Wall clock time and date at job start Sat Mar 6 2021 20:38:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 C 1.35451 * 125.56409 * 2 1 4 4 C 1.50698 * 126.06696 * 0.02562 * 3 2 1 5 5 O 1.42895 * 109.47307 * 247.99812 * 4 3 2 6 6 Si 1.86308 * 109.47159 * 127.99585 * 4 3 2 7 7 C 1.39830 * 107.86276 * 180.28352 * 3 2 1 8 8 C 1.50708 * 126.45336 * 179.74163 * 7 3 2 9 9 C 1.37865 * 107.08946 * 359.57995 * 7 3 2 10 10 C 1.46675 * 126.23803 * 180.11663 * 9 7 3 11 11 O 1.21702 * 119.99780 * 0.33669 * 10 9 7 12 12 N 1.34777 * 120.00486 * 180.33053 * 10 9 7 13 13 C 1.46497 * 120.00379 * 174.97534 * 12 10 9 14 14 C 1.50703 * 112.85085 * 71.40344 * 13 12 10 15 15 C 1.38233 * 119.99934 * 191.01444 * 14 13 12 16 16 C 1.38231 * 119.99925 * 179.78894 * 15 14 13 17 17 C 1.38240 * 119.99789 * 0.45948 * 16 15 14 18 18 C 1.38233 * 120.00026 * 359.77503 * 17 16 15 19 19 C 1.38231 * 120.00030 * 0.02562 * 18 17 16 20 20 C 1.53785 * 113.61157 * 300.20785 * 13 12 10 21 21 C 1.53780 * 87.08111 * 270.88117 * 20 13 12 22 22 H 1.09005 * 113.61050 * 89.20091 * 21 20 13 23 23 F 1.39895 * 113.61493 * 220.01932 * 21 20 13 24 24 C 1.53780 * 87.08394 * 334.57226 * 21 20 13 25 25 N 1.35528 * 125.56324 * 180.02562 * 2 1 3 26 26 H 1.09000 * 109.46882 * 92.55865 * 1 2 3 27 27 H 1.08994 * 109.46952 * 212.55452 * 1 2 3 28 28 H 1.08998 * 109.47088 * 332.55336 * 1 2 3 29 29 H 1.09004 * 109.47429 * 7.99847 * 4 3 2 30 30 H 0.96704 * 113.99909 * 299.99717 * 5 4 3 31 31 H 1.48495 * 109.99893 * 184.82060 * 6 4 3 32 32 H 1.48502 * 109.99882 * 306.13999 * 6 4 3 33 33 H 1.08996 * 109.47143 * 90.00703 * 8 7 3 34 34 H 1.08999 * 109.46765 * 210.00126 * 8 7 3 35 35 H 1.08998 * 109.47401 * 330.00239 * 8 7 3 36 36 H 0.96999 * 119.99615 * 354.97497 * 12 10 9 37 37 H 1.08002 * 120.00290 * 0.02562 * 15 14 13 38 38 H 1.08000 * 120.00388 * 180.25294 * 16 15 14 39 39 H 1.08000 * 119.99611 * 179.79158 * 17 16 15 40 40 H 1.08003 * 119.99841 * 180.02562 * 18 17 16 41 41 H 1.08007 * 120.00148 * 179.97438 * 19 18 17 42 42 H 1.09002 * 113.61560 * 25.43241 * 20 13 12 43 43 H 1.09000 * 113.61222 * 156.25539 * 20 13 12 44 44 H 1.09001 * 113.61217 * 270.88479 * 24 21 20 45 45 H 1.08993 * 113.61920 * 139.98032 * 24 21 20 46 46 H 0.97004 * 125.68261 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2949 1.1018 0.0000 4 6 1.8200 2.5320 0.0005 5 8 2.1484 3.1435 -1.2485 6 14 2.6510 3.4618 1.3847 7 6 3.6270 0.6767 -0.0066 8 6 4.8486 1.5592 -0.0144 9 6 3.6123 -0.7019 -0.0008 10 6 4.7860 -1.5815 -0.0022 11 8 5.9050 -1.1030 -0.0027 12 7 4.6254 -2.9197 -0.0027 13 6 5.7928 -3.7975 -0.1151 14 6 6.6393 -3.8081 1.1316 15 6 7.8887 -4.3993 1.1137 16 6 8.6670 -4.4052 2.2561 17 6 8.1919 -3.8282 3.4190 18 6 6.9405 -3.2412 3.4382 19 6 6.1640 -3.2318 2.2947 20 6 6.6006 -3.5858 -1.4065 21 6 5.6833 -4.6336 -2.0588 22 1 4.7854 -4.2088 -2.5078 23 9 6.3559 -5.5116 -2.9155 24 6 5.4590 -5.2012 -0.6473 25 7 2.2953 -1.1025 -0.0005 26 1 -0.3633 -0.0459 -1.0266 27 1 -0.3633 -0.8662 0.5530 28 1 -0.3633 0.9120 0.4737 29 1 0.7397 2.5562 0.1439 30 1 3.0957 3.1575 -1.4426 31 1 2.1058 4.8405 1.4695 32 1 2.4398 2.7520 2.6719 33 1 5.1487 1.7734 1.0113 34 1 5.6614 1.0498 -0.5320 35 1 4.6192 2.4927 -0.5283 36 1 3.7368 -3.3014 0.0714 37 1 8.2584 -4.8533 0.2062 38 1 9.6448 -4.8634 2.2411 39 1 8.7987 -3.8357 4.3125 40 1 6.5696 -2.7901 4.3467 41 1 5.1860 -2.7736 2.3098 42 1 6.4932 -2.5872 -1.8300 43 1 7.6406 -3.9027 -1.3278 44 1 6.1865 -5.9609 -0.3615 45 1 4.4300 -5.5067 -0.4579 46 1 1.9834 -2.0210 -0.0006 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:38:16 Heat of formation + Delta-G solvation = -14.126738 kcal Electronic energy + Delta-G solvation = -31062.624430 eV Core-core repulsion = 26834.723491 eV Total energy + Delta-G solvation = -4227.900939 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.153 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -48.61267 -42.80391 -41.73969 -39.58588 -38.49071 -37.71823 -34.66769 -33.77704 -32.89385 -31.91100 -31.69768 -29.33826 -27.76230 -27.25692 -26.59469 -25.58859 -23.61137 -22.88438 -22.38366 -21.06820 -20.50366 -20.09970 -19.46512 -18.61486 -17.66093 -17.41124 -17.08885 -16.72591 -16.65652 -16.48442 -15.91986 -15.90103 -15.63021 -15.31874 -15.25110 -15.14653 -14.68130 -14.38160 -14.33835 -14.16753 -14.02146 -13.92860 -13.87482 -13.73001 -13.67538 -13.38083 -13.30531 -13.19528 -12.71550 -12.63100 -12.32623 -12.24708 -11.94666 -11.86857 -11.79194 -11.53847 -10.95568 -10.49970 -10.38047 -9.80693 -9.60648 -9.59720 -9.05417 -4.88602 0.33814 0.39556 0.51414 1.23839 1.57755 1.74691 1.80791 1.90786 2.09441 2.27572 2.72077 3.03471 3.14854 3.35548 3.42094 3.59878 3.62467 3.68372 3.72098 3.92258 3.98239 4.01561 4.04944 4.12376 4.23015 4.24931 4.34714 4.38605 4.43592 4.45044 4.46894 4.52649 4.60051 4.65022 4.74265 4.80908 4.87820 4.92501 4.95176 5.03352 5.10348 5.12621 5.24882 5.33380 5.55588 5.61968 5.64094 5.69403 5.84705 6.07588 6.17428 6.33605 6.68481 7.06192 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.082 3.918 3 C -0.208 4.208 4 C -0.028 4.028 5 O -0.541 6.541 6 Si 0.678 3.322 7 C -0.055 4.055 8 C -0.100 4.100 9 C -0.062 4.062 10 C 0.594 3.406 11 O -0.502 6.502 12 N -0.719 5.719 13 C 0.199 3.801 14 C -0.073 4.073 15 C -0.111 4.111 16 C -0.116 4.116 17 C -0.118 4.118 18 C -0.118 4.118 19 C -0.098 4.098 20 C -0.153 4.153 21 C 0.066 3.934 22 H 0.109 0.891 23 F -0.202 7.202 24 C -0.152 4.152 25 N -0.538 5.538 26 H 0.082 0.918 27 H 0.070 0.930 28 H 0.085 0.915 29 H 0.109 0.891 30 H 0.375 0.625 31 H -0.254 1.254 32 H -0.258 1.258 33 H 0.078 0.922 34 H 0.091 0.909 35 H 0.066 0.934 36 H 0.397 0.603 37 H 0.123 0.877 38 H 0.124 0.876 39 H 0.122 0.878 40 H 0.121 0.879 41 H 0.114 0.886 42 H 0.093 0.907 43 H 0.109 0.891 44 H 0.114 0.886 45 H 0.088 0.912 46 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.202 -2.469 1.147 3.501 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.036 4.036 3 C -0.215 4.215 4 C -0.140 4.140 5 O -0.347 6.347 6 Si 0.579 3.421 7 C -0.064 4.064 8 C -0.156 4.156 9 C -0.173 4.173 10 C 0.382 3.618 11 O -0.376 6.376 12 N -0.371 5.371 13 C 0.112 3.888 14 C -0.074 4.074 15 C -0.130 4.130 16 C -0.134 4.134 17 C -0.136 4.136 18 C -0.136 4.136 19 C -0.116 4.116 20 C -0.191 4.191 21 C 0.030 3.970 22 H 0.127 0.873 23 F -0.182 7.182 24 C -0.190 4.190 25 N -0.135 5.135 26 H 0.100 0.900 27 H 0.089 0.911 28 H 0.104 0.896 29 H 0.126 0.874 30 H 0.223 0.777 31 H -0.179 1.179 32 H -0.183 1.183 33 H 0.097 0.903 34 H 0.110 0.890 35 H 0.085 0.915 36 H 0.231 0.769 37 H 0.141 0.859 38 H 0.142 0.858 39 H 0.140 0.860 40 H 0.139 0.861 41 H 0.132 0.868 42 H 0.112 0.888 43 H 0.127 0.873 44 H 0.132 0.868 45 H 0.106 0.894 46 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges -2.110 -1.800 1.845 3.331 hybrid contribution -1.206 -1.243 -0.063 1.733 sum -3.316 -3.044 1.781 4.841 Atomic orbital electron populations 1.20503 0.87420 1.03885 1.03568 1.20311 0.93591 0.85568 1.04153 1.19511 0.92586 0.95140 1.14249 1.24289 1.03312 0.91273 0.95140 1.86502 1.29742 1.80733 1.37764 0.94620 0.91154 0.79172 0.77107 1.19746 0.94596 0.91170 1.00859 1.20444 0.94690 0.97396 1.03099 1.19982 0.82644 0.93901 1.20816 1.16967 0.87716 0.80812 0.76288 1.90878 1.23796 1.74625 1.48325 1.45575 1.08944 1.05622 1.76995 1.19598 0.86128 0.90347 0.92720 1.19531 0.94830 0.99279 0.93781 1.20915 0.93572 0.99847 0.98622 1.21135 0.99786 0.99615 0.92866 1.21207 0.96038 0.98055 0.98298 1.21146 0.94755 0.99456 0.98216 1.20841 0.99724 0.98664 0.92403 1.24035 1.00162 1.00991 0.93945 1.23111 0.96157 0.89856 0.87853 0.87330 1.92835 1.81946 1.70743 1.72703 1.24013 1.04555 0.95868 0.94546 1.41818 1.05415 1.08307 1.57983 0.89979 0.91098 0.89650 0.87402 0.77687 1.17906 1.18257 0.90343 0.89024 0.91517 0.76851 0.85880 0.85760 0.85960 0.86112 0.86831 0.88796 0.87272 0.86783 0.89375 0.74795 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.27 10.15 36.01 0.37 0.64 16 2 C 0.08 -0.06 7.13 -81.95 -0.58 -0.64 16 3 C -0.21 -0.12 4.71 -105.02 -0.49 -0.62 16 4 C -0.03 -0.01 2.85 36.00 0.10 0.09 16 5 O -0.54 -0.61 12.88 -35.23 -0.45 -1.06 16 6 Si 0.68 0.23 29.61 -169.99 -5.03 -4.81 16 7 C -0.06 -0.05 5.84 -104.16 -0.61 -0.65 16 8 C -0.10 0.04 7.98 36.01 0.29 0.33 16 9 C -0.06 -0.02 7.05 -81.98 -0.58 -0.60 16 10 C 0.59 0.45 6.27 -12.85 -0.08 0.37 16 11 O -0.50 -1.89 13.18 5.19 0.07 -1.82 16 12 N -0.72 1.34 4.19 -49.21 -0.21 1.13 16 13 C 0.20 -0.17 0.94 -132.16 -0.12 -0.30 16 14 C -0.07 -0.07 4.83 -104.62 -0.51 -0.57 16 15 C -0.11 -0.09 8.60 -39.59 -0.34 -0.43 16 16 C -0.12 -0.10 10.05 -39.58 -0.40 -0.49 16 17 C -0.12 -0.12 10.05 -39.58 -0.40 -0.52 16 18 C -0.12 -0.17 10.05 -39.59 -0.40 -0.56 16 19 C -0.10 -0.15 8.86 -39.58 -0.35 -0.50 16 20 C -0.15 0.01 6.63 -25.92 -0.17 -0.16 16 21 C 0.07 -0.07 5.58 -25.92 -0.14 -0.21 16 22 H 0.11 -0.26 8.14 -51.93 -0.42 -0.68 16 23 F -0.20 -0.38 17.41 2.25 0.04 -0.34 16 24 C -0.15 0.35 7.19 -25.92 -0.19 0.16 16 25 N -0.54 1.06 5.99 -5.70 -0.03 1.02 16 26 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 27 H 0.07 -0.30 8.14 -51.93 -0.42 -0.73 16 28 H 0.08 -0.25 6.89 -51.93 -0.36 -0.61 16 29 H 0.11 0.01 6.47 -51.93 -0.34 -0.33 16 30 H 0.38 -0.75 6.86 45.56 0.31 -0.44 16 31 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 32 H -0.26 -0.78 7.11 56.52 0.40 -0.38 16 33 H 0.08 -0.07 7.66 -51.93 -0.40 -0.46 16 34 H 0.09 0.10 6.50 -51.93 -0.34 -0.24 16 35 H 0.07 -0.19 5.28 -51.93 -0.27 -0.47 16 36 H 0.40 -1.85 7.85 -40.82 -0.32 -2.17 16 37 H 0.12 -0.08 6.68 -52.49 -0.35 -0.43 16 38 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 39 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 40 H 0.12 0.00 8.06 -52.48 -0.42 -0.42 16 41 H 0.11 0.12 6.70 -52.48 -0.35 -0.23 16 42 H 0.09 0.13 7.05 -51.93 -0.37 -0.24 16 43 H 0.11 0.00 6.32 -51.93 -0.33 -0.33 16 44 H 0.11 -0.23 7.72 -51.93 -0.40 -0.63 16 45 H 0.09 -0.36 8.11 -51.93 -0.42 -0.78 16 46 H 0.41 -2.13 8.20 -40.82 -0.33 -2.46 16 LS Contribution 369.13 15.07 5.56 5.56 Total: 0.00 -8.44 369.13 -10.66 -19.10 By element: Atomic # 1 Polarization: -8.12 SS G_CDS: -6.00 Total: -14.12 kcal Atomic # 6 Polarization: -0.06 SS G_CDS: -4.61 Total: -4.67 kcal Atomic # 7 Polarization: 2.40 SS G_CDS: -0.24 Total: 2.16 kcal Atomic # 8 Polarization: -2.50 SS G_CDS: -0.39 Total: -2.89 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.04 Total: -0.34 kcal Atomic # 14 Polarization: 0.23 SS G_CDS: -5.03 Total: -4.81 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -8.44 -10.66 -19.10 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.973 kcal (2) G-P(sol) polarization free energy of solvation -8.437 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.464 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.663 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.099 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.127 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds