Wall clock time and date at job start Sat Mar 6 2021 20:38:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37654 * 125.67913 * 2 1 4 4 C 1.46668 * 126.23510 * 359.97438 * 3 2 1 5 5 O 1.21691 * 120.00473 * 187.23618 * 4 3 2 6 6 N 1.34782 * 120.00001 * 7.23266 * 4 3 2 7 7 C 1.46502 * 120.00077 * 184.40713 * 6 4 3 8 8 C 1.50699 * 112.84744 * 65.43133 * 7 6 4 9 9 C 1.38232 * 119.99920 * 194.12730 * 8 7 6 10 10 C 1.38237 * 120.00187 * 179.74478 * 9 8 7 11 11 C 1.38241 * 119.99453 * 0.53155 * 10 9 8 12 12 C 1.38234 * 119.99990 * 359.74079 * 11 10 9 13 13 C 1.38226 * 120.00112 * 359.97438 * 12 11 10 14 14 C 1.53775 * 113.61773 * 294.23385 * 7 6 4 15 15 C 1.53789 * 87.08041 * 270.88373 * 14 7 6 16 16 H 1.09006 * 113.60824 * 89.11743 * 15 14 7 17 17 F 1.39897 * 113.61422 * 219.93155 * 15 14 7 18 18 C 1.53779 * 113.61445 * 196.62357 * 7 6 4 19 19 C 1.37870 * 107.53032 * 180.27924 * 3 2 1 20 20 C 1.39838 * 107.09050 * 359.74420 * 19 3 2 21 21 C 1.35446 * 107.86031 * 359.97438 * 20 19 3 22 22 C 1.50706 * 125.56194 * 180.02562 * 21 20 19 23 23 O 1.42907 * 109.46872 * 150.02789 * 22 21 20 24 24 Si 1.86303 * 109.47024 * 30.02987 * 22 21 20 25 25 H 1.09004 * 109.46893 * 277.72414 * 1 2 3 26 26 H 1.09001 * 109.46958 * 37.72570 * 1 2 3 27 27 H 1.08994 * 109.46881 * 157.72570 * 1 2 3 28 28 H 0.97006 * 119.99745 * 4.41307 * 6 4 3 29 29 H 1.08002 * 119.99868 * 359.97438 * 9 8 7 30 30 H 1.07997 * 120.00218 * 180.29066 * 10 9 8 31 31 H 1.08002 * 119.99692 * 179.77274 * 11 10 9 32 32 H 1.07999 * 119.99419 * 180.02562 * 12 11 10 33 33 H 1.08000 * 119.99824 * 179.97438 * 13 12 11 34 34 H 1.09001 * 113.61220 * 25.43215 * 14 7 6 35 35 H 1.08994 * 113.61498 * 156.25061 * 14 7 6 36 36 H 1.09001 * 113.61968 * 203.66762 * 18 7 6 37 37 H 1.09007 * 113.61482 * 334.57221 * 18 7 6 38 38 H 1.08005 * 126.45352 * 179.76439 * 19 3 2 39 39 H 1.07994 * 126.06873 * 179.97438 * 20 19 3 40 40 H 1.08992 * 109.46947 * 270.02689 * 22 21 20 41 41 H 0.96694 * 114.00134 * 299.99671 * 23 22 21 42 42 H 1.48502 * 109.99903 * 58.68101 * 24 22 21 43 43 H 1.48500 * 109.99782 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2679 1.1182 0.0000 4 6 1.8126 2.5124 -0.0005 5 8 2.6175 3.4154 -0.1332 6 7 0.5025 2.7936 0.1459 7 6 0.0353 4.1787 0.0489 8 6 0.2205 4.7636 -1.3276 9 6 0.1093 6.1280 -1.5194 10 6 0.2843 6.6652 -2.7810 11 6 0.5598 5.8367 -3.8528 12 6 0.6655 4.4717 -3.6619 13 6 0.4963 3.9352 -2.3993 14 6 0.5543 5.0844 1.1780 15 6 -0.6894 4.6649 1.9795 16 1 -0.5398 3.7672 2.5795 17 9 -1.2689 5.7121 2.7037 18 6 -1.3736 4.3954 0.6258 19 6 3.5780 0.6887 -0.0064 20 6 3.5522 -0.7094 -0.0043 21 6 2.2555 -1.1009 0.0037 22 6 1.7709 -2.5279 0.0091 23 8 0.5164 -2.6023 0.6895 24 14 3.0161 -3.6034 0.8830 25 1 -0.3633 0.1381 1.0184 26 1 -0.3633 0.8128 -0.6288 27 1 -0.3633 -0.9509 -0.3895 28 1 -0.1309 2.0787 0.3156 29 1 -0.1108 6.7748 -0.6829 30 1 0.2020 7.7317 -2.9301 31 1 0.6930 6.2560 -4.8392 32 1 0.8812 3.8246 -4.4992 33 1 0.5785 2.8687 -2.2503 34 1 1.4919 4.7423 1.6161 35 1 0.5705 6.1424 0.9166 36 1 -1.8850 5.2655 0.2142 37 1 -1.9914 3.4973 0.6184 38 1 4.4584 1.3143 -0.0117 39 1 4.4132 -1.3612 -0.0084 40 1 1.6487 -2.8739 -1.0172 41 1 0.5503 -2.3091 1.6102 42 1 3.2153 -3.1224 2.2738 43 1 2.5495 -5.0131 0.8956 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:38:09 Heat of formation + Delta-G solvation = 13.345099 kcal Electronic energy + Delta-G solvation = -29169.577283 eV Core-core repulsion = 25098.405231 eV Total energy + Delta-G solvation = -4071.172052 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -48.68220 -42.80559 -41.71706 -39.68109 -38.58478 -37.85221 -35.11995 -33.47458 -32.04262 -31.81669 -31.25802 -27.76716 -27.20413 -27.13676 -25.73009 -23.78879 -23.29632 -22.48812 -21.53066 -20.83794 -20.42681 -18.92496 -18.62200 -18.28570 -17.40739 -17.11247 -16.94326 -16.73101 -16.44089 -16.11539 -15.94666 -15.73509 -15.47309 -15.31997 -15.13140 -14.92801 -14.48417 -14.33047 -14.16752 -14.06604 -13.96187 -13.76423 -13.59830 -13.40910 -13.29776 -12.97280 -12.67390 -12.42921 -12.34717 -12.02208 -11.97228 -11.76461 -11.56256 -11.30664 -10.89010 -10.43663 -9.90555 -9.77671 -9.67917 -9.14902 -4.85020 0.28344 0.31788 0.41386 1.18633 1.53535 1.72040 1.77492 1.84151 2.06333 2.24809 2.67441 3.07098 3.15707 3.19310 3.35019 3.41629 3.49983 3.65258 3.71820 3.75935 3.95370 3.98366 4.10086 4.17748 4.19170 4.36274 4.43104 4.44152 4.51547 4.53460 4.54274 4.56560 4.62335 4.66123 4.77607 4.92202 4.97766 5.02606 5.07219 5.18678 5.25148 5.47755 5.54962 5.58889 5.65523 5.87222 6.01065 6.08539 6.29718 6.35163 7.00189 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.040 3.960 2 N -0.412 5.412 3 C -0.080 4.080 4 C 0.594 3.406 5 O -0.551 6.551 6 N -0.707 5.707 7 C 0.193 3.807 8 C -0.080 4.080 9 C -0.122 4.122 10 C -0.124 4.124 11 C -0.129 4.129 12 C -0.130 4.130 13 C -0.116 4.116 14 C -0.161 4.161 15 C 0.067 3.933 16 H 0.125 0.875 17 F -0.216 7.216 18 C -0.138 4.138 19 C -0.119 4.119 20 C -0.206 4.206 21 C 0.024 3.976 22 C -0.054 4.054 23 O -0.542 6.542 24 Si 0.795 3.205 25 H 0.101 0.899 26 H 0.089 0.911 27 H 0.119 0.881 28 H 0.412 0.588 29 H 0.135 0.865 30 H 0.142 0.858 31 H 0.139 0.861 32 H 0.132 0.868 33 H 0.112 0.888 34 H 0.073 0.927 35 H 0.106 0.894 36 H 0.116 0.884 37 H 0.115 0.885 38 H 0.143 0.857 39 H 0.178 0.822 40 H 0.138 0.862 41 H 0.387 0.613 42 H -0.293 1.293 43 H -0.295 1.295 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.834 -4.583 -1.152 5.510 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 N -0.088 5.088 3 C -0.192 4.192 4 C 0.383 3.617 5 O -0.428 6.428 6 N -0.365 5.365 7 C 0.106 3.894 8 C -0.081 4.081 9 C -0.140 4.140 10 C -0.142 4.142 11 C -0.147 4.147 12 C -0.148 4.148 13 C -0.134 4.134 14 C -0.200 4.200 15 C 0.032 3.968 16 H 0.143 0.857 17 F -0.197 7.197 18 C -0.176 4.176 19 C -0.146 4.146 20 C -0.230 4.230 21 C -0.094 4.094 22 C -0.163 4.163 23 O -0.349 6.349 24 Si 0.698 3.302 25 H 0.120 0.880 26 H 0.108 0.892 27 H 0.137 0.863 28 H 0.255 0.745 29 H 0.153 0.847 30 H 0.159 0.841 31 H 0.157 0.843 32 H 0.149 0.851 33 H 0.130 0.870 34 H 0.092 0.908 35 H 0.124 0.876 36 H 0.135 0.865 37 H 0.133 0.867 38 H 0.160 0.840 39 H 0.196 0.804 40 H 0.156 0.844 41 H 0.237 0.763 42 H -0.220 1.220 43 H -0.222 1.222 Dipole moment (debyes) X Y Z Total from point charges -2.774 -4.625 -1.139 5.512 hybrid contribution -0.853 0.431 0.750 1.215 sum -3.627 -4.194 -0.389 5.559 Atomic orbital electron populations 1.22745 0.75344 1.06810 1.05140 1.44015 1.07121 1.04228 1.53426 1.20352 0.91801 0.85967 1.21051 1.17166 0.82226 0.86705 0.75557 1.90867 1.54537 1.47052 1.50385 1.46014 1.08019 1.08444 1.73997 1.19659 0.96416 0.82004 0.91299 1.19709 1.00505 0.94026 0.93893 1.21158 1.00561 0.94125 0.98145 1.21439 0.99173 1.00981 0.92574 1.21472 0.99478 0.93655 1.00054 1.21378 0.99985 0.96091 0.97351 1.20948 1.00060 0.99475 0.92949 1.24065 0.98642 1.01584 0.95694 1.23306 0.93479 0.88832 0.91225 0.85723 1.92803 1.85787 1.60726 1.80377 1.24015 0.94281 1.05981 0.93290 1.21472 0.94781 0.95738 1.02602 1.20946 0.96218 0.94589 1.11209 1.21357 0.91025 0.89512 1.07522 1.25007 0.93462 0.93322 1.04530 1.86555 1.29923 1.88603 1.29866 0.93232 0.83646 0.73936 0.79374 0.88033 0.89227 0.86266 0.74484 0.84716 0.84061 0.84349 0.85052 0.87045 0.90840 0.87573 0.86522 0.86711 0.83963 0.80443 0.84422 0.76319 1.21986 1.22219 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.34 8.48 127.77 1.08 0.74 16 2 N -0.41 0.79 3.16 -519.71 -1.64 -0.86 16 3 C -0.08 -0.31 6.88 40.34 0.28 -0.03 16 4 C 0.59 3.56 6.12 86.44 0.53 4.09 16 5 O -0.55 -7.84 15.34 -4.32 -0.07 -7.90 16 6 N -0.71 0.64 3.97 -427.85 -1.70 -1.06 16 7 C 0.19 0.07 0.93 3.38 0.00 0.08 16 8 C -0.08 -0.33 4.73 -19.87 -0.09 -0.43 16 9 C -0.12 -0.42 8.76 22.27 0.20 -0.22 16 10 C -0.12 -0.36 10.05 22.27 0.22 -0.14 16 11 C -0.13 -0.43 10.05 22.27 0.22 -0.20 16 12 C -0.13 -0.60 10.05 22.27 0.22 -0.37 16 13 C -0.12 -0.62 8.80 22.27 0.20 -0.43 16 14 C -0.16 -0.40 6.66 31.12 0.21 -0.20 16 15 C 0.07 -0.09 5.58 31.21 0.17 0.09 16 16 H 0.13 -0.59 8.14 -2.38 -0.02 -0.61 16 17 F -0.22 -0.93 17.41 44.97 0.78 -0.15 16 18 C -0.14 0.61 7.20 31.21 0.22 0.84 16 19 C -0.12 -0.53 10.66 22.57 0.24 -0.29 16 20 C -0.21 0.19 9.37 22.01 0.21 0.40 16 21 C 0.02 -0.06 6.14 41.34 0.25 0.20 16 22 C -0.05 0.32 2.87 71.24 0.20 0.53 16 23 O -0.54 3.02 10.21 -148.98 -1.52 1.50 16 24 Si 0.79 -4.43 31.10 68.60 2.13 -2.30 16 25 H 0.10 -1.29 7.99 -2.38 -0.02 -1.31 16 26 H 0.09 -0.88 6.23 -2.39 -0.01 -0.89 16 27 H 0.12 -1.05 6.31 -2.39 -0.02 -1.07 16 28 H 0.41 -2.83 4.63 -92.70 -0.43 -3.26 16 29 H 0.14 0.04 6.49 -2.91 -0.02 0.02 16 30 H 0.14 -0.18 8.06 -2.91 -0.02 -0.20 16 31 H 0.14 -0.10 8.06 -2.91 -0.02 -0.12 16 32 H 0.13 0.18 8.06 -2.91 -0.02 0.16 16 33 H 0.11 0.50 6.68 -2.91 -0.02 0.48 16 34 H 0.07 0.49 7.25 -2.39 -0.02 0.48 16 35 H 0.11 0.27 6.17 -2.39 -0.01 0.26 16 36 H 0.12 -0.49 7.82 -2.39 -0.02 -0.51 16 37 H 0.11 -1.11 8.09 -2.38 -0.02 -1.13 16 38 H 0.14 0.77 8.06 -2.91 -0.02 0.74 16 39 H 0.18 -1.22 6.85 -2.91 -0.02 -1.24 16 40 H 0.14 -1.11 7.96 -2.39 -0.02 -1.12 16 41 H 0.39 -3.84 8.70 -74.06 -0.64 -4.49 16 42 H -0.29 -0.18 7.11 99.48 0.71 0.52 16 43 H -0.29 -0.41 7.11 99.48 0.71 0.30 16 Total: 0.00 -21.51 350.29 2.39 -19.12 By element: Atomic # 1 Polarization: -13.03 SS G_CDS: 0.03 Total: -13.00 kcal Atomic # 6 Polarization: 0.28 SS G_CDS: 4.37 Total: 4.65 kcal Atomic # 7 Polarization: 1.43 SS G_CDS: -3.34 Total: -1.91 kcal Atomic # 8 Polarization: -4.82 SS G_CDS: -1.59 Total: -6.41 kcal Atomic # 9 Polarization: -0.93 SS G_CDS: 0.78 Total: -0.15 kcal Atomic # 14 Polarization: -4.43 SS G_CDS: 2.13 Total: -2.30 kcal Total: -21.51 2.39 -19.12 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.460 kcal (2) G-P(sol) polarization free energy of solvation -21.507 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.953 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.392 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.115 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.345 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds