Wall clock time and date at job start Sat Mar 6 2021 20:38:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35661 * 116.99958 * 2 1 4 4 C 1.38402 * 120.12094 * 0.24163 * 3 2 1 5 5 C 1.38725 * 120.03240 * 180.27067 * 4 3 2 6 6 O 1.35713 * 119.86084 * 179.75709 * 5 4 3 7 7 C 1.42901 * 117.00447 * 359.97438 * 6 5 4 8 8 C 1.39138 * 120.27315 * 359.73943 * 5 4 3 9 9 C 1.50703 * 119.87880 * 180.02562 * 8 5 4 10 10 O 1.42902 * 109.47455 * 284.97774 * 9 8 5 11 11 Si 1.86297 * 109.47036 * 164.97766 * 9 8 5 12 12 C 1.37583 * 120.23894 * 0.02562 * 8 5 4 13 13 C 1.39810 * 119.96820 * 359.97438 * 12 8 5 14 14 C 1.47305 * 120.13903 * 179.97438 * 13 12 8 15 15 O 1.21613 * 120.00157 * 180.02562 * 14 13 12 16 16 N 1.34776 * 119.99784 * 0.02562 * 14 13 12 17 17 C 1.46492 * 119.99984 * 185.12492 * 16 14 13 18 18 C 1.50700 * 112.85243 * 294.27458 * 17 16 14 19 19 C 1.38234 * 119.99878 * 340.70499 * 18 17 16 20 20 C 1.38227 * 120.00310 * 179.97438 * 19 18 17 21 21 C 1.38238 * 119.99977 * 0.27888 * 20 19 18 22 22 C 1.38242 * 119.99600 * 359.52773 * 21 20 19 23 23 C 1.38230 * 120.00200 * 160.67942 * 18 17 16 24 24 C 1.53784 * 113.61455 * 163.07813 * 17 16 14 25 25 C 1.53783 * 87.08107 * 270.79974 * 24 17 16 26 26 H 1.08995 * 113.61483 * 89.20265 * 25 24 17 27 27 F 1.39898 * 113.61027 * 220.02050 * 25 24 17 28 28 C 1.53780 * 87.08169 * 334.56642 * 25 24 17 29 29 H 1.08995 * 109.47235 * 299.99717 * 1 2 3 30 30 H 1.09001 * 109.46900 * 59.99954 * 1 2 3 31 31 H 1.09002 * 109.47028 * 179.97438 * 1 2 3 32 32 H 1.08003 * 119.98122 * 359.97438 * 4 3 2 33 33 H 1.09003 * 109.46904 * 299.99548 * 7 6 5 34 34 H 1.09000 * 109.46946 * 59.99405 * 7 6 5 35 35 H 1.08998 * 109.46996 * 179.97438 * 7 6 5 36 36 H 1.09004 * 109.46941 * 44.97802 * 9 8 5 37 37 H 0.96706 * 113.99605 * 59.99815 * 10 9 8 38 38 H 1.48499 * 110.00045 * 300.00034 * 11 9 8 39 39 H 1.48506 * 109.99939 * 61.32183 * 11 9 8 40 40 H 1.08008 * 120.01352 * 180.02562 * 12 8 5 41 41 H 0.97004 * 119.99804 * 5.12012 * 16 14 13 42 42 H 1.08006 * 119.99805 * 359.97288 * 19 18 17 43 43 H 1.08006 * 120.00592 * 179.97438 * 20 19 18 44 44 H 1.08005 * 120.00094 * 179.72860 * 21 20 19 45 45 H 1.08000 * 119.99569 * 180.23823 * 22 21 20 46 46 H 1.08005 * 120.00340 * 359.97438 * 23 18 17 47 47 H 1.08993 * 113.61508 * 25.35254 * 24 17 16 48 48 H 1.09009 * 113.61313 * 156.25164 * 24 17 16 49 49 H 1.09003 * 113.61673 * 270.88430 * 28 25 24 50 50 H 1.08993 * 113.61375 * 139.98018 * 28 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2935 2.3711 0.0050 5 6 1.9252 3.6061 -0.0006 6 8 1.1850 4.7437 -0.0006 7 6 -0.2360 4.5931 0.0048 8 6 3.3144 3.6835 -0.0060 9 6 3.9914 5.0299 -0.0115 10 8 3.8895 5.6090 -1.3140 11 14 5.7876 4.8237 0.4376 12 6 4.0723 2.5352 -0.0061 13 6 3.4461 1.2852 -0.0004 14 6 4.2539 0.0533 -0.0012 15 8 3.7066 -1.0327 0.0033 16 7 5.5994 0.1299 -0.0069 17 6 6.4020 -1.0903 -0.1210 18 6 6.2567 -2.0001 1.0716 19 6 5.7755 -1.5006 2.2674 20 6 5.6416 -2.3351 3.3612 21 6 5.9944 -3.6679 3.2609 22 6 6.4719 -4.1683 2.0640 23 6 6.6040 -3.3341 0.9697 24 6 7.8634 -0.8310 -0.5234 25 6 7.3977 -0.9394 -1.9850 26 1 7.0738 0.0098 -2.4116 27 9 8.2945 -1.6276 -2.8093 28 6 6.2411 -1.8119 -1.4694 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 0.2149 2.3165 0.0086 33 1 -0.5464 4.0418 -0.8829 34 1 -0.5400 4.0459 0.8971 35 1 -0.7056 5.5768 0.0046 36 1 3.5077 5.6827 0.7152 37 1 2.9802 5.7455 -1.6136 38 1 5.9072 4.2223 1.7901 39 1 6.4656 3.9614 -0.5635 40 1 5.1504 2.5995 -0.0099 41 1 6.0364 0.9930 0.0645 42 1 5.5041 -0.4582 2.3470 43 1 5.2660 -1.9447 4.2956 44 1 5.8940 -4.3189 4.1168 45 1 6.7439 -5.2105 1.9846 46 1 6.9793 -3.7246 0.0353 47 1 8.2215 0.1619 -0.2517 48 1 8.5467 -1.6254 -0.2228 49 1 6.4808 -2.8744 -1.4274 50 1 5.2896 -1.6108 -1.9614 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:38:19 Heat of formation + Delta-G solvation = -88.124656 kcal Electronic energy + Delta-G solvation = -37748.604226 eV Core-core repulsion = 32817.329883 eV Total energy + Delta-G solvation = -4931.274343 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.156 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -48.51950 -42.31089 -41.61641 -40.28137 -39.47459 -38.57382 -38.26582 -36.97603 -34.31736 -32.29759 -32.08621 -31.71200 -31.37844 -29.20958 -28.38436 -27.18790 -26.18808 -25.99815 -24.62809 -23.50905 -23.00462 -22.43296 -21.62602 -20.37888 -20.05733 -18.80520 -18.61575 -18.44910 -17.83676 -17.36344 -17.31349 -17.22292 -16.73783 -16.70505 -16.50150 -16.43804 -15.99927 -15.86125 -15.71846 -15.58296 -15.47901 -15.35241 -14.97226 -14.36443 -14.34683 -14.25355 -14.03395 -13.94523 -13.77131 -13.68649 -13.56916 -13.37928 -13.24399 -12.90656 -12.74814 -12.63504 -12.54499 -12.23919 -12.21405 -11.84921 -11.79478 -11.65056 -11.43448 -11.36932 -11.11516 -10.72792 -10.19346 -10.03345 -9.71757 -9.50307 -9.24288 -4.90699 -0.33650 0.01662 0.49075 0.60433 1.28859 1.56138 1.75617 1.82605 1.86234 1.91529 2.05045 2.58841 2.82186 3.14124 3.24362 3.30996 3.40644 3.46512 3.51154 3.61907 3.65800 3.75371 3.84875 3.89909 3.94002 3.96020 4.03619 4.05633 4.06439 4.13450 4.14164 4.20970 4.29232 4.30463 4.38500 4.45854 4.50048 4.55359 4.57379 4.67174 4.68710 4.75401 4.80703 4.90794 4.93248 5.03380 5.12789 5.16731 5.22035 5.40743 5.64070 5.71497 5.78884 5.83684 6.16045 6.17093 6.41531 6.56249 7.27451 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.273 6.273 3 C 0.234 3.766 4 C -0.308 4.308 5 C 0.210 3.790 6 O -0.306 6.306 7 C 0.022 3.978 8 C -0.187 4.187 9 C -0.069 4.069 10 O -0.535 6.535 11 Si 0.740 3.260 12 C -0.012 4.012 13 C -0.206 4.206 14 C 0.567 3.433 15 O -0.495 6.495 16 N -0.719 5.719 17 C 0.199 3.801 18 C -0.068 4.068 19 C -0.098 4.098 20 C -0.118 4.118 21 C -0.119 4.119 22 C -0.117 4.117 23 C -0.111 4.111 24 C -0.152 4.152 25 C 0.066 3.934 26 H 0.111 0.889 27 F -0.202 7.202 28 C -0.156 4.156 29 H 0.058 0.942 30 H 0.058 0.942 31 H 0.108 0.892 32 H 0.147 0.853 33 H 0.061 0.939 34 H 0.060 0.940 35 H 0.109 0.891 36 H 0.076 0.924 37 H 0.366 0.634 38 H -0.245 1.245 39 H -0.250 1.250 40 H 0.135 0.865 41 H 0.398 0.602 42 H 0.114 0.886 43 H 0.120 0.880 44 H 0.122 0.878 45 H 0.124 0.876 46 H 0.124 0.876 47 H 0.089 0.911 48 H 0.114 0.886 49 H 0.109 0.891 50 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.779 5.024 1.919 6.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.182 6.182 3 C 0.184 3.816 4 C -0.328 4.328 5 C 0.163 3.837 6 O -0.218 6.218 7 C -0.072 4.072 8 C -0.189 4.189 9 C -0.177 4.177 10 O -0.341 6.341 11 Si 0.638 3.362 12 C -0.031 4.031 13 C -0.210 4.210 14 C 0.355 3.645 15 O -0.368 6.368 16 N -0.373 5.373 17 C 0.112 3.888 18 C -0.069 4.069 19 C -0.116 4.116 20 C -0.136 4.136 21 C -0.137 4.137 22 C -0.135 4.135 23 C -0.129 4.129 24 C -0.190 4.190 25 C 0.030 3.970 26 H 0.128 0.872 27 F -0.182 7.182 28 C -0.194 4.194 29 H 0.076 0.924 30 H 0.076 0.924 31 H 0.126 0.874 32 H 0.164 0.836 33 H 0.079 0.921 34 H 0.079 0.921 35 H 0.127 0.873 36 H 0.094 0.906 37 H 0.214 0.786 38 H -0.170 1.170 39 H -0.175 1.175 40 H 0.152 0.848 41 H 0.234 0.766 42 H 0.132 0.868 43 H 0.138 0.862 44 H 0.140 0.860 45 H 0.142 0.858 46 H 0.142 0.858 47 H 0.107 0.893 48 H 0.133 0.867 49 H 0.128 0.872 50 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -1.793 3.625 2.128 4.570 hybrid contribution -2.144 -0.133 -0.136 2.153 sum -3.937 3.493 1.992 5.627 Atomic orbital electron populations 1.23254 0.78116 1.04971 1.01317 1.86410 1.21262 1.24857 1.85713 1.18684 0.90503 0.84531 0.87877 1.21299 1.01168 0.91433 1.18881 1.18715 0.90240 0.84872 0.89908 1.86040 1.19950 1.28717 1.87108 1.23235 0.77279 1.04845 1.01868 1.19448 0.90475 0.96742 1.12192 1.25101 1.13604 0.90386 0.88640 1.86715 1.32123 1.83407 1.31822 0.92837 0.75856 0.88445 0.79047 1.20759 0.98824 0.90323 0.93172 1.19057 0.90774 0.93426 1.17775 1.17755 0.81354 0.88727 0.76670 1.90886 1.71012 1.28274 1.46662 1.45630 1.05906 1.08595 1.77194 1.19588 0.91208 0.85045 0.93006 1.19496 0.99810 0.93836 0.93785 1.20836 0.98605 0.99637 0.92529 1.21121 0.99961 0.94002 0.98537 1.21183 0.99083 0.95569 0.97889 1.21119 0.99638 0.99727 0.92990 1.20944 1.00434 0.92629 0.98888 1.24007 0.95154 1.04992 0.94855 1.23113 0.89087 0.96222 0.88562 0.87177 1.92829 1.69630 1.81279 1.74510 1.24064 0.99711 1.00944 0.94710 0.92375 0.92361 0.87363 0.83583 0.92062 0.92126 0.87254 0.90601 0.78626 1.16953 1.17524 0.84816 0.76593 0.86834 0.86194 0.86046 0.85837 0.85848 0.89266 0.86748 0.87247 0.89140 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.98 16 2 O -0.27 -0.97 8.56 -40.60 -0.35 -1.32 16 3 C 0.23 0.66 6.70 -38.73 -0.26 0.40 16 4 C -0.31 -0.20 8.01 -39.34 -0.31 -0.51 16 5 C 0.21 0.17 6.62 -39.07 -0.26 -0.09 16 6 O -0.31 0.17 9.36 -18.84 -0.18 -0.01 16 7 C 0.02 -0.08 9.80 101.05 0.99 0.91 16 8 C -0.19 -0.23 5.27 -104.53 -0.55 -0.78 16 9 C -0.07 -0.01 2.32 36.01 0.08 0.07 16 10 O -0.54 -0.49 12.65 -35.23 -0.45 -0.93 16 11 Si 0.74 -0.90 30.39 -169.99 -5.17 -6.07 16 12 C -0.01 -0.02 8.13 -39.23 -0.32 -0.34 16 13 C -0.21 -0.61 5.89 -104.83 -0.62 -1.22 16 14 C 0.57 2.16 6.44 -12.57 -0.08 2.08 16 15 O -0.49 -3.49 13.71 -16.66 -0.23 -3.72 16 16 N -0.72 -0.87 4.21 -49.03 -0.21 -1.08 16 17 C 0.20 0.27 0.92 -132.16 -0.12 0.15 16 18 C -0.07 -0.19 4.49 -104.63 -0.47 -0.66 16 19 C -0.10 -0.33 8.74 -39.59 -0.35 -0.67 16 20 C -0.12 -0.33 10.05 -39.59 -0.40 -0.73 16 21 C -0.12 -0.28 10.05 -39.58 -0.40 -0.67 16 22 C -0.12 -0.26 10.05 -39.58 -0.40 -0.65 16 23 C -0.11 -0.27 9.03 -39.59 -0.36 -0.63 16 24 C -0.15 0.07 7.20 -25.92 -0.19 -0.12 16 25 C 0.07 0.04 5.58 -25.92 -0.14 -0.10 16 26 H 0.11 -0.06 8.14 -51.93 -0.42 -0.48 16 27 F -0.20 -0.62 17.41 2.25 0.04 -0.59 16 28 C -0.16 -0.26 6.71 -25.92 -0.17 -0.44 16 29 H 0.06 -0.13 7.65 -51.93 -0.40 -0.53 16 30 H 0.06 -0.13 7.67 -51.93 -0.40 -0.53 16 31 H 0.11 -0.19 8.14 -51.93 -0.42 -0.62 16 32 H 0.15 -0.26 4.50 -52.48 -0.24 -0.50 16 33 H 0.06 -0.26 7.65 -51.93 -0.40 -0.66 16 34 H 0.06 -0.25 7.65 -51.93 -0.40 -0.65 16 35 H 0.11 -0.56 8.14 -51.93 -0.42 -0.99 16 36 H 0.08 -0.05 7.82 -51.93 -0.41 -0.45 16 37 H 0.37 -0.35 8.59 45.56 0.39 0.04 16 38 H -0.25 0.04 7.11 56.52 0.40 0.44 16 39 H -0.25 -0.02 6.80 56.52 0.38 0.36 16 40 H 0.13 -0.02 3.25 -52.48 -0.17 -0.19 16 41 H 0.40 -0.39 6.70 -40.82 -0.27 -0.66 16 42 H 0.11 0.33 7.00 -52.48 -0.37 -0.04 16 43 H 0.12 0.14 8.06 -52.48 -0.42 -0.28 16 44 H 0.12 0.05 8.06 -52.48 -0.42 -0.37 16 45 H 0.12 0.03 8.06 -52.49 -0.42 -0.39 16 46 H 0.12 0.11 6.19 -52.48 -0.33 -0.22 16 47 H 0.09 -0.19 8.09 -51.93 -0.42 -0.61 16 48 H 0.11 -0.06 7.99 -51.92 -0.41 -0.48 16 49 H 0.11 0.15 5.95 -51.93 -0.31 -0.16 16 50 H 0.09 0.28 7.53 -51.93 -0.39 -0.11 16 LS Contribution 404.84 15.07 6.10 6.10 Total: 0.00 -8.69 404.84 -10.02 -18.71 By element: Atomic # 1 Polarization: -1.81 SS G_CDS: -6.26 Total: -8.07 kcal Atomic # 6 Polarization: 0.30 SS G_CDS: -3.33 Total: -3.03 kcal Atomic # 7 Polarization: -0.87 SS G_CDS: -0.21 Total: -1.08 kcal Atomic # 8 Polarization: -4.78 SS G_CDS: -1.20 Total: -5.98 kcal Atomic # 9 Polarization: -0.62 SS G_CDS: 0.04 Total: -0.59 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.17 Total: -6.07 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -8.69 -10.02 -18.71 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.413 kcal (2) G-P(sol) polarization free energy of solvation -8.689 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.101 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.023 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.712 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.125 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds