Wall clock time and date at job start Sat Mar 6 2021 20:38:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.35534 * 125.67779 * 2 1 4 4 C 1.35445 * 108.87412 * 179.97438 * 3 2 1 5 5 C 1.50704 * 126.07049 * 179.73987 * 4 3 2 6 6 O 1.42898 * 109.46984 * 120.02745 * 5 4 3 7 7 Si 1.86298 * 109.47014 * 0.02773 * 5 4 3 8 8 C 1.39837 * 107.86509 * 0.02562 * 4 3 2 9 9 C 1.37642 * 125.67929 * 180.02562 * 2 1 3 10 10 C 1.46684 * 126.23329 * 0.03012 * 9 2 1 11 11 O 1.21693 * 120.00073 * 186.02352 * 10 9 2 12 12 N 1.34772 * 119.99662 * 6.01851 * 10 9 2 13 13 C 1.46503 * 119.99854 * 184.52020 * 12 10 9 14 14 C 1.50699 * 112.84577 * 68.40276 * 13 12 10 15 15 C 1.38240 * 120.00130 * 193.96488 * 14 13 12 16 16 C 1.38234 * 120.00246 * 179.76268 * 15 14 13 17 17 C 1.38237 * 119.99782 * 0.49045 * 16 15 14 18 18 C 1.38232 * 120.00142 * 359.78503 * 17 16 15 19 19 C 1.38236 * 120.00178 * 359.95697 * 18 17 16 20 20 C 1.53774 * 113.61896 * 297.20759 * 13 12 10 21 21 C 1.53777 * 87.08061 * 270.88331 * 20 13 12 22 22 H 1.08996 * 113.62104 * 89.19822 * 21 20 13 23 23 F 1.39902 * 113.61404 * 220.01945 * 21 20 13 24 24 C 1.53778 * 87.08113 * 334.56259 * 21 20 13 25 25 H 1.09003 * 109.47368 * 96.48799 * 1 2 3 26 26 H 1.09000 * 109.46946 * 216.49510 * 1 2 3 27 27 H 1.08999 * 109.47107 * 336.49623 * 1 2 3 28 28 H 1.08003 * 125.56086 * 359.97438 * 3 2 1 29 29 H 1.08999 * 109.47216 * 240.02747 * 5 4 3 30 30 H 0.96694 * 113.99971 * 299.99652 * 6 5 4 31 31 H 1.48500 * 110.00071 * 58.68012 * 7 5 4 32 32 H 1.48494 * 110.00177 * 180.02562 * 7 5 4 33 33 H 1.07994 * 126.46107 * 179.97438 * 8 4 3 34 34 H 0.96996 * 120.00611 * 4.52868 * 12 10 9 35 35 H 1.08003 * 119.99473 * 0.02562 * 15 14 13 36 36 H 1.07996 * 120.00195 * 180.25213 * 16 15 14 37 37 H 1.07996 * 119.99651 * 179.76519 * 17 16 15 38 38 H 1.08001 * 120.00078 * 179.97438 * 18 17 16 39 39 H 1.07994 * 120.00430 * 180.02562 * 19 18 17 40 40 H 1.09000 * 113.61315 * 25.42922 * 20 13 12 41 41 H 1.08998 * 113.62027 * 156.24464 * 20 13 12 42 42 H 1.09003 * 113.62096 * 270.88559 * 24 21 20 43 43 H 1.09003 * 113.61614 * 139.97665 * 24 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1010 0.0000 4 6 3.5521 0.7094 0.0006 5 6 4.7537 1.6190 -0.0048 6 8 5.5414 1.3743 1.1621 7 14 4.1886 3.3942 -0.0116 8 6 3.5780 -0.6887 0.0004 9 6 2.2678 -1.1181 -0.0005 10 6 1.8124 -2.5124 -0.0017 11 8 2.6197 -3.4163 0.1085 12 7 0.4998 -2.7924 -0.1249 13 6 0.0341 -4.1780 -0.0269 14 6 0.1796 -4.7474 1.3608 15 6 0.0634 -6.1098 1.5646 16 6 0.2017 -6.6326 2.8367 17 6 0.4462 -5.7921 3.9066 18 6 0.5567 -4.4292 3.7037 19 6 0.4237 -3.9068 2.4308 20 6 0.5896 -5.0942 -1.1300 21 6 -0.6305 -4.6875 -1.9730 22 1 -0.4654 -3.7968 -2.5791 23 9 -1.1859 -5.7450 -2.7014 24 6 -1.3549 -4.4064 -0.6460 25 1 -0.3634 -0.1161 -1.0211 26 1 -0.3633 -0.8262 0.6112 27 1 -0.3633 0.9424 0.4098 28 1 1.9081 2.1236 -0.0004 29 1 5.3524 1.4248 -0.8947 30 1 5.0715 1.5274 1.9931 31 1 3.3449 3.6632 1.1805 32 1 5.3642 4.3014 -0.0175 33 1 4.4583 -1.3143 0.0003 34 1 -0.1365 -2.0767 -0.2785 35 1 -0.1312 -6.7660 0.7292 36 1 0.1150 -7.6973 2.9954 37 1 0.5504 -6.2002 4.9011 38 1 0.7472 -3.7725 4.5397 39 1 0.5104 -2.8422 2.2722 40 1 1.5390 -4.7536 -1.5434 41 1 0.6013 -6.1492 -0.8566 42 1 -1.8764 -5.2735 -0.2407 43 1 -1.9754 -3.5105 -0.6685 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:38:07 Heat of formation + Delta-G solvation = 11.930962 kcal Electronic energy + Delta-G solvation = -28879.580305 eV Core-core repulsion = 24808.346932 eV Total energy + Delta-G solvation = -4071.233373 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -48.59944 -42.80342 -41.68961 -39.57763 -38.47680 -37.85646 -35.09958 -33.63373 -31.98636 -31.75644 -30.85853 -28.63058 -27.27229 -26.42193 -25.63576 -24.04592 -23.42509 -22.50047 -21.37095 -20.98397 -20.35612 -18.94749 -18.60766 -17.63248 -17.39986 -17.03623 -17.00267 -16.84897 -16.59791 -15.99658 -15.91305 -15.76015 -15.66254 -15.46233 -15.20214 -15.10610 -14.45712 -14.30977 -14.08372 -14.02041 -13.89193 -13.71761 -13.57468 -13.48553 -13.41353 -13.19408 -12.64111 -12.38498 -12.32533 -11.96942 -11.82233 -11.77125 -11.55540 -11.10226 -10.50716 -10.37521 -9.83218 -9.77733 -9.62781 -9.33999 -4.98148 0.34909 0.37666 0.48837 1.28858 1.49020 1.52525 1.59845 1.79485 1.99499 2.30131 2.70807 3.03472 3.15652 3.28223 3.35233 3.39250 3.48439 3.57096 3.64777 3.73115 3.82994 3.94943 4.01318 4.03260 4.05646 4.11941 4.20740 4.36690 4.38822 4.46082 4.47058 4.58512 4.63335 4.71801 4.85338 4.90717 4.94072 5.01508 5.06944 5.11177 5.26297 5.53257 5.58576 5.61669 5.66280 5.79781 5.95794 6.05356 6.26217 6.53255 7.06927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.428 5.428 3 C 0.034 3.966 4 C -0.208 4.208 5 C -0.039 4.039 6 O -0.530 6.530 7 Si 0.681 3.319 8 C -0.074 4.074 9 C -0.062 4.062 10 C 0.593 3.407 11 O -0.506 6.506 12 N -0.724 5.724 13 C 0.195 3.805 14 C -0.073 4.073 15 C -0.110 4.110 16 C -0.115 4.115 17 C -0.118 4.118 18 C -0.117 4.117 19 C -0.103 4.103 20 C -0.155 4.155 21 C 0.067 3.933 22 H 0.110 0.890 23 F -0.202 7.202 24 C -0.151 4.151 25 H 0.087 0.913 26 H 0.088 0.912 27 H 0.102 0.898 28 H 0.174 0.826 29 H 0.115 0.885 30 H 0.374 0.626 31 H -0.260 1.260 32 H -0.258 1.258 33 H 0.151 0.849 34 H 0.399 0.601 35 H 0.125 0.875 36 H 0.125 0.875 37 H 0.123 0.877 38 H 0.121 0.879 39 H 0.112 0.888 40 H 0.095 0.905 41 H 0.108 0.892 42 H 0.114 0.886 43 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.544 4.306 -0.711 7.866 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 N -0.104 5.104 3 C -0.101 4.101 4 C -0.214 4.214 5 C -0.149 4.149 6 O -0.336 6.336 7 Si 0.582 3.418 8 C -0.100 4.100 9 C -0.173 4.173 10 C 0.381 3.619 11 O -0.380 6.380 12 N -0.381 5.381 13 C 0.108 3.892 14 C -0.075 4.075 15 C -0.128 4.128 16 C -0.133 4.133 17 C -0.136 4.136 18 C -0.135 4.135 19 C -0.121 4.121 20 C -0.194 4.194 21 C 0.030 3.970 22 H 0.127 0.873 23 F -0.182 7.182 24 C -0.189 4.189 25 H 0.105 0.895 26 H 0.106 0.894 27 H 0.120 0.880 28 H 0.191 0.809 29 H 0.133 0.867 30 H 0.221 0.779 31 H -0.185 1.185 32 H -0.183 1.183 33 H 0.168 0.832 34 H 0.240 0.760 35 H 0.143 0.857 36 H 0.143 0.857 37 H 0.141 0.859 38 H 0.139 0.861 39 H 0.130 0.870 40 H 0.114 0.886 41 H 0.127 0.873 42 H 0.133 0.867 43 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -5.919 4.199 -0.676 7.288 hybrid contribution -0.215 -0.066 1.074 1.098 sum -6.134 4.133 0.399 7.407 Atomic orbital electron populations 1.22427 0.76961 1.05630 1.04108 1.43926 1.06134 1.05586 1.54767 1.21840 0.90076 0.91558 1.06638 1.19820 0.93790 0.94791 1.13048 1.24323 0.92516 1.07262 0.90844 1.86606 1.41141 1.90044 1.15774 0.95496 0.82920 0.74858 0.88521 1.21205 0.94632 0.93981 1.00182 1.20403 0.91051 0.85903 1.19924 1.17011 0.81865 0.86734 0.76245 1.90902 1.53254 1.45755 1.48040 1.46158 1.08280 1.08063 1.75636 1.19632 0.95380 0.82120 0.92075 1.19540 1.00815 0.93772 0.93326 1.20939 1.00380 0.94027 0.97484 1.21151 0.99577 1.00001 0.92556 1.21213 0.99545 0.93637 0.99198 1.21142 0.99874 0.95575 0.96912 1.20831 0.99579 0.99262 0.92411 1.24058 0.99204 1.01394 0.94705 1.23107 0.94519 0.88728 0.90598 0.87277 1.92836 1.86518 1.59072 1.79782 1.24008 0.95289 1.04625 0.94981 0.89489 0.89402 0.87970 0.80875 0.86687 0.77853 1.18533 1.18258 0.83161 0.76033 0.85746 0.85677 0.85894 0.86079 0.86978 0.88615 0.87330 0.86720 0.89415 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.30 9.49 59.85 0.57 0.27 16 2 N -0.43 0.84 3.16 -120.24 -0.38 0.46 16 3 C 0.03 -0.06 9.92 -16.91 -0.17 -0.23 16 4 C -0.21 -0.04 5.44 -105.02 -0.57 -0.61 16 5 C -0.04 0.00 3.02 36.01 0.11 0.11 16 6 O -0.53 -1.01 12.88 -35.23 -0.45 -1.46 16 7 Si 0.68 -1.13 30.59 -169.99 -5.20 -6.33 16 8 C -0.07 -0.16 10.60 -39.12 -0.41 -0.58 16 9 C -0.06 -0.07 6.88 -81.98 -0.56 -0.63 16 10 C 0.59 1.20 6.29 -12.85 -0.08 1.12 16 11 O -0.51 -2.99 15.33 5.20 0.08 -2.91 16 12 N -0.72 0.86 3.90 -49.22 -0.19 0.67 16 13 C 0.19 -0.08 0.94 -132.16 -0.12 -0.20 16 14 C -0.07 -0.10 4.85 -104.62 -0.51 -0.61 16 15 C -0.11 -0.13 8.76 -39.58 -0.35 -0.47 16 16 C -0.11 -0.13 10.05 -39.58 -0.40 -0.52 16 17 C -0.12 -0.15 10.05 -39.58 -0.40 -0.55 16 18 C -0.12 -0.19 10.05 -39.58 -0.40 -0.59 16 19 C -0.10 -0.18 8.98 -39.58 -0.36 -0.54 16 20 C -0.16 -0.08 6.62 -25.92 -0.17 -0.25 16 21 C 0.07 -0.06 5.58 -25.92 -0.14 -0.20 16 22 H 0.11 -0.25 8.14 -51.93 -0.42 -0.68 16 23 F -0.20 -0.39 17.41 2.25 0.04 -0.35 16 24 C -0.15 0.34 7.19 -25.92 -0.19 0.15 16 25 H 0.09 -0.65 8.06 -51.93 -0.42 -1.07 16 26 H 0.09 -0.55 6.06 -51.93 -0.31 -0.86 16 27 H 0.10 -0.78 8.12 -51.93 -0.42 -1.20 16 28 H 0.17 -0.83 6.19 -52.48 -0.32 -1.16 16 29 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 30 H 0.37 -0.36 8.70 45.56 0.40 0.04 16 31 H -0.26 0.01 7.11 56.52 0.40 0.41 16 32 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 33 H 0.15 0.50 8.06 -52.49 -0.42 0.07 16 34 H 0.40 -1.62 4.59 -40.82 -0.19 -1.81 16 35 H 0.12 -0.04 6.50 -52.48 -0.34 -0.39 16 36 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 37 H 0.12 -0.06 8.06 -52.49 -0.42 -0.48 16 38 H 0.12 0.01 8.06 -52.49 -0.42 -0.41 16 39 H 0.11 0.12 6.77 -52.49 -0.36 -0.24 16 40 H 0.10 0.22 7.00 -51.93 -0.36 -0.15 16 41 H 0.11 0.05 6.18 -51.93 -0.32 -0.27 16 42 H 0.11 -0.24 7.82 -51.93 -0.41 -0.64 16 43 H 0.09 -0.38 8.10 -51.93 -0.42 -0.80 16 LS Contribution 354.57 15.07 5.34 5.34 Total: 0.00 -9.53 354.57 -10.12 -19.65 By element: Atomic # 1 Polarization: -5.53 SS G_CDS: -5.20 Total: -10.73 kcal Atomic # 6 Polarization: -0.18 SS G_CDS: -4.15 Total: -4.33 kcal Atomic # 7 Polarization: 1.70 SS G_CDS: -0.57 Total: 1.12 kcal Atomic # 8 Polarization: -4.00 SS G_CDS: -0.37 Total: -4.37 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.35 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: -5.20 Total: -6.33 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -9.53 -10.12 -19.65 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.579 kcal (2) G-P(sol) polarization free energy of solvation -9.531 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.047 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.116 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.648 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.931 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds