Wall clock time and date at job start Sat Mar 6 2021 20:38:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37654 * 125.67913 * 2 1 4 4 C 1.46668 * 126.23510 * 359.97438 * 3 2 1 5 5 O 1.21691 * 120.00473 * 187.23618 * 4 3 2 6 6 N 1.34782 * 120.00001 * 7.23266 * 4 3 2 7 7 C 1.46502 * 120.00077 * 184.40713 * 6 4 3 8 8 C 1.50699 * 112.84744 * 65.43133 * 7 6 4 9 9 C 1.38232 * 119.99920 * 194.12730 * 8 7 6 10 10 C 1.38237 * 120.00187 * 179.74478 * 9 8 7 11 11 C 1.38241 * 119.99453 * 0.53155 * 10 9 8 12 12 C 1.38234 * 119.99990 * 359.74079 * 11 10 9 13 13 C 1.38226 * 120.00112 * 359.97438 * 12 11 10 14 14 C 1.53775 * 113.61773 * 294.23385 * 7 6 4 15 15 C 1.53789 * 87.08041 * 270.88373 * 14 7 6 16 16 H 1.09006 * 113.60824 * 89.11743 * 15 14 7 17 17 F 1.39897 * 113.61422 * 219.93155 * 15 14 7 18 18 C 1.53779 * 113.61445 * 196.62357 * 7 6 4 19 19 C 1.37870 * 107.53032 * 180.27924 * 3 2 1 20 20 C 1.39838 * 107.09050 * 359.74420 * 19 3 2 21 21 C 1.35446 * 107.86031 * 359.97438 * 20 19 3 22 22 C 1.50706 * 125.56194 * 180.02562 * 21 20 19 23 23 O 1.42907 * 109.46872 * 150.02789 * 22 21 20 24 24 Si 1.86303 * 109.47024 * 30.02987 * 22 21 20 25 25 H 1.09004 * 109.46893 * 277.72414 * 1 2 3 26 26 H 1.09001 * 109.46958 * 37.72570 * 1 2 3 27 27 H 1.08994 * 109.46881 * 157.72570 * 1 2 3 28 28 H 0.97006 * 119.99745 * 4.41307 * 6 4 3 29 29 H 1.08002 * 119.99868 * 359.97438 * 9 8 7 30 30 H 1.07997 * 120.00218 * 180.29066 * 10 9 8 31 31 H 1.08002 * 119.99692 * 179.77274 * 11 10 9 32 32 H 1.07999 * 119.99419 * 180.02562 * 12 11 10 33 33 H 1.08000 * 119.99824 * 179.97438 * 13 12 11 34 34 H 1.09001 * 113.61220 * 25.43215 * 14 7 6 35 35 H 1.08994 * 113.61498 * 156.25061 * 14 7 6 36 36 H 1.09001 * 113.61968 * 203.66762 * 18 7 6 37 37 H 1.09007 * 113.61482 * 334.57221 * 18 7 6 38 38 H 1.08005 * 126.45352 * 179.76439 * 19 3 2 39 39 H 1.07994 * 126.06873 * 179.97438 * 20 19 3 40 40 H 1.08992 * 109.46947 * 270.02689 * 22 21 20 41 41 H 0.96694 * 114.00134 * 299.99671 * 23 22 21 42 42 H 1.48502 * 109.99903 * 58.68101 * 24 22 21 43 43 H 1.48500 * 109.99782 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2679 1.1182 0.0000 4 6 1.8126 2.5124 -0.0005 5 8 2.6175 3.4154 -0.1332 6 7 0.5025 2.7936 0.1459 7 6 0.0353 4.1787 0.0489 8 6 0.2205 4.7636 -1.3276 9 6 0.1093 6.1280 -1.5194 10 6 0.2843 6.6652 -2.7810 11 6 0.5598 5.8367 -3.8528 12 6 0.6655 4.4717 -3.6619 13 6 0.4963 3.9352 -2.3993 14 6 0.5543 5.0844 1.1780 15 6 -0.6894 4.6649 1.9795 16 1 -0.5398 3.7672 2.5795 17 9 -1.2689 5.7121 2.7037 18 6 -1.3736 4.3954 0.6258 19 6 3.5780 0.6887 -0.0064 20 6 3.5522 -0.7094 -0.0043 21 6 2.2555 -1.1009 0.0037 22 6 1.7709 -2.5279 0.0091 23 8 0.5164 -2.6023 0.6895 24 14 3.0161 -3.6034 0.8830 25 1 -0.3633 0.1381 1.0184 26 1 -0.3633 0.8128 -0.6288 27 1 -0.3633 -0.9509 -0.3895 28 1 -0.1309 2.0787 0.3156 29 1 -0.1108 6.7748 -0.6829 30 1 0.2020 7.7317 -2.9301 31 1 0.6930 6.2560 -4.8392 32 1 0.8812 3.8246 -4.4992 33 1 0.5785 2.8687 -2.2503 34 1 1.4919 4.7423 1.6161 35 1 0.5705 6.1424 0.9166 36 1 -1.8850 5.2655 0.2142 37 1 -1.9914 3.4973 0.6184 38 1 4.4584 1.3143 -0.0117 39 1 4.4132 -1.3612 -0.0084 40 1 1.6487 -2.8739 -1.0172 41 1 0.5503 -2.3091 1.6102 42 1 3.2153 -3.1224 2.2738 43 1 2.5495 -5.0131 0.8956 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:38:10 Heat of formation + Delta-G solvation = 9.631416 kcal Electronic energy + Delta-G solvation = -29169.738320 eV Core-core repulsion = 25098.405231 eV Total energy + Delta-G solvation = -4071.333089 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -48.60230 -42.82405 -41.69751 -39.57062 -38.53116 -37.98535 -35.11780 -33.50788 -31.98854 -31.74701 -31.29450 -27.90367 -27.24369 -27.19371 -25.74185 -23.74424 -23.23824 -22.45150 -21.54249 -20.88640 -20.40104 -18.99983 -18.57664 -18.36385 -17.40712 -17.15716 -16.95631 -16.68593 -16.45539 -16.10449 -15.94969 -15.68188 -15.45602 -15.35320 -15.09490 -15.05351 -14.46510 -14.33171 -14.21095 -14.01527 -13.90188 -13.83380 -13.64846 -13.50790 -13.30833 -13.09110 -12.64123 -12.49692 -12.31186 -12.04088 -11.94411 -11.74827 -11.55017 -11.21995 -10.94792 -10.35406 -9.83243 -9.80654 -9.60346 -9.16435 -5.03720 0.32013 0.39866 0.51372 1.04675 1.47295 1.60076 1.69505 1.82316 1.93614 2.34070 2.72952 2.95594 3.02750 3.15933 3.32865 3.36571 3.44887 3.52102 3.62454 3.68142 3.82749 3.98475 4.04403 4.11642 4.19846 4.22977 4.29128 4.37232 4.38946 4.45854 4.46905 4.49461 4.60689 4.65450 4.84603 4.93903 5.02939 5.04382 5.11238 5.13039 5.27648 5.55297 5.59900 5.63901 5.68655 5.87598 5.97076 6.07732 6.08642 6.29006 7.08917 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.048 3.952 2 N -0.416 5.416 3 C -0.061 4.061 4 C 0.593 3.407 5 O -0.506 6.506 6 N -0.724 5.724 7 C 0.195 3.805 8 C -0.072 4.072 9 C -0.110 4.110 10 C -0.115 4.115 11 C -0.118 4.118 12 C -0.117 4.117 13 C -0.101 4.101 14 C -0.155 4.155 15 C 0.066 3.934 16 H 0.109 0.891 17 F -0.201 7.201 18 C -0.151 4.151 19 C -0.096 4.096 20 C -0.200 4.200 21 C 0.020 3.980 22 C -0.057 4.057 23 O -0.535 6.535 24 Si 0.717 3.283 25 H 0.079 0.921 26 H 0.083 0.917 27 H 0.114 0.886 28 H 0.399 0.601 29 H 0.124 0.876 30 H 0.125 0.875 31 H 0.123 0.877 32 H 0.121 0.879 33 H 0.112 0.888 34 H 0.093 0.907 35 H 0.109 0.891 36 H 0.115 0.885 37 H 0.087 0.913 38 H 0.153 0.847 39 H 0.155 0.845 40 H 0.125 0.875 41 H 0.377 0.623 42 H -0.257 1.257 43 H -0.254 1.254 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.548 -3.705 -0.988 4.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 N -0.093 5.093 3 C -0.172 4.172 4 C 0.381 3.619 5 O -0.380 6.380 6 N -0.381 5.381 7 C 0.108 3.892 8 C -0.073 4.073 9 C -0.129 4.129 10 C -0.133 4.133 11 C -0.136 4.136 12 C -0.135 4.135 13 C -0.119 4.119 14 C -0.193 4.193 15 C 0.030 3.970 16 H 0.126 0.874 17 F -0.182 7.182 18 C -0.189 4.189 19 C -0.122 4.122 20 C -0.224 4.224 21 C -0.096 4.096 22 C -0.166 4.166 23 O -0.341 6.341 24 Si 0.616 3.384 25 H 0.098 0.902 26 H 0.101 0.899 27 H 0.133 0.867 28 H 0.240 0.760 29 H 0.142 0.858 30 H 0.143 0.857 31 H 0.141 0.859 32 H 0.140 0.860 33 H 0.130 0.870 34 H 0.112 0.888 35 H 0.127 0.873 36 H 0.133 0.867 37 H 0.106 0.894 38 H 0.170 0.830 39 H 0.173 0.827 40 H 0.143 0.857 41 H 0.225 0.775 42 H -0.181 1.181 43 H -0.179 1.179 Dipole moment (debyes) X Y Z Total from point charges -1.441 -3.744 -0.971 4.127 hybrid contribution -1.259 0.195 0.668 1.439 sum -2.700 -3.548 -0.302 4.469 Atomic orbital electron populations 1.22496 0.77055 1.06250 1.03522 1.43869 1.06105 1.04953 1.54388 1.20442 0.91302 0.85779 1.19700 1.17019 0.81833 0.86741 0.76275 1.90897 1.53257 1.45793 1.48049 1.46165 1.08661 1.08121 1.75165 1.19630 0.95186 0.82110 0.92230 1.19504 1.00767 0.93754 0.93314 1.20927 1.00462 0.93918 0.97565 1.21144 0.99576 0.99993 0.92610 1.21212 0.99545 0.93688 0.99144 1.21139 0.99841 0.95483 0.96998 1.20829 0.99345 0.99292 0.92463 1.24057 0.98863 1.01524 0.94885 1.23157 0.94206 0.88974 0.90651 0.87370 1.92834 1.85606 1.59795 1.79946 1.24058 0.95195 1.04697 0.94990 1.21321 0.94718 0.94575 1.01610 1.20631 0.95008 0.95221 1.11543 1.21076 0.91062 0.88935 1.08574 1.24913 0.93480 0.94506 1.03674 1.86569 1.29937 1.88610 1.28971 0.94225 0.84850 0.77422 0.81926 0.90213 0.89872 0.86731 0.76048 0.85793 0.85699 0.85893 0.86049 0.87000 0.88815 0.87289 0.86690 0.89422 0.82977 0.82716 0.85721 0.77452 1.18078 1.17872 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.17 8.48 59.85 0.51 0.33 16 2 N -0.42 0.30 3.16 -115.62 -0.37 -0.07 16 3 C -0.06 -0.09 6.88 -81.98 -0.56 -0.66 16 4 C 0.59 1.40 6.12 -12.86 -0.08 1.32 16 5 O -0.51 -2.99 15.34 5.20 0.08 -2.91 16 6 N -0.72 0.38 3.97 -49.22 -0.20 0.19 16 7 C 0.20 0.01 0.93 -132.16 -0.12 -0.11 16 8 C -0.07 -0.12 4.73 -104.63 -0.49 -0.62 16 9 C -0.11 -0.16 8.76 -39.58 -0.35 -0.50 16 10 C -0.12 -0.15 10.05 -39.58 -0.40 -0.55 16 11 C -0.12 -0.17 10.05 -39.58 -0.40 -0.57 16 12 C -0.12 -0.22 10.05 -39.59 -0.40 -0.62 16 13 C -0.10 -0.23 8.80 -39.59 -0.35 -0.57 16 14 C -0.15 -0.11 6.66 -25.92 -0.17 -0.29 16 15 C 0.07 -0.03 5.58 -25.77 -0.14 -0.18 16 16 H 0.11 -0.20 8.14 -51.93 -0.42 -0.63 16 17 F -0.20 -0.44 17.41 2.25 0.04 -0.40 16 18 C -0.15 0.26 7.20 -25.78 -0.19 0.07 16 19 C -0.10 -0.15 10.66 -39.12 -0.42 -0.57 16 20 C -0.20 0.09 9.37 -39.98 -0.37 -0.28 16 21 C 0.02 -0.02 6.14 -81.95 -0.50 -0.52 16 22 C -0.06 0.13 2.87 36.01 0.10 0.24 16 23 O -0.53 1.09 10.21 -35.23 -0.36 0.73 16 24 Si 0.72 -1.84 31.10 -169.99 -5.29 -7.13 16 25 H 0.08 -0.42 7.99 -51.93 -0.42 -0.84 16 26 H 0.08 -0.35 6.23 -51.93 -0.32 -0.68 16 27 H 0.11 -0.40 6.31 -51.93 -0.33 -0.73 16 28 H 0.40 -1.19 4.63 -40.82 -0.19 -1.38 16 29 H 0.12 -0.02 6.49 -52.49 -0.34 -0.36 16 30 H 0.13 -0.07 8.06 -52.49 -0.42 -0.49 16 31 H 0.12 -0.04 8.06 -52.49 -0.42 -0.47 16 32 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 33 H 0.11 0.20 6.68 -52.49 -0.35 -0.15 16 34 H 0.09 0.22 7.25 -51.93 -0.38 -0.16 16 35 H 0.11 0.06 6.17 -51.93 -0.32 -0.26 16 36 H 0.11 -0.19 7.82 -51.93 -0.41 -0.59 16 37 H 0.09 -0.32 8.09 -51.92 -0.42 -0.74 16 38 H 0.15 0.21 8.06 -52.48 -0.42 -0.21 16 39 H 0.16 -0.48 6.85 -52.49 -0.36 -0.84 16 40 H 0.13 -0.38 7.96 -51.93 -0.41 -0.79 16 41 H 0.38 -1.60 8.70 45.56 0.40 -1.21 16 42 H -0.26 -0.05 7.11 56.52 0.40 0.36 16 43 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 LS Contribution 350.29 15.07 5.28 5.28 Total: 0.00 -8.35 350.29 -10.30 -18.65 By element: Atomic # 1 Polarization: -5.11 SS G_CDS: -5.16 Total: -10.27 kcal Atomic # 6 Polarization: 0.27 SS G_CDS: -4.33 Total: -4.07 kcal Atomic # 7 Polarization: 0.68 SS G_CDS: -0.56 Total: 0.12 kcal Atomic # 8 Polarization: -1.90 SS G_CDS: -0.28 Total: -2.18 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -1.84 SS G_CDS: -5.29 Total: -7.13 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -8.35 -10.30 -18.65 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.281 kcal (2) G-P(sol) polarization free energy of solvation -8.348 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.933 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.302 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.650 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.631 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds