.62494 -17.89639 -17.51354 -17.39440 -17.27336 -16.98224 -16.66364 -16.53364 -16.32820 -16.17317 -15.81962 -15.45716 -15.10062 -14.85140 -14.65845 -14.44522 -14.10919 -14.02111 -13.88104 -13.53788 -13.44796 -13.00257 -12.96341 -12.62862 -12.56531 -12.15843 -12.00906 -11.96310 -11.77273 -11.58550 -11.33477 -10.85974 -10.64274 -10.58339 -10.17543 -9.93516 -9.27352 -4.94444 0.19001 0.39633 1.26294 1.47559 1.50520 1.61692 1.97837 2.55733 2.57537 2.65676 3.35873 3.40303 3.44579 3.56095 3.62383 3.64213 3.72824 3.77371 3.87534 3.88704 4.00803 4.14034 4.18234 4.20209 4.36171 4.36658 4.38209 4.54648 4.55216 4.60290 4.62939 4.67083 4.68846 4.74822 4.93069 4.96277 5.05176 5.14467 5.22751 5.34296 5.34522 5.42901 5.63955 6.14456 6.24010 6.38625 6.42538 7.09984 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.370 6.370 3 C 0.061 3.939 4 H 0.077 0.923 5 C -0.155 4.155 6 C -0.117 4.117 7 H 0.102 0.898 8 C 0.129 3.871 9 N -0.726 5.726 10 C 0.514 3.486 11 O -0.513 6.513 12 C 0.041 3.959 13 O -0.288 6.288 14 C 0.129 3.871 15 C -0.121 4.121 16 C -0.078 4.078 17 C -0.077 4.077 18 O -0.528 6.528 19 Si 0.690 3.310 20 C -0.154 4.154 21 C -0.073 4.073 22 C -0.206 4.206 23 C -0.131 4.131 24 H 0.088 0.912 25 H 0.043 0.957 26 H 0.044 0.956 27 H 0.075 0.925 28 H 0.092 0.908 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.403 0.597 32 H 0.095 0.905 33 H 0.094 0.906 34 H 0.136 0.864 35 H 0.121 0.879 36 H 0.376 0.624 37 H -0.260 1.260 38 H -0.257 1.257 39 H 0.130 0.870 40 H 0.131 0.869 41 H 0.130 0.870 42 H 0.097 0.903 43 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.555 -3.423 3.037 7.994 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.289 6.289 3 C 0.002 3.998 4 H 0.095 0.905 5 C -0.193 4.193 6 C -0.136 4.136 7 H 0.120 0.880 8 C 0.007 3.993 9 N -0.380 5.380 10 C 0.298 3.702 11 O -0.387 6.387 12 C -0.038 4.038 13 O -0.201 6.201 14 C 0.084 3.916 15 C -0.140 4.140 16 C -0.079 4.079 17 C -0.187 4.187 18 O -0.334 6.334 19 Si 0.591 3.409 20 C -0.171 4.171 21 C -0.091 4.091 22 C -0.225 4.225 23 C -0.169 4.169 24 H 0.107 0.893 25 H 0.062 0.938 26 H 0.063 0.937 27 H 0.094 0.906 28 H 0.111 0.889 29 H 0.091 0.909 30 H 0.090 0.910 31 H 0.237 0.763 32 H 0.113 0.887 33 H 0.112 0.888 34 H 0.154 0.846 35 H 0.139 0.861 36 H 0.224 0.776 37 H -0.185 1.185 38 H -0.182 1.182 39 H 0.147 0.853 40 H 0.149 0.851 41 H 0.148 0.852 42 H 0.116 0.884 43 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -5.356 -2.530 2.779 6.543 hybrid contribution -0.330 -0.950 -0.680 1.214 sum -5.686 -3.480 2.099 6.989 Atomic orbital electron populations 1.22847 0.80477 1.03096 1.00213 1.87873 1.20066 1.26349 1.94580 1.23042 0.94561 0.85475 0.96687 0.90529 1.23584 0.96100 1.01519 0.98088 1.22757 0.92654 1.00607 0.97583 0.88013 1.21457 0.94022 0.98536 0.85335 1.45807 1.25230 1.41237 1.25727 1.20035 0.80995 0.82807 0.86328 1.90794 1.60463 1.29323 1.58119 1.22463 0.87376 0.97208 0.96752 1.86175 1.35935 1.59255 1.38694 1.19050 0.92351 0.94388 0.85846 1.20273 0.93439 1.02149 0.98102 1.20100 0.96789 0.96460 0.94520 1.25109 0.87596 1.05233 1.00763 1.86618 1.60459 1.31466 1.54830 0.94932 0.84958 0.79639 0.81384 1.20941 0.98101 0.97955 1.00139 1.20904 0.94065 0.98414 0.95698 1.21304 1.02820 1.00831 0.97522 1.23194 0.94042 1.03193 0.96498 0.89345 0.93848 0.93742 0.90594 0.88930 0.90928 0.90950 0.76291 0.88725 0.88796 0.84592 0.86126 0.77599 1.18488 1.18197 0.85297 0.85083 0.85229 0.88416 0.89980 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.85 101.05 1.10 1.05 16 2 O -0.37 -0.23 10.63 -35.23 -0.37 -0.61 16 3 C 0.06 -0.07 4.37 -25.92 -0.11 -0.18 16 4 H 0.08 -0.15 7.87 -51.93 -0.41 -0.56 16 5 C -0.16 0.33 7.47 -25.92 -0.19 0.13 16 6 C -0.12 0.24 3.68 -89.81 -0.33 -0.09 16 7 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 8 C 0.13 -0.11 5.51 -4.04 -0.02 -0.13 16 9 N -0.73 0.97 5.56 -60.29 -0.33 0.64 16 10 C 0.51 0.94 7.91 -10.98 -0.09 0.85 16 11 O -0.51 -3.59 16.50 -14.36 -0.24 -3.83 16 12 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 13 O -0.29 -0.98 9.67 -39.34 -0.38 -1.36 16 14 C 0.13 0.29 6.69 -39.22 -0.26 0.02 16 15 C -0.12 -0.31 9.55 -39.43 -0.38 -0.69 16 16 C -0.08 -0.07 5.39 -104.65 -0.56 -0.64 16 17 C -0.08 -0.03 2.82 36.00 0.10 0.07 16 18 O -0.53 -1.09 12.76 -35.23 -0.45 -1.54 16 19 Si 0.69 -0.52 29.79 -169.99 -5.06 -5.59 16 20 C -0.15 0.04 8.67 -39.56 -0.34 -0.30 16 21 C -0.07 0.06 10.04 -39.61 -0.40 -0.34 16 22 C -0.21 0.04 9.04 -39.43 -0.36 -0.32 16 23 C -0.13 0.22 7.47 -25.91 -0.19 0.03 16 24 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 25 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 26 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 28 H 0.09 -0.23 7.90 -51.93 -0.41 -0.64 16 29 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.07 -0.01 7.85 -51.93 -0.41 -0.41 16 31 H 0.40 -1.75 8.47 -40.82 -0.35 -2.09 16 32 H 0.09 -0.30 7.66 -51.93 -0.40 -0.70 16 33 H 0.09 -0.29 7.66 -51.93 -0.40 -0.68 16 34 H 0.14 0.45 8.06 -52.49 -0.42 0.02 16 35 H 0.12 -0.02 7.96 -51.93 -0.41 -0.44 16 36 H 0.38 -0.31 8.70 45.56 0.40 0.08 16 37 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 38 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 39 H 0.13 -0.28 4.87 -52.48 -0.26 -0.53 16 40 H 0.13 -0.41 8.06 -52.48 -0.42 -0.83 16 41 H 0.13 -0.36 6.30 -52.48 -0.33 -0.69 16 42 H 0.10 -0.26 8.10 -51.93 -0.42 -0.68 16 43 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 LS Contribution 360.25 15.07 5.43 5.43 Total: 0.00 -9.63 360.25 -9.66 -19.29 By element: Atomic # 1 Polarization: -5.66 SS G_CDS: -6.40 Total: -12.05 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -1.85 Total: -0.38 kcal Atomic # 7 Polarization: 0.97 SS G_CDS: -0.33 Total: 0.64 kcal Atomic # 8 Polarization: -5.90 SS G_CDS: -1.44 Total: -7.34 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: -5.06 Total: -5.59 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -9.63 -9.66 -19.29 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12896214_4860298.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.387 kcal (2) G-P(sol) polarization free energy of solvation -9.630 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.017 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.660 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.291 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.677 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds