Wall clock time and date at job start Sat Mar 6 2021 20:38:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 C 1.35451 * 125.56409 * 2 1 4 4 C 1.50698 * 126.06696 * 0.02562 * 3 2 1 5 5 O 1.42895 * 109.47307 * 247.99812 * 4 3 2 6 6 Si 1.86308 * 109.47159 * 127.99585 * 4 3 2 7 7 C 1.39830 * 107.86276 * 180.28352 * 3 2 1 8 8 C 1.50708 * 126.45336 * 179.74163 * 7 3 2 9 9 C 1.37865 * 107.08946 * 359.57995 * 7 3 2 10 10 C 1.46675 * 126.23803 * 180.11663 * 9 7 3 11 11 O 1.21702 * 119.99780 * 0.33669 * 10 9 7 12 12 N 1.34777 * 120.00486 * 180.33053 * 10 9 7 13 13 C 1.46497 * 120.00379 * 174.97534 * 12 10 9 14 14 C 1.50703 * 112.85085 * 71.40344 * 13 12 10 15 15 C 1.38233 * 119.99934 * 191.01444 * 14 13 12 16 16 C 1.38231 * 119.99925 * 179.78894 * 15 14 13 17 17 C 1.38240 * 119.99789 * 0.45948 * 16 15 14 18 18 C 1.38233 * 120.00026 * 359.77503 * 17 16 15 19 19 C 1.38231 * 120.00030 * 0.02562 * 18 17 16 20 20 C 1.53785 * 113.61157 * 300.20785 * 13 12 10 21 21 C 1.53780 * 87.08111 * 270.88117 * 20 13 12 22 22 H 1.09005 * 113.61050 * 89.20091 * 21 20 13 23 23 F 1.39895 * 113.61493 * 220.01932 * 21 20 13 24 24 C 1.53780 * 87.08394 * 334.57226 * 21 20 13 25 25 N 1.35528 * 125.56324 * 180.02562 * 2 1 3 26 26 H 1.09000 * 109.46882 * 92.55865 * 1 2 3 27 27 H 1.08994 * 109.46952 * 212.55452 * 1 2 3 28 28 H 1.08998 * 109.47088 * 332.55336 * 1 2 3 29 29 H 1.09004 * 109.47429 * 7.99847 * 4 3 2 30 30 H 0.96704 * 113.99909 * 299.99717 * 5 4 3 31 31 H 1.48495 * 109.99893 * 184.82060 * 6 4 3 32 32 H 1.48502 * 109.99882 * 306.13999 * 6 4 3 33 33 H 1.08996 * 109.47143 * 90.00703 * 8 7 3 34 34 H 1.08999 * 109.46765 * 210.00126 * 8 7 3 35 35 H 1.08998 * 109.47401 * 330.00239 * 8 7 3 36 36 H 0.96999 * 119.99615 * 354.97497 * 12 10 9 37 37 H 1.08002 * 120.00290 * 0.02562 * 15 14 13 38 38 H 1.08000 * 120.00388 * 180.25294 * 16 15 14 39 39 H 1.08000 * 119.99611 * 179.79158 * 17 16 15 40 40 H 1.08003 * 119.99841 * 180.02562 * 18 17 16 41 41 H 1.08007 * 120.00148 * 179.97438 * 19 18 17 42 42 H 1.09002 * 113.61560 * 25.43241 * 20 13 12 43 43 H 1.09000 * 113.61222 * 156.25539 * 20 13 12 44 44 H 1.09001 * 113.61217 * 270.88479 * 24 21 20 45 45 H 1.08993 * 113.61920 * 139.98032 * 24 21 20 46 46 H 0.97004 * 125.68261 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2949 1.1018 0.0000 4 6 1.8200 2.5320 0.0005 5 8 2.1484 3.1435 -1.2485 6 14 2.6510 3.4618 1.3847 7 6 3.6270 0.6767 -0.0066 8 6 4.8486 1.5592 -0.0144 9 6 3.6123 -0.7019 -0.0008 10 6 4.7860 -1.5815 -0.0022 11 8 5.9050 -1.1030 -0.0027 12 7 4.6254 -2.9197 -0.0027 13 6 5.7928 -3.7975 -0.1151 14 6 6.6393 -3.8081 1.1316 15 6 7.8887 -4.3993 1.1137 16 6 8.6670 -4.4052 2.2561 17 6 8.1919 -3.8282 3.4190 18 6 6.9405 -3.2412 3.4382 19 6 6.1640 -3.2318 2.2947 20 6 6.6006 -3.5858 -1.4065 21 6 5.6833 -4.6336 -2.0588 22 1 4.7854 -4.2088 -2.5078 23 9 6.3559 -5.5116 -2.9155 24 6 5.4590 -5.2012 -0.6473 25 7 2.2953 -1.1025 -0.0005 26 1 -0.3633 -0.0459 -1.0266 27 1 -0.3633 -0.8662 0.5530 28 1 -0.3633 0.9120 0.4737 29 1 0.7397 2.5562 0.1439 30 1 3.0957 3.1575 -1.4426 31 1 2.1058 4.8405 1.4695 32 1 2.4398 2.7520 2.6719 33 1 5.1487 1.7734 1.0113 34 1 5.6614 1.0498 -0.5320 35 1 4.6192 2.4927 -0.5283 36 1 3.7368 -3.3014 0.0714 37 1 8.2584 -4.8533 0.2062 38 1 9.6448 -4.8634 2.2411 39 1 8.7987 -3.8357 4.3125 40 1 6.5696 -2.7901 4.3467 41 1 5.1860 -2.7736 2.3098 42 1 6.4932 -2.5872 -1.8300 43 1 7.6406 -3.9027 -1.3278 44 1 6.1865 -5.9609 -0.3615 45 1 4.4300 -5.5067 -0.4579 46 1 1.9834 -2.0210 -0.0006 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_12297754.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:38:15 Heat of formation + Delta-G solvation = -11.238578 kcal Electronic energy + Delta-G solvation = -31062.499190 eV Core-core repulsion = 26834.723491 eV Total energy + Delta-G solvation = -4227.775699 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.153 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -48.65249 -42.74946 -41.70687 -39.62399 -38.49429 -37.74132 -34.64949 -33.71493 -32.80873 -31.92144 -31.72583 -29.23562 -27.70932 -27.16719 -26.58426 -25.55621 -23.62987 -22.87373 -22.36049 -21.01834 -20.48392 -20.05947 -19.39001 -18.61715 -17.67527 -17.36182 -17.04923 -16.70307 -16.65995 -16.46011 -15.93440 -15.92171 -15.65138 -15.31190 -15.26730 -15.14034 -14.67943 -14.35697 -14.32920 -14.14575 -14.03363 -13.94588 -13.87786 -13.59235 -13.55686 -13.37788 -13.19204 -13.07945 -12.66167 -12.61225 -12.33070 -12.31925 -11.98941 -11.95736 -11.75066 -11.47626 -11.01525 -10.53301 -10.36594 -9.86353 -9.63599 -9.56491 -9.00851 -4.95435 0.35416 0.36630 0.45646 1.22518 1.53319 1.73671 1.80527 1.95426 2.08074 2.26395 2.71266 3.13289 3.20288 3.39716 3.49417 3.66819 3.72863 3.78800 3.83344 3.98985 4.01216 4.03660 4.13798 4.15700 4.23216 4.33789 4.47884 4.48473 4.55217 4.57193 4.60589 4.61665 4.68094 4.69318 4.80748 4.91642 4.94893 4.97140 5.01993 5.05823 5.11346 5.18774 5.28847 5.36568 5.52014 5.58962 5.64255 5.70399 5.88150 6.05058 6.32154 6.50768 6.79549 7.08877 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.084 3.916 3 C -0.229 4.229 4 C -0.025 4.025 5 O -0.555 6.555 6 Si 0.741 3.259 7 C -0.070 4.070 8 C -0.102 4.102 9 C -0.075 4.075 10 C 0.595 3.405 11 O -0.538 6.538 12 N -0.704 5.704 13 C 0.200 3.800 14 C -0.079 4.079 15 C -0.122 4.122 16 C -0.125 4.125 17 C -0.130 4.130 18 C -0.132 4.132 19 C -0.112 4.112 20 C -0.158 4.158 21 C 0.067 3.933 22 H 0.125 0.875 23 F -0.218 7.218 24 C -0.139 4.139 25 N -0.523 5.523 26 H 0.087 0.913 27 H 0.089 0.911 28 H 0.085 0.915 29 H 0.113 0.887 30 H 0.387 0.613 31 H -0.291 1.291 32 H -0.295 1.295 33 H 0.079 0.921 34 H 0.075 0.925 35 H 0.089 0.911 36 H 0.412 0.588 37 H 0.134 0.866 38 H 0.139 0.861 39 H 0.136 0.864 40 H 0.129 0.871 41 H 0.114 0.886 42 H 0.076 0.924 43 H 0.104 0.896 44 H 0.113 0.887 45 H 0.114 0.886 46 H 0.430 0.570 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.322 -3.533 0.875 4.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.035 4.035 3 C -0.235 4.235 4 C -0.137 4.137 5 O -0.363 6.363 6 Si 0.648 3.352 7 C -0.079 4.079 8 C -0.158 4.158 9 C -0.187 4.187 10 C 0.384 3.616 11 O -0.414 6.414 12 N -0.357 5.357 13 C 0.113 3.887 14 C -0.080 4.080 15 C -0.140 4.140 16 C -0.143 4.143 17 C -0.148 4.148 18 C -0.150 4.150 19 C -0.130 4.130 20 C -0.197 4.197 21 C 0.031 3.969 22 H 0.143 0.857 23 F -0.199 7.199 24 C -0.177 4.177 25 N -0.122 5.122 26 H 0.106 0.894 27 H 0.108 0.892 28 H 0.104 0.896 29 H 0.130 0.870 30 H 0.237 0.763 31 H -0.219 1.219 32 H -0.222 1.222 33 H 0.097 0.903 34 H 0.093 0.907 35 H 0.107 0.893 36 H 0.250 0.750 37 H 0.152 0.848 38 H 0.157 0.843 39 H 0.154 0.846 40 H 0.147 0.853 41 H 0.132 0.868 42 H 0.095 0.905 43 H 0.123 0.877 44 H 0.132 0.868 45 H 0.132 0.868 46 H 0.271 0.729 Dipole moment (debyes) X Y Z Total from point charges -3.240 -2.915 1.558 4.628 hybrid contribution -0.857 -0.883 0.054 1.232 sum -4.098 -3.797 1.612 5.815 Atomic orbital electron populations 1.20598 0.85745 1.04828 1.04258 1.20673 0.94649 0.85488 1.02729 1.19575 0.92755 0.95527 1.15651 1.24251 1.03422 0.91343 0.94693 1.86466 1.31086 1.80835 1.37941 0.93848 0.90365 0.75847 0.75114 1.19985 0.95059 0.91765 1.01053 1.20467 0.93959 0.98168 1.03228 1.19937 0.83305 0.93852 1.21577 1.17043 0.87319 0.81456 0.75755 1.90862 1.25097 1.75374 1.50109 1.45398 1.09586 1.04767 1.75943 1.19567 0.86152 0.91369 0.91611 1.19735 0.95184 0.98897 0.94202 1.21140 0.93693 1.00005 0.99149 1.21415 1.00514 0.99537 0.92849 1.21447 0.96180 0.98090 0.99037 1.21371 0.95145 0.99766 0.98684 1.20962 1.00023 0.99177 0.92860 1.24029 1.00456 1.00429 0.94738 1.23278 0.96066 0.89313 0.88278 0.85717 1.92801 1.82440 1.71305 1.73354 1.23961 1.06102 0.94716 0.92929 1.41750 1.04446 1.09030 1.56925 0.89395 0.89233 0.89602 0.87005 0.76289 1.21871 1.22208 0.90295 0.90672 0.89265 0.75023 0.84817 0.84275 0.84616 0.85277 0.86766 0.90498 0.87731 0.86831 0.86810 0.72946 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.69 10.15 71.24 0.72 1.42 16 2 C 0.08 -0.19 7.13 41.35 0.29 0.11 16 3 C -0.23 -0.24 4.71 -20.12 -0.09 -0.34 16 4 C -0.03 -0.02 2.85 71.24 0.20 0.18 16 5 O -0.56 -1.14 12.88 -148.98 -1.92 -3.05 16 6 Si 0.74 1.18 29.61 68.60 2.03 3.21 16 7 C -0.07 -0.15 5.84 -19.56 -0.11 -0.26 16 8 C -0.10 -0.01 7.98 71.24 0.57 0.55 16 9 C -0.07 -0.05 7.05 40.35 0.28 0.23 16 10 C 0.60 1.23 6.27 86.45 0.54 1.78 16 11 O -0.54 -4.87 13.18 -4.36 -0.06 -4.93 16 12 N -0.70 2.84 4.19 -427.83 -1.79 1.05 16 13 C 0.20 -0.36 0.94 3.39 0.00 -0.36 16 14 C -0.08 -0.18 4.83 -19.87 -0.10 -0.28 16 15 C -0.12 -0.25 8.60 22.27 0.19 -0.06 16 16 C -0.13 -0.25 10.05 22.27 0.22 -0.03 16 17 C -0.13 -0.33 10.05 22.27 0.22 -0.11 16 18 C -0.13 -0.47 10.05 22.27 0.22 -0.25 16 19 C -0.11 -0.43 8.86 22.27 0.20 -0.23 16 20 C -0.16 -0.08 6.63 31.12 0.21 0.12 16 21 C 0.07 -0.17 5.58 31.12 0.17 0.00 16 22 H 0.13 -0.74 8.14 -2.38 -0.02 -0.76 16 23 F -0.22 -0.79 17.41 44.97 0.78 0.00 16 24 C -0.14 0.79 7.19 31.12 0.22 1.01 16 25 N -0.52 2.54 5.99 -171.93 -1.03 1.51 16 26 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 27 H 0.09 -0.96 8.14 -2.39 -0.02 -0.98 16 28 H 0.09 -0.59 6.89 -2.39 -0.02 -0.61 16 29 H 0.11 -0.01 6.47 -2.38 -0.02 -0.03 16 30 H 0.39 -1.63 6.86 -74.05 -0.51 -2.14 16 31 H -0.29 -2.21 7.11 99.48 0.71 -1.51 16 32 H -0.30 -2.27 7.11 99.48 0.71 -1.56 16 33 H 0.08 -0.03 7.66 -2.39 -0.02 -0.05 16 34 H 0.07 0.29 6.50 -2.39 -0.02 0.28 16 35 H 0.09 -0.49 5.28 -2.39 -0.01 -0.50 16 36 H 0.41 -4.38 7.85 -92.71 -0.73 -5.10 16 37 H 0.13 -0.13 6.68 -2.91 -0.02 -0.14 16 38 H 0.14 -0.26 8.06 -2.91 -0.02 -0.29 16 39 H 0.14 -0.15 8.06 -2.91 -0.02 -0.18 16 40 H 0.13 0.10 8.06 -2.91 -0.02 0.07 16 41 H 0.11 0.32 6.70 -2.91 -0.02 0.30 16 42 H 0.08 0.32 7.05 -2.39 -0.02 0.30 16 43 H 0.10 0.11 6.32 -2.39 -0.02 0.10 16 44 H 0.11 -0.57 7.72 -2.39 -0.02 -0.58 16 45 H 0.11 -1.21 8.11 -2.39 -0.02 -1.23 16 46 H 0.43 -5.12 8.20 -92.71 -0.76 -5.88 16 Total: 0.00 -21.00 369.13 1.10 -19.91 By element: Atomic # 1 Polarization: -20.30 SS G_CDS: -0.90 Total: -21.19 kcal Atomic # 6 Polarization: -0.48 SS G_CDS: 3.98 Total: 3.50 kcal Atomic # 7 Polarization: 5.39 SS G_CDS: -2.82 Total: 2.56 kcal Atomic # 8 Polarization: -6.01 SS G_CDS: -1.98 Total: -7.99 kcal Atomic # 9 Polarization: -0.79 SS G_CDS: 0.78 Total: 0.00 kcal Atomic # 14 Polarization: 1.18 SS G_CDS: 2.03 Total: 3.21 kcal Total: -21.00 1.10 -19.91 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_12297754.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.668 kcal (2) G-P(sol) polarization free energy of solvation -21.003 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.336 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.097 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.906 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.239 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds