Wall clock time and date at job start Sat Mar 6 2021 20:37:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.42898 * 109.46696 * 2 1 4 4 C 1.35902 * 117.00485 * 82.59017 * 3 2 1 5 5 C 1.38729 * 120.05478 * 182.96165 * 4 3 2 6 6 C 1.38148 * 119.93947 * 179.69715 * 5 4 3 7 7 C 1.38260 * 120.05635 * 0.59651 * 6 5 4 8 8 C 1.50702 * 119.94731 * 179.70101 * 7 6 5 9 9 O 1.42897 * 109.47365 * 244.97636 * 8 7 6 10 10 Si 1.86303 * 109.46664 * 4.97458 * 8 7 6 11 11 C 1.38268 * 120.11196 * 359.67524 * 7 6 5 12 12 C 1.38142 * 120.05337 * 0.02562 * 11 7 6 13 13 C 1.50697 * 109.47307 * 239.99329 * 2 1 3 14 14 O 1.21287 * 119.99379 * 120.00167 * 13 2 1 15 15 N 1.34768 * 120.00489 * 300.00025 * 13 2 1 16 16 C 1.46496 * 120.00454 * 184.89199 * 15 13 2 17 17 C 1.50702 * 112.84878 * 57.19053 * 16 15 13 18 18 C 1.38238 * 119.99962 * 215.18878 * 17 16 15 19 19 C 1.38231 * 119.99901 * 179.72751 * 18 17 16 20 20 C 1.38235 * 120.00035 * 0.27085 * 19 18 17 21 21 C 1.38233 * 119.99810 * 359.97438 * 20 19 18 22 22 C 1.38227 * 120.00145 * 359.97438 * 21 20 19 23 23 C 1.53782 * 113.69118 * 285.92202 * 16 15 13 24 24 C 1.53771 * 87.08316 * 270.87136 * 23 16 15 25 25 H 1.09001 * 113.61669 * 89.11283 * 24 23 16 26 26 F 1.39899 * 113.61581 * 220.01905 * 24 23 16 27 27 C 1.53778 * 87.08341 * 334.56750 * 24 23 16 28 28 H 1.08992 * 109.47586 * 300.00119 * 1 2 3 29 29 H 1.09000 * 109.47047 * 60.00781 * 1 2 3 30 30 H 1.09005 * 109.46723 * 180.02562 * 1 2 3 31 31 H 1.08997 * 109.46636 * 119.99513 * 2 1 3 32 32 H 1.08003 * 120.03170 * 359.97438 * 5 4 3 33 33 H 1.08006 * 119.96742 * 180.31116 * 6 5 4 34 34 H 1.08992 * 109.47408 * 124.97268 * 8 7 6 35 35 H 0.96709 * 113.99618 * 59.99231 * 9 8 7 36 36 H 1.48495 * 110.00284 * 58.68527 * 10 8 7 37 37 H 1.48504 * 109.99667 * 180.02562 * 10 8 7 38 38 H 1.07996 * 119.96931 * 180.02562 * 11 7 6 39 39 H 1.07995 * 120.02533 * 180.02562 * 12 11 7 40 40 H 0.97006 * 119.99964 * 4.89371 * 15 13 2 41 41 H 1.07998 * 120.00034 * 359.97438 * 18 17 16 42 42 H 1.08005 * 119.99759 * 180.25632 * 19 18 17 43 43 H 1.07995 * 120.00088 * 179.97438 * 20 19 18 44 44 H 1.08003 * 119.99704 * 179.97438 * 21 20 19 45 45 H 1.08004 * 120.00189 * 179.97438 * 22 21 20 46 46 H 1.09007 * 113.61157 * 25.42204 * 23 16 15 47 47 H 1.08998 * 113.61980 * 156.31757 * 23 16 15 48 48 H 1.09002 * 113.61577 * 270.88867 * 27 24 23 49 49 H 1.08993 * 113.61918 * 139.98192 * 27 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.0647 1.9811 1.2007 5 6 2.4588 3.3096 1.2666 6 6 2.5113 3.9534 2.4878 7 6 2.1834 3.2714 3.6449 8 6 2.2480 3.9742 4.9764 9 8 3.2623 3.3730 5.7837 10 14 2.6517 5.7734 4.7099 11 6 1.7957 1.9457 3.5824 12 6 1.7356 1.2991 2.3631 13 6 2.0324 -0.7105 -1.2303 14 8 2.7297 -0.1211 -2.0287 15 7 1.7069 -2.0008 -1.4436 16 6 2.2812 -2.7228 -2.5816 17 6 3.7881 -2.7299 -2.5699 18 6 4.4888 -2.6706 -3.7601 19 6 5.8711 -2.6714 -3.7491 20 6 6.5527 -2.7371 -2.5483 21 6 5.8520 -2.8015 -1.3584 22 6 4.4698 -2.7996 -1.3694 23 6 1.6775 -2.3198 -3.9373 24 6 0.6243 -3.4159 -3.7054 25 1 -0.2571 -3.0677 -3.1668 26 9 0.3063 -4.1407 -4.8590 27 6 1.6603 -4.1116 -2.8069 28 1 -0.3634 0.5138 0.8899 29 1 -0.3633 0.5137 -0.8901 30 1 -0.3633 -1.0277 0.0005 31 1 1.8933 -0.5138 0.8900 32 1 2.7200 3.8414 0.3636 33 1 2.8133 4.9892 2.5391 34 1 1.2850 3.8886 5.4796 35 1 4.1478 3.4125 5.3967 36 1 1.6211 6.4025 3.8455 37 1 2.7190 6.4776 6.0156 38 1 1.5396 1.4152 4.4876 39 1 1.4323 0.2638 2.3148 40 1 1.0923 -2.4515 -0.8435 41 1 3.9563 -2.6197 -4.6983 42 1 6.4185 -2.6209 -4.6787 43 1 7.6326 -2.7382 -2.5397 44 1 6.3846 -2.8533 -0.4203 45 1 3.9223 -2.8503 -0.4398 46 1 1.2633 -1.3115 -3.9484 47 1 2.3346 -2.5177 -4.7841 48 1 2.3129 -4.7995 -3.3446 49 1 1.2323 -4.5499 -1.9054 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:37:59 Heat of formation + Delta-G solvation = -50.641146 kcal Electronic energy + Delta-G solvation = -33918.378471 eV Core-core repulsion = 29307.411727 eV Total energy + Delta-G solvation = -4610.966744 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -48.62495 -42.17025 -41.37715 -40.00798 -39.08969 -38.44518 -37.13538 -34.78248 -32.95314 -32.08154 -31.91374 -31.80673 -31.27494 -27.23057 -26.78920 -26.21923 -25.22699 -24.14426 -23.51695 -22.78278 -22.39450 -21.48481 -20.44571 -19.49628 -18.67368 -18.51549 -18.16870 -17.41461 -17.11447 -16.86619 -16.72228 -16.53926 -16.38680 -16.11141 -15.93604 -15.73324 -15.57882 -15.48362 -15.34819 -14.97758 -14.73777 -14.44489 -14.32642 -14.22660 -14.06805 -13.81761 -13.72308 -13.49672 -13.40087 -13.37612 -13.26945 -12.92049 -12.68936 -12.25665 -12.22621 -12.17293 -12.00748 -11.94051 -11.68160 -11.67721 -11.42452 -10.93816 -10.40816 -10.33989 -10.05380 -9.87229 -9.64605 -9.22523 -4.99766 0.24453 0.31887 0.34639 0.44927 1.33058 1.39163 1.40402 1.63373 1.96126 2.40845 2.64683 2.73632 3.13725 3.21380 3.36335 3.43069 3.51158 3.56488 3.62153 3.73198 3.78885 3.81055 3.85272 3.93567 3.97972 4.04608 4.15648 4.20490 4.26440 4.34530 4.48938 4.51533 4.55557 4.56496 4.59530 4.63204 4.64857 4.66688 4.68771 4.82279 4.98419 4.99087 5.01725 5.08189 5.12026 5.17927 5.27854 5.32005 5.47910 5.50365 5.58070 5.61701 5.67452 6.04795 6.23685 6.41156 6.78408 7.08427 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.064 3.936 3 O -0.311 6.311 4 C 0.123 3.877 5 C -0.161 4.161 6 C -0.075 4.075 7 C -0.162 4.162 8 C -0.063 4.063 9 O -0.556 6.556 10 Si 0.764 3.236 11 C -0.057 4.057 12 C -0.208 4.208 13 C 0.522 3.478 14 O -0.545 6.545 15 N -0.691 5.691 16 C 0.199 3.801 17 C -0.078 4.078 18 C -0.125 4.125 19 C -0.129 4.129 20 C -0.132 4.132 21 C -0.130 4.130 22 C -0.116 4.116 23 C -0.170 4.170 24 C 0.067 3.933 25 H 0.135 0.865 26 F -0.220 7.220 27 C -0.137 4.137 28 H 0.081 0.919 29 H 0.061 0.939 30 H 0.113 0.887 31 H 0.126 0.874 32 H 0.135 0.865 33 H 0.149 0.851 34 H 0.108 0.892 35 H 0.395 0.605 36 H -0.288 1.288 37 H -0.300 1.300 38 H 0.138 0.862 39 H 0.154 0.846 40 H 0.424 0.576 41 H 0.129 0.871 42 H 0.135 0.865 43 H 0.136 0.864 44 H 0.136 0.864 45 H 0.130 0.870 46 H 0.074 0.926 47 H 0.103 0.897 48 H 0.108 0.892 49 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.184 -4.041 3.260 5.326 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C 0.005 3.995 3 O -0.224 6.224 4 C 0.077 3.923 5 C -0.179 4.179 6 C -0.092 4.092 7 C -0.163 4.163 8 C -0.174 4.174 9 O -0.364 6.364 10 Si 0.671 3.329 11 C -0.075 4.075 12 C -0.227 4.227 13 C 0.308 3.692 14 O -0.420 6.420 15 N -0.347 5.347 16 C 0.112 3.888 17 C -0.080 4.080 18 C -0.144 4.144 19 C -0.147 4.147 20 C -0.150 4.150 21 C -0.148 4.148 22 C -0.135 4.135 23 C -0.209 4.209 24 C 0.032 3.968 25 H 0.153 0.847 26 F -0.201 7.201 27 C -0.175 4.175 28 H 0.100 0.900 29 H 0.080 0.920 30 H 0.131 0.869 31 H 0.143 0.857 32 H 0.152 0.848 33 H 0.166 0.834 34 H 0.126 0.874 35 H 0.244 0.756 36 H -0.215 1.215 37 H -0.228 1.228 38 H 0.156 0.844 39 H 0.171 0.829 40 H 0.264 0.736 41 H 0.147 0.853 42 H 0.153 0.847 43 H 0.154 0.846 44 H 0.154 0.846 45 H 0.148 0.852 46 H 0.093 0.907 47 H 0.121 0.879 48 H 0.126 0.874 49 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -1.406 -2.851 2.967 4.349 hybrid contribution -0.580 -0.400 0.048 0.706 sum -1.986 -3.251 3.015 4.858 Atomic orbital electron populations 1.22385 0.90594 1.05873 1.04305 1.22408 0.97063 0.82348 0.97722 1.86191 1.81009 1.26781 1.28456 1.19229 0.96118 0.92605 0.84305 1.20581 1.05428 0.92574 0.99352 1.20966 0.97545 0.99741 0.90970 1.20329 1.04767 0.95879 0.95294 1.24989 0.94466 1.07921 0.89999 1.86461 1.20460 1.82190 1.47251 0.93818 0.88341 0.72528 0.78252 1.20989 0.95225 0.93732 0.97531 1.21479 1.07711 1.01803 0.91659 1.20403 0.79809 0.82161 0.86849 1.90794 1.37896 1.66360 1.46965 1.45396 1.48914 1.10505 1.29885 1.19578 0.88895 0.93744 0.86560 1.19675 0.94131 1.00379 0.93769 1.21267 0.94683 1.00222 0.98182 1.21409 0.94443 0.99839 0.99027 1.21466 1.00988 0.99818 0.92704 1.21423 0.94530 0.99881 0.98972 1.21069 0.94576 1.00105 0.97709 1.24152 0.98447 1.00054 0.98252 1.23323 0.98295 0.91716 0.83502 0.84703 1.92801 1.94703 1.79531 1.53040 1.23920 0.97106 0.94472 1.02006 0.90005 0.92012 0.86859 0.85683 0.84750 0.83380 0.87437 0.75553 1.21490 1.22803 0.84370 0.82864 0.73623 0.85288 0.84723 0.84640 0.84600 0.85176 0.90715 0.87914 0.87406 0.86080 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.35 9.13 71.98 0.66 2.00 16 2 C 0.06 -0.18 2.68 29.85 0.08 -0.10 16 3 O -0.31 -1.65 9.34 -73.41 -0.69 -2.33 16 4 C 0.12 0.35 6.53 22.50 0.15 0.50 16 5 C -0.16 -0.44 9.99 22.37 0.22 -0.22 16 6 C -0.07 0.02 8.66 22.25 0.19 0.22 16 7 C -0.16 0.07 5.35 -19.85 -0.11 -0.04 16 8 C -0.06 0.07 2.80 71.24 0.20 0.27 16 9 O -0.56 0.27 12.83 -148.98 -1.91 -1.65 16 10 Si 0.76 -1.36 29.80 68.60 2.04 0.69 16 11 C -0.06 0.05 9.68 22.25 0.22 0.27 16 12 C -0.21 0.31 8.30 22.36 0.19 0.50 16 13 C 0.52 0.67 6.50 87.66 0.57 1.24 16 14 O -0.54 -6.72 15.45 15.98 0.25 -6.47 16 15 N -0.69 4.13 4.50 -423.93 -1.91 2.22 16 16 C 0.20 -0.48 0.88 3.39 0.00 -0.47 16 17 C -0.08 -0.22 4.08 -19.87 -0.08 -0.30 16 18 C -0.13 -0.56 9.27 22.27 0.21 -0.36 16 19 C -0.13 -0.54 10.05 22.27 0.22 -0.31 16 20 C -0.13 -0.46 10.05 22.27 0.22 -0.24 16 21 C -0.13 -0.38 10.05 22.27 0.22 -0.16 16 22 C -0.12 -0.27 9.03 22.27 0.20 -0.07 16 23 C -0.17 -0.01 6.71 31.12 0.21 0.20 16 24 C 0.07 -0.26 5.58 31.12 0.17 -0.08 16 25 H 0.14 -1.20 8.14 -2.39 -0.02 -1.22 16 26 F -0.22 -0.68 17.41 44.97 0.78 0.10 16 27 C -0.14 0.90 7.23 31.12 0.23 1.12 16 28 H 0.08 -0.62 7.25 -2.39 -0.02 -0.64 16 29 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 30 H 0.11 -1.69 7.46 -2.38 -0.02 -1.71 16 31 H 0.13 -1.02 6.04 -2.39 -0.01 -1.04 16 32 H 0.13 0.31 8.06 -2.91 -0.02 0.29 16 33 H 0.15 -0.67 4.90 -2.91 -0.01 -0.68 16 34 H 0.11 -0.04 7.96 -2.39 -0.02 -0.06 16 35 H 0.39 -3.18 8.70 -74.05 -0.64 -3.82 16 36 H -0.29 -0.96 7.11 99.48 0.71 -0.25 16 37 H -0.30 -1.74 7.11 99.48 0.71 -1.03 16 38 H 0.14 -0.42 8.06 -2.91 -0.02 -0.45 16 39 H 0.15 -1.11 5.66 -2.91 -0.02 -1.13 16 40 H 0.42 -6.05 7.91 -92.70 -0.73 -6.78 16 41 H 0.13 0.32 5.68 -2.91 -0.02 0.30 16 42 H 0.13 0.09 8.06 -2.91 -0.02 0.07 16 43 H 0.14 -0.03 8.06 -2.91 -0.02 -0.06 16 44 H 0.14 -0.13 8.06 -2.91 -0.02 -0.15 16 45 H 0.13 -0.24 7.72 -2.91 -0.02 -0.26 16 46 H 0.07 0.24 8.02 -2.38 -0.02 0.22 16 47 H 0.10 0.13 5.66 -2.39 -0.01 0.11 16 48 H 0.11 -0.50 8.09 -2.39 -0.02 -0.52 16 49 H 0.12 -1.50 8.09 -2.39 -0.02 -1.52 16 Total: 0.00 -26.26 401.83 2.21 -24.05 By element: Atomic # 1 Polarization: -20.25 SS G_CDS: -0.33 Total: -20.57 kcal Atomic # 6 Polarization: -0.01 SS G_CDS: 3.97 Total: 3.97 kcal Atomic # 7 Polarization: 4.13 SS G_CDS: -1.91 Total: 2.22 kcal Atomic # 8 Polarization: -8.10 SS G_CDS: -2.35 Total: -10.45 kcal Atomic # 9 Polarization: -0.68 SS G_CDS: 0.78 Total: 0.10 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: 2.04 Total: 0.69 kcal Total: -26.26 2.21 -24.05 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.591 kcal (2) G-P(sol) polarization free energy of solvation -26.264 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.855 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.214 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.050 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.641 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds