Wall clock time and date at job start Sat Mar 6 2021 20:38:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86308 * 109.46882 * 2 1 4 4 C 1.50690 * 109.47634 * 120.00185 * 2 1 3 5 5 C 1.35457 * 126.06880 * 245.03019 * 4 2 1 6 6 N 1.35532 * 108.87178 * 180.02562 * 5 4 2 7 7 C 1.37646 * 108.64640 * 359.97438 * 6 5 4 8 8 C 1.46680 * 126.23642 * 180.02562 * 7 6 5 9 9 O 1.21688 * 120.00456 * 180.02562 * 8 7 6 10 10 N 1.34775 * 119.99853 * 0.03542 * 8 7 6 11 11 C 1.46498 * 120.00172 * 185.03001 * 10 8 7 12 12 C 1.50695 * 112.85230 * 294.36107 * 11 10 8 13 13 C 1.38233 * 120.00281 * 167.42189 * 12 11 10 14 14 C 1.38241 * 119.99922 * 179.80970 * 13 12 11 15 15 C 1.38230 * 119.99930 * 0.42560 * 14 13 12 16 16 C 1.38238 * 120.00066 * 359.80904 * 15 14 13 17 17 C 1.38233 * 120.00253 * 359.97438 * 16 15 14 18 18 C 1.53788 * 113.69073 * 163.09278 * 11 10 8 19 19 C 1.53786 * 87.08141 * 270.87388 * 18 11 10 20 20 H 1.08999 * 113.61127 * 89.11612 * 19 18 11 21 21 F 1.39900 * 113.68875 * 220.01172 * 19 18 11 22 22 C 1.53780 * 113.61278 * 65.56066 * 11 10 8 23 23 C 1.37871 * 107.53338 * 0.27367 * 7 6 5 24 24 H 0.96700 * 113.99988 * 299.99473 * 1 2 3 25 25 H 1.09004 * 109.47001 * 240.00534 * 2 1 3 26 26 H 1.48501 * 109.99758 * 300.00280 * 3 2 1 27 27 H 1.48497 * 109.99948 * 61.32127 * 3 2 1 28 28 H 1.07997 * 125.56117 * 359.96393 * 5 4 2 29 29 H 0.97007 * 125.67672 * 179.97438 * 6 5 4 30 30 H 0.97008 * 120.00382 * 5.02429 * 10 8 7 31 31 H 1.07998 * 119.99852 * 0.02562 * 13 12 11 32 32 H 1.07996 * 119.99856 * 180.21231 * 14 13 12 33 33 H 1.08005 * 119.99817 * 179.79050 * 15 14 13 34 34 H 1.08002 * 119.99908 * 179.97438 * 16 15 14 35 35 H 1.07997 * 120.00243 * 179.97438 * 17 16 15 36 36 H 1.08997 * 113.61524 * 25.42063 * 18 11 10 37 37 H 1.09004 * 113.61212 * 156.32662 * 18 11 10 38 38 H 1.09001 * 113.61176 * 203.75334 * 22 11 10 39 39 H 1.09003 * 113.61520 * 334.64559 * 22 11 10 40 40 H 1.07997 * 126.45843 * 179.73679 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9314 -0.7104 1.2303 5 6 2.6331 -0.1497 2.2443 6 7 2.9058 -1.1030 3.1683 7 6 2.3696 -2.2964 2.7408 8 6 2.4381 -3.5802 3.4471 9 8 1.9219 -4.5698 2.9622 10 7 3.0727 -3.6637 4.6332 11 6 3.2373 -4.9649 5.2858 12 6 1.9274 -5.5756 5.7125 13 6 1.8770 -6.9009 6.1023 14 6 0.6760 -7.4599 6.4974 15 6 -0.4761 -6.6961 6.4943 16 6 -0.4266 -5.3721 6.0999 17 6 0.7751 -4.8118 5.7090 18 6 4.3085 -4.9716 6.3893 19 6 5.3238 -5.3337 5.2924 20 1 5.7728 -4.4659 4.8094 21 9 6.2703 -6.2826 5.6937 22 6 4.1444 -5.9335 4.5086 23 6 1.7612 -2.0667 1.5252 24 1 -0.3933 0.4416 0.7651 25 1 1.7923 -0.5138 -0.8901 26 1 1.5613 2.4679 -1.2085 27 1 1.5879 2.4586 1.2242 28 1 2.9280 0.8874 2.3058 29 1 3.3971 -0.9668 3.9936 30 1 3.4205 -2.8623 5.0547 31 1 2.7765 -7.4985 6.1015 32 1 0.6373 -8.4943 6.8053 33 1 -1.4150 -7.1338 6.7998 34 1 -1.3268 -4.7754 6.0971 35 1 0.8138 -3.7776 5.4004 36 1 4.4802 -3.9928 6.8371 37 1 4.1671 -5.7584 7.1303 38 1 3.9581 -6.9832 4.7355 39 1 4.1835 -5.7312 3.4382 40 1 1.2476 -2.7961 0.9165 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_10543058.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:38:04 Heat of formation + Delta-G solvation = -2.975565 kcal Electronic energy + Delta-G solvation = -26410.427901 eV Core-core repulsion = 22494.085752 eV Total energy + Delta-G solvation = -3916.342150 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.121 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -48.62567 -42.66586 -41.70453 -39.53939 -38.52775 -37.77824 -34.55214 -32.61006 -31.94599 -31.71022 -30.67499 -27.30153 -26.85524 -25.93685 -24.27220 -23.44725 -22.50851 -21.35955 -20.98543 -20.41417 -20.07320 -18.59674 -17.67270 -17.41983 -17.08789 -16.98262 -16.63434 -16.41179 -16.01954 -15.84525 -15.69311 -15.63589 -15.24274 -14.89089 -14.63906 -14.48576 -14.29462 -13.95328 -13.88330 -13.86611 -13.70974 -13.50668 -13.34095 -12.66012 -12.44022 -12.31688 -11.93833 -11.83818 -11.78374 -11.55810 -11.18465 -10.51532 -10.40737 -10.04246 -9.78477 -9.58926 -9.39174 -4.98669 0.32909 0.41120 0.53462 1.28515 1.47144 1.55857 1.72102 1.89424 1.98538 2.27585 2.72984 3.01701 3.13411 3.35056 3.41763 3.48330 3.59624 3.68733 3.82875 3.96305 3.98614 4.05601 4.12925 4.23818 4.29455 4.37541 4.44094 4.45415 4.61098 4.65408 4.68860 4.79224 4.84183 4.90917 4.99349 5.04794 5.13627 5.24996 5.50472 5.57435 5.65229 5.68561 5.72563 6.08817 6.10759 6.28259 6.51043 7.03283 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.041 4.041 3 Si 0.683 3.317 4 C -0.208 4.208 5 C 0.037 3.963 6 N -0.536 5.536 7 C -0.060 4.060 8 C 0.591 3.409 9 O -0.502 6.502 10 N -0.718 5.718 11 C 0.199 3.801 12 C -0.073 4.073 13 C -0.111 4.111 14 C -0.117 4.117 15 C -0.118 4.118 16 C -0.118 4.118 17 C -0.095 4.095 18 C -0.151 4.151 19 C 0.067 3.933 20 H 0.110 0.890 21 F -0.201 7.201 22 C -0.155 4.155 23 C -0.072 4.072 24 H 0.374 0.626 25 H 0.116 0.884 26 H -0.258 1.258 27 H -0.261 1.261 28 H 0.176 0.824 29 H 0.418 0.582 30 H 0.398 0.602 31 H 0.123 0.877 32 H 0.125 0.875 33 H 0.122 0.878 34 H 0.121 0.879 35 H 0.113 0.887 36 H 0.089 0.911 37 H 0.114 0.886 38 H 0.109 0.891 39 H 0.091 0.909 40 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.623 4.430 3.586 6.754 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.151 4.151 3 Si 0.584 3.416 4 C -0.215 4.215 5 C -0.100 4.100 6 N -0.132 5.132 7 C -0.172 4.172 8 C 0.379 3.621 9 O -0.375 6.375 10 N -0.371 5.371 11 C 0.112 3.888 12 C -0.074 4.074 13 C -0.130 4.130 14 C -0.135 4.135 15 C -0.136 4.136 16 C -0.136 4.136 17 C -0.114 4.114 18 C -0.189 4.189 19 C 0.031 3.969 20 H 0.128 0.872 21 F -0.182 7.182 22 C -0.194 4.194 23 C -0.099 4.099 24 H 0.221 0.779 25 H 0.133 0.867 26 H -0.183 1.183 27 H -0.185 1.185 28 H 0.193 0.807 29 H 0.255 0.745 30 H 0.232 0.768 31 H 0.141 0.859 32 H 0.142 0.858 33 H 0.141 0.859 34 H 0.139 0.861 35 H 0.131 0.869 36 H 0.107 0.893 37 H 0.133 0.867 38 H 0.128 0.872 39 H 0.109 0.891 40 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 3.239 4.170 2.815 5.984 hybrid contribution -0.687 0.375 1.134 1.378 sum 2.552 4.545 3.949 6.539 Atomic orbital electron populations 1.86617 1.18045 1.79848 1.49083 1.24334 0.83384 1.09991 0.97418 0.95397 0.91273 0.74491 0.80413 1.19843 1.07599 0.95030 0.99002 1.21911 1.02756 0.94710 0.90600 1.41927 1.43867 1.07812 1.19606 1.20376 1.11227 0.85962 0.99659 1.17023 0.78047 0.86949 0.80085 1.90929 1.44370 1.35978 1.66257 1.45580 1.60719 1.08854 1.21913 1.19606 0.91831 0.83774 0.93610 1.19487 0.93710 0.94210 1.00002 1.20913 0.98366 0.94043 0.99630 1.21129 0.92553 0.99987 0.99794 1.21206 0.98506 0.94271 0.99591 1.21145 0.97716 0.95568 0.99189 1.20824 0.92202 0.99554 0.98771 1.24015 0.93170 1.04761 0.96959 1.23107 0.86103 0.91026 0.96683 0.87246 1.92838 1.67228 1.66524 1.91596 1.24070 0.93003 1.00732 1.01580 1.21236 0.99023 0.95688 0.93922 0.77881 0.86663 1.18272 1.18550 0.80714 0.74472 0.76773 0.85865 0.85751 0.85950 0.86109 0.86916 0.89279 0.86738 0.87228 0.89070 0.83184 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.80 12.88 -35.23 -0.45 -1.26 16 2 C -0.04 0.02 3.02 36.00 0.11 0.13 16 3 Si 0.68 -1.37 30.60 -169.99 -5.20 -6.57 16 4 C -0.21 0.11 5.43 -105.02 -0.57 -0.46 16 5 C 0.04 -0.11 10.45 -16.91 -0.18 -0.28 16 6 N -0.54 1.86 5.99 -9.39 -0.06 1.80 16 7 C -0.06 0.00 7.05 -81.98 -0.58 -0.58 16 8 C 0.59 0.65 6.09 -12.85 -0.08 0.57 16 9 O -0.50 -2.64 15.19 5.20 0.08 -2.56 16 10 N -0.72 1.43 4.35 -49.22 -0.21 1.22 16 11 C 0.20 -0.15 0.94 -132.16 -0.12 -0.28 16 12 C -0.07 -0.10 4.66 -104.62 -0.49 -0.59 16 13 C -0.11 -0.13 8.68 -39.58 -0.34 -0.48 16 14 C -0.12 -0.15 10.05 -39.58 -0.40 -0.55 16 15 C -0.12 -0.18 10.05 -39.58 -0.40 -0.58 16 16 C -0.12 -0.24 10.05 -39.58 -0.40 -0.63 16 17 C -0.10 -0.20 8.48 -39.58 -0.34 -0.54 16 18 C -0.15 0.38 7.18 -25.91 -0.19 0.19 16 19 C 0.07 -0.09 5.58 -25.92 -0.14 -0.24 16 20 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 21 F -0.20 -0.32 17.41 2.25 0.04 -0.28 16 22 C -0.16 0.01 6.72 -25.92 -0.17 -0.17 16 23 C -0.07 -0.10 10.59 -39.12 -0.41 -0.52 16 24 H 0.37 -0.54 8.70 45.56 0.40 -0.14 16 25 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 26 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 27 H -0.26 0.15 7.11 56.52 0.40 0.55 16 28 H 0.18 -0.98 6.21 -52.49 -0.33 -1.30 16 29 H 0.42 -2.88 8.20 -40.82 -0.33 -3.21 16 30 H 0.40 -2.10 7.81 -40.82 -0.32 -2.42 16 31 H 0.12 -0.05 6.58 -52.49 -0.35 -0.40 16 32 H 0.12 -0.07 8.06 -52.49 -0.42 -0.49 16 33 H 0.12 -0.02 8.06 -52.48 -0.42 -0.45 16 34 H 0.12 0.07 8.06 -52.49 -0.42 -0.36 16 35 H 0.11 0.18 6.55 -52.49 -0.34 -0.17 16 36 H 0.09 -0.40 8.10 -51.93 -0.42 -0.82 16 37 H 0.11 -0.24 7.76 -51.93 -0.40 -0.65 16 38 H 0.11 0.01 6.25 -51.93 -0.32 -0.32 16 39 H 0.09 0.12 7.53 -51.93 -0.39 -0.27 16 40 H 0.15 0.40 8.06 -52.49 -0.42 -0.02 16 LS Contribution 337.66 15.07 5.09 5.09 Total: 0.00 -9.40 337.66 -9.95 -19.35 By element: Atomic # 1 Polarization: -7.25 SS G_CDS: -4.54 Total: -11.79 kcal Atomic # 6 Polarization: -0.30 SS G_CDS: -4.70 Total: -5.00 kcal Atomic # 7 Polarization: 3.29 SS G_CDS: -0.27 Total: 3.02 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -0.37 Total: -3.81 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.04 Total: -0.28 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: -5.20 Total: -6.57 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -9.40 -9.95 -19.35 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_10543058.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.375 kcal (2) G-P(sol) polarization free energy of solvation -9.398 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.977 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.953 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.350 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.976 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds