Wall clock time and date at job start Sat Mar 6 2021 20:38:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86303 * 109.46902 * 2 1 4 4 C 1.50697 * 109.47358 * 120.00079 * 2 1 3 5 5 C 1.38184 * 119.84230 * 255.02053 * 4 2 1 6 6 C 1.38315 * 120.14199 * 179.71911 * 5 4 2 7 7 F 1.35101 * 120.08176 * 180.27950 * 6 5 4 8 8 C 1.39798 * 119.83538 * 0.53628 * 6 5 4 9 9 C 1.47692 * 120.15824 * 179.74513 * 8 6 5 10 10 O 1.21575 * 119.99877 * 359.72223 * 9 8 6 11 11 N 1.34781 * 120.00205 * 179.72293 * 9 8 6 12 12 C 1.46499 * 120.00145 * 185.05540 * 11 9 8 13 13 C 1.50705 * 112.85116 * 54.64179 * 12 11 9 14 14 C 1.38237 * 120.00183 * 201.45943 * 13 12 11 15 15 C 1.38226 * 120.00075 * 179.76924 * 14 13 12 16 16 C 1.38238 * 119.99903 * 0.50615 * 15 14 13 17 17 C 1.38237 * 120.00035 * 359.74966 * 16 15 14 18 18 C 1.38228 * 119.99930 * 359.97438 * 17 16 15 19 19 C 1.53785 * 113.60971 * 283.34280 * 12 11 9 20 20 C 1.53780 * 87.07726 * 270.87985 * 19 12 11 21 21 H 1.08999 * 113.68894 * 89.13399 * 20 19 12 22 22 F 1.39899 * 113.61584 * 220.01846 * 20 19 12 23 23 C 1.53770 * 113.61665 * 185.84567 * 12 11 9 24 24 C 1.39663 * 119.68880 * 359.46603 * 8 6 5 25 25 C 1.38068 * 119.85075 * 0.25805 * 24 8 6 26 26 F 1.35097 * 119.92003 * 180.02562 * 25 24 8 27 27 H 0.96698 * 114.00097 * 299.99302 * 1 2 3 28 28 H 1.09006 * 109.47005 * 240.00133 * 2 1 3 29 29 H 1.48499 * 109.99812 * 300.00109 * 3 2 1 30 30 H 1.48497 * 110.00078 * 61.32243 * 3 2 1 31 31 H 1.07994 * 119.92642 * 359.97438 * 5 4 2 32 32 H 0.97001 * 119.99793 * 5.32204 * 11 9 8 33 33 H 1.08009 * 119.99487 * 0.02562 * 14 13 12 34 34 H 1.08000 * 120.00335 * 180.23375 * 15 14 13 35 35 H 1.08007 * 120.00131 * 179.72459 * 16 15 14 36 36 H 1.07996 * 119.99989 * 179.97438 * 17 16 15 37 37 H 1.07999 * 120.00292 * 179.97438 * 18 17 16 38 38 H 1.08995 * 113.62099 * 25.42915 * 19 12 11 39 39 H 1.09006 * 113.61424 * 156.33841 * 19 12 11 40 40 H 1.09005 * 113.61788 * 203.66070 * 23 12 11 41 41 H 1.09000 * 113.61194 * 334.56010 * 23 12 11 42 42 H 1.08000 * 120.07356 * 180.23030 * 24 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4527 0.0198 2.2813 6 6 2.9102 -0.6254 3.4160 7 9 3.4145 0.0901 4.4451 8 6 2.8545 -2.0202 3.4931 9 6 3.3463 -2.7169 4.6990 10 8 3.8055 -2.0776 5.6255 11 7 3.2860 -4.0613 4.7722 12 6 3.6699 -4.7455 6.0095 13 6 2.9178 -4.2417 7.2144 14 6 3.4357 -4.4323 8.4818 15 6 2.7482 -3.9661 9.5867 16 6 1.5378 -3.3183 9.4248 17 6 1.0173 -3.1324 8.1578 18 6 1.7076 -3.5936 7.0525 19 6 5.1909 -4.8287 6.2208 20 6 5.1478 -6.1524 5.4394 21 1 5.2663 -6.0296 4.3628 22 9 5.9825 -7.1428 5.9681 23 6 3.6822 -6.2783 5.8875 24 6 2.3263 -2.7514 2.4268 25 6 1.8680 -2.0937 1.3027 26 9 1.3562 -2.7995 0.2707 27 1 -0.3933 0.4416 0.7651 28 1 1.7924 -0.5138 -0.8900 29 1 1.5614 2.4679 -1.2085 30 1 1.5879 2.4586 1.2242 31 1 2.4992 1.0969 2.2183 32 1 2.9920 -4.5762 4.0045 33 1 4.3795 -4.9420 8.6085 34 1 3.1546 -4.1116 10.5766 35 1 0.9984 -2.9579 10.2884 36 1 0.0715 -2.6267 8.0314 37 1 1.3008 -3.4487 6.0626 38 1 5.7461 -4.0399 5.7132 39 1 5.4808 -4.9472 7.2649 40 1 3.5596 -6.7932 6.8404 41 1 3.0193 -6.6598 5.1108 42 1 2.2769 -3.8289 2.4813 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:38:58 Heat of formation + Delta-G solvation = -101.744011 kcal Electronic energy + Delta-G solvation = -33089.545534 eV Core-core repulsion = 28167.212282 eV Total energy + Delta-G solvation = -4922.333252 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.107 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -50.15699 -50.04555 -48.61540 -42.16596 -40.71293 -39.56205 -38.65181 -37.82188 -34.77142 -33.18000 -31.90120 -31.70924 -31.47872 -28.08826 -27.28428 -26.00367 -24.53863 -24.09404 -23.47760 -22.62108 -22.08428 -20.49087 -19.86535 -18.93746 -18.71607 -18.42031 -18.01602 -17.45213 -17.38747 -16.99731 -16.92337 -16.60781 -16.56769 -16.34110 -16.10650 -16.03164 -15.75729 -15.65422 -15.60974 -15.43375 -15.10902 -14.70939 -14.36741 -14.23770 -14.03280 -13.87473 -13.85913 -13.66330 -13.39025 -13.26360 -13.05170 -12.71121 -12.49951 -12.29758 -12.00128 -11.93955 -11.73525 -11.54485 -11.18480 -10.90874 -10.70790 -10.40141 -9.90074 -9.79402 -9.58455 -5.16073 -0.91016 -0.42591 0.40375 0.52486 0.98078 1.32448 1.37631 1.60897 1.76747 2.16874 2.67912 2.71797 2.75129 2.96228 3.01465 3.05939 3.13371 3.26435 3.33952 3.36678 3.49876 3.59565 3.63732 3.93870 3.99331 4.04258 4.10947 4.20270 4.21747 4.23607 4.39202 4.42404 4.44144 4.46366 4.55551 4.60394 4.61932 4.64205 4.79459 4.89898 5.03598 5.13283 5.22868 5.28029 5.55720 5.64139 5.66238 6.07579 6.12648 6.13807 6.91827 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.519 6.519 2 C -0.080 4.080 3 Si 0.696 3.304 4 C -0.096 4.096 5 C -0.139 4.139 6 C 0.161 3.839 7 F -0.104 7.104 8 C -0.142 4.142 9 C 0.561 3.439 10 O -0.490 6.490 11 N -0.710 5.710 12 C 0.198 3.802 13 C -0.069 4.069 14 C -0.110 4.110 15 C -0.115 4.115 16 C -0.117 4.117 17 C -0.117 4.117 18 C -0.100 4.100 19 C -0.160 4.160 20 C 0.066 3.934 21 H 0.111 0.889 22 F -0.201 7.201 23 C -0.151 4.151 24 C -0.095 4.095 25 C 0.112 3.888 26 F -0.120 7.120 27 H 0.378 0.622 28 H 0.128 0.872 29 H -0.248 1.248 30 H -0.254 1.254 31 H 0.159 0.841 32 H 0.404 0.596 33 H 0.125 0.875 34 H 0.125 0.875 35 H 0.122 0.878 36 H 0.121 0.879 37 H 0.113 0.887 38 H 0.090 0.910 39 H 0.110 0.890 40 H 0.115 0.885 41 H 0.091 0.909 42 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.180 -0.893 -2.065 2.257 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.325 6.325 2 C -0.189 4.189 3 Si 0.595 3.405 4 C -0.098 4.098 5 C -0.158 4.158 6 C 0.140 3.860 7 F -0.081 7.081 8 C -0.146 4.146 9 C 0.347 3.653 10 O -0.363 6.363 11 N -0.364 5.364 12 C 0.112 3.888 13 C -0.070 4.070 14 C -0.128 4.128 15 C -0.133 4.133 16 C -0.135 4.135 17 C -0.135 4.135 18 C -0.118 4.118 19 C -0.198 4.198 20 C 0.030 3.970 21 H 0.129 0.871 22 F -0.182 7.182 23 C -0.189 4.189 24 C -0.114 4.114 25 C 0.092 3.908 26 F -0.098 7.098 27 H 0.226 0.774 28 H 0.145 0.855 29 H -0.172 1.172 30 H -0.179 1.179 31 H 0.176 0.824 32 H 0.241 0.759 33 H 0.143 0.857 34 H 0.143 0.857 35 H 0.140 0.860 36 H 0.139 0.861 37 H 0.131 0.869 38 H 0.109 0.891 39 H 0.128 0.872 40 H 0.133 0.867 41 H 0.109 0.891 42 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.037 0.081 -1.927 1.930 hybrid contribution -1.247 -0.507 0.114 1.351 sum -1.211 -0.426 -1.814 2.222 Atomic orbital electron populations 1.86693 1.16660 1.79938 1.49256 1.25113 0.84709 1.11764 0.97309 0.94743 0.91329 0.73426 0.80961 1.20437 0.99263 0.92625 0.97469 1.21085 1.00920 1.01855 0.91900 1.17482 0.95216 0.87921 0.85355 1.91666 1.83521 1.77087 1.55862 1.19855 1.05781 0.92540 0.96412 1.17793 0.79132 0.82063 0.86343 1.90941 1.42308 1.65471 1.37584 1.45570 1.69441 1.06239 1.15107 1.19634 0.94265 0.91834 0.83117 1.19376 0.95018 0.99492 0.93081 1.20945 0.99804 1.00363 0.91662 1.21133 0.95235 0.98255 0.98706 1.21203 0.96140 0.98866 0.97335 1.21119 0.99969 0.99737 0.92659 1.20812 0.94591 0.97865 0.98560 1.24142 0.95346 0.97256 1.03083 1.23118 0.88730 0.86368 0.98756 0.87115 1.92839 1.73518 1.63685 1.88131 1.24019 0.96519 0.93532 1.04870 1.21180 0.97852 1.01059 0.91359 1.17212 0.98837 0.88838 0.85882 1.91589 1.84197 1.77999 1.56040 0.77398 0.85461 1.17238 1.17869 0.82410 0.75948 0.85748 0.85742 0.85954 0.86120 0.86938 0.89126 0.87167 0.86689 0.89083 0.83122 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.14 12.88 -35.23 -0.45 -0.32 16 2 C -0.08 0.15 2.44 36.00 0.09 0.24 16 3 Si 0.70 -1.88 30.24 -169.99 -5.14 -7.02 16 4 C -0.10 0.17 5.27 -104.49 -0.55 -0.39 16 5 C -0.14 0.23 8.62 -39.57 -0.34 -0.11 16 6 C 0.16 0.06 7.28 -38.97 -0.28 -0.23 16 7 F -0.10 -0.31 15.55 2.25 0.04 -0.28 16 8 C -0.14 0.08 5.88 -104.92 -0.62 -0.54 16 9 C 0.56 0.45 6.17 -12.40 -0.08 0.37 16 10 O -0.49 -2.32 13.97 5.30 0.07 -2.24 16 11 N -0.71 1.39 4.49 -48.90 -0.22 1.17 16 12 C 0.20 -0.18 0.93 -132.16 -0.12 -0.30 16 13 C -0.07 -0.08 4.27 -104.62 -0.45 -0.53 16 14 C -0.11 -0.13 9.14 -39.59 -0.36 -0.49 16 15 C -0.12 -0.14 10.05 -39.59 -0.40 -0.54 16 16 C -0.12 -0.17 10.05 -39.58 -0.40 -0.57 16 17 C -0.12 -0.20 10.05 -39.59 -0.40 -0.60 16 18 C -0.10 -0.18 8.32 -39.59 -0.33 -0.51 16 19 C -0.16 0.08 6.93 -25.92 -0.18 -0.10 16 20 C 0.07 -0.10 5.58 -25.92 -0.14 -0.25 16 21 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 22 F -0.20 -0.30 17.41 2.25 0.04 -0.26 16 23 C -0.15 0.38 7.19 -25.93 -0.19 0.19 16 24 C -0.10 0.24 9.51 -39.11 -0.37 -0.13 16 25 C 0.11 -0.14 7.23 -39.49 -0.29 -0.43 16 26 F -0.12 -0.03 16.73 2.25 0.04 0.01 16 27 H 0.38 -1.29 8.70 45.56 0.40 -0.90 16 28 H 0.13 -0.29 7.89 -51.93 -0.41 -0.70 16 29 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 30 H -0.25 0.31 6.68 56.52 0.38 0.69 16 31 H 0.16 -0.47 4.83 -52.49 -0.25 -0.72 16 32 H 0.40 -2.03 6.68 -40.82 -0.27 -2.30 16 33 H 0.12 -0.05 6.10 -52.48 -0.32 -0.37 16 34 H 0.12 -0.07 8.06 -52.49 -0.42 -0.50 16 35 H 0.12 -0.04 8.06 -52.48 -0.42 -0.46 16 36 H 0.12 0.03 8.06 -52.49 -0.42 -0.40 16 37 H 0.11 0.11 6.79 -52.49 -0.36 -0.25 16 38 H 0.09 0.05 8.14 -51.93 -0.42 -0.38 16 39 H 0.11 -0.05 5.89 -51.93 -0.31 -0.35 16 40 H 0.11 -0.24 8.05 -51.93 -0.42 -0.66 16 41 H 0.09 -0.40 8.10 -51.93 -0.42 -0.82 16 42 H 0.15 -0.82 6.42 -52.49 -0.34 -1.16 16 LS Contribution 359.85 15.07 5.42 5.42 Total: 0.00 -8.60 359.85 -9.64 -18.24 By element: Atomic # 1 Polarization: -5.79 SS G_CDS: -4.03 Total: -9.82 kcal Atomic # 6 Polarization: 0.49 SS G_CDS: -5.40 Total: -4.91 kcal Atomic # 7 Polarization: 1.39 SS G_CDS: -0.22 Total: 1.17 kcal Atomic # 8 Polarization: -2.18 SS G_CDS: -0.38 Total: -2.56 kcal Atomic # 9 Polarization: -0.63 SS G_CDS: 0.11 Total: -0.52 kcal Atomic # 14 Polarization: -1.88 SS G_CDS: -5.14 Total: -7.02 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -8.60 -9.64 -18.24 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.504 kcal (2) G-P(sol) polarization free energy of solvation -8.600 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.104 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.640 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.240 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.744 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds