Wall clock time and date at job start Sat Mar 6 2021 20:39:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35654 * 117.00092 * 2 1 4 4 C 1.40141 * 120.14570 * 179.97438 * 3 2 1 5 5 C 1.47534 * 120.19542 * 0.03055 * 4 3 2 6 6 O 1.21593 * 119.99598 * 359.97438 * 5 4 3 7 7 N 1.34768 * 120.00307 * 179.97438 * 5 4 3 8 8 C 1.46502 * 120.00266 * 184.99051 * 7 5 4 9 9 C 1.50703 * 112.90289 * 66.50670 * 8 7 5 10 10 C 1.38237 * 119.99762 * 191.11338 * 9 8 7 11 11 C 1.38234 * 120.00109 * 179.78554 * 10 9 8 12 12 C 1.38239 * 119.99709 * 0.44582 * 11 10 9 13 13 C 1.38235 * 120.00309 * 359.81455 * 12 11 10 14 14 C 1.38226 * 120.00154 * 11.39126 * 9 8 7 15 15 C 1.53773 * 113.61713 * 295.25556 * 8 7 5 16 16 C 1.53784 * 87.17437 * 270.92455 * 15 8 7 17 17 H 1.09001 * 113.61626 * 89.07509 * 16 15 8 18 18 F 1.39899 * 113.61271 * 219.97888 * 16 15 8 19 19 C 1.53777 * 87.07875 * 334.52537 * 16 15 8 20 20 C 1.39709 * 119.61271 * 180.29371 * 4 3 2 21 21 C 1.37785 * 119.90982 * 359.47993 * 20 4 3 22 22 C 1.50694 * 119.85239 * 180.25353 * 21 20 4 23 23 O 1.42902 * 109.47472 * 65.25200 * 22 21 20 24 24 Si 1.86308 * 109.47361 * 185.25389 * 22 21 20 25 25 C 1.38550 * 120.29894 * 0.50187 * 21 20 4 26 26 C 1.38059 * 120.38938 * 359.77116 * 25 21 20 27 27 H 1.08990 * 109.47671 * 179.97438 * 1 2 3 28 28 H 1.09003 * 109.47009 * 300.00476 * 1 2 3 29 29 H 1.09003 * 109.46926 * 59.99755 * 1 2 3 30 30 H 0.97006 * 119.99774 * 4.99692 * 7 5 4 31 31 H 1.08002 * 119.99666 * 0.02562 * 10 9 8 32 32 H 1.07998 * 120.00352 * 180.27903 * 11 10 9 33 33 H 1.07997 * 120.00045 * 179.82888 * 12 11 10 34 34 H 1.07993 * 120.00592 * 180.02562 * 13 12 11 35 35 H 1.08001 * 120.00478 * 359.97438 * 14 9 8 36 36 H 1.08999 * 113.61698 * 156.33240 * 15 8 7 37 37 H 1.09001 * 113.61292 * 25.51287 * 15 8 7 38 38 H 1.09003 * 113.61688 * 139.98076 * 19 16 15 39 39 H 1.08999 * 113.61530 * 270.79828 * 19 16 15 40 40 H 1.07998 * 120.04300 * 179.70316 * 20 4 3 41 41 H 1.09003 * 109.46801 * 305.25018 * 22 21 20 42 42 H 0.96699 * 114.00124 * 180.02562 * 23 22 21 43 43 H 1.48500 * 109.99398 * 299.99505 * 24 22 21 44 44 H 1.48494 * 110.00004 * 61.31555 * 24 22 21 45 45 H 1.08004 * 119.80626 * 179.74542 * 25 21 20 46 46 H 1.08000 * 119.95640 * 179.97438 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4442 1.2856 0.0005 5 6 4.2551 0.0530 0.0004 6 8 3.7094 -1.0336 0.0003 7 7 5.6005 0.1315 0.0004 8 6 6.4054 -1.0876 -0.1100 9 6 6.2587 -1.7681 -1.4467 10 6 6.7641 -3.0412 -1.6332 11 6 6.6257 -3.6672 -2.8579 12 6 5.9901 -3.0164 -3.8988 13 6 5.4895 -1.7412 -3.7139 14 6 5.6241 -1.1170 -2.4878 15 6 6.2480 -2.0403 1.0868 16 6 7.4037 -1.2737 1.7515 17 1 7.0773 -0.4175 2.3418 18 9 8.3013 -2.0983 2.4382 19 6 7.8690 -0.9030 0.3335 20 6 4.0669 2.5362 0.0068 21 6 3.3040 3.6836 0.0015 22 6 3.9770 5.0319 0.0024 23 8 4.7000 5.2043 -1.2181 24 14 2.6887 6.3690 0.1553 25 6 1.9208 3.6033 0.0005 26 6 1.2926 2.3739 0.0000 27 1 -0.3634 -1.0275 -0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 6.0359 0.9952 0.0737 31 1 7.2636 -3.5483 -0.8209 32 1 7.0165 -4.6636 -3.0023 33 1 5.8845 -3.5044 -4.8565 34 1 4.9926 -1.2330 -4.5270 35 1 5.2328 -0.1208 -2.3433 36 1 6.4889 -3.0775 0.8539 37 1 5.2965 -1.9334 1.6077 38 1 8.2259 0.1232 0.2453 39 1 8.5543 -1.6285 -0.1049 40 1 5.1447 2.6035 0.0121 41 1 4.6661 5.0933 0.8447 42 1 5.1597 6.0522 -1.2865 43 1 1.7430 6.2959 -0.9873 44 1 1.9512 6.2197 1.4354 45 1 1.3306 4.5078 0.0005 46 1 0.2139 2.3195 -0.0003 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:39:02 Heat of formation + Delta-G solvation = -50.878504 kcal Electronic energy + Delta-G solvation = -32729.364334 eV Core-core repulsion = 28273.924916 eV Total energy + Delta-G solvation = -4455.439418 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -48.51298 -42.11840 -41.24722 -39.44579 -39.16036 -38.35389 -37.28073 -34.44348 -32.62702 -32.04083 -31.75434 -31.53588 -28.67250 -27.12898 -26.28502 -26.20496 -24.98300 -23.51084 -22.82215 -22.35187 -21.48060 -20.29529 -19.50807 -18.58742 -18.48025 -18.20198 -17.68362 -17.28707 -16.85747 -16.77718 -16.51986 -16.26236 -16.02962 -15.86647 -15.64578 -15.55672 -15.51067 -15.13255 -14.80154 -14.49884 -14.24493 -14.16630 -13.99531 -13.92758 -13.82680 -13.58698 -13.55469 -13.19094 -13.03333 -12.59727 -12.50046 -12.33478 -12.22988 -12.14028 -11.99029 -11.85134 -11.64384 -11.42091 -10.77515 -10.41784 -10.29561 -10.14168 -9.71825 -9.50770 -9.33715 -5.08793 -0.33205 0.12729 0.48609 0.60146 1.15657 1.52284 1.78470 1.84031 1.93483 2.16029 2.63195 2.82371 3.15880 3.23002 3.26402 3.39532 3.47307 3.50102 3.61372 3.71892 3.75686 3.92287 3.95270 4.09996 4.13450 4.14676 4.15684 4.17554 4.23357 4.31434 4.36953 4.51096 4.52266 4.56338 4.58301 4.59458 4.68898 4.77067 4.80296 4.95774 4.97262 5.05764 5.13024 5.17489 5.22073 5.40077 5.42964 5.64249 5.71826 5.79676 6.16389 6.21495 6.45052 6.49990 7.27994 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.277 6.277 3 C 0.195 3.805 4 C -0.175 4.175 5 C 0.565 3.435 6 O -0.495 6.495 7 N -0.716 5.716 8 C 0.199 3.801 9 C -0.071 4.071 10 C -0.111 4.111 11 C -0.117 4.117 12 C -0.119 4.119 13 C -0.118 4.118 14 C -0.099 4.099 15 C -0.155 4.155 16 C 0.066 3.934 17 H 0.110 0.890 18 F -0.203 7.203 19 C -0.151 4.151 20 C -0.017 4.017 21 C -0.123 4.123 22 C -0.066 4.066 23 O -0.546 6.546 24 Si 0.680 3.320 25 C -0.052 4.052 26 C -0.212 4.212 27 H 0.106 0.894 28 H 0.058 0.942 29 H 0.058 0.942 30 H 0.402 0.598 31 H 0.123 0.877 32 H 0.124 0.876 33 H 0.122 0.878 34 H 0.121 0.879 35 H 0.115 0.885 36 H 0.106 0.894 37 H 0.093 0.907 38 H 0.089 0.911 39 H 0.113 0.887 40 H 0.137 0.863 41 H 0.076 0.924 42 H 0.383 0.617 43 H -0.250 1.250 44 H -0.254 1.254 45 H 0.126 0.874 46 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.677 6.700 0.142 6.735 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.187 6.187 3 C 0.146 3.854 4 C -0.179 4.179 5 C 0.352 3.648 6 O -0.369 6.369 7 N -0.370 5.370 8 C 0.112 3.888 9 C -0.073 4.073 10 C -0.130 4.130 11 C -0.135 4.135 12 C -0.137 4.137 13 C -0.136 4.136 14 C -0.117 4.117 15 C -0.193 4.193 16 C 0.030 3.970 17 H 0.128 0.872 18 F -0.183 7.183 19 C -0.189 4.189 20 C -0.036 4.036 21 C -0.123 4.123 22 C -0.176 4.176 23 O -0.352 6.352 24 Si 0.582 3.418 25 C -0.070 4.070 26 C -0.231 4.231 27 H 0.125 0.875 28 H 0.077 0.923 29 H 0.077 0.923 30 H 0.239 0.761 31 H 0.141 0.859 32 H 0.142 0.858 33 H 0.140 0.860 34 H 0.139 0.861 35 H 0.133 0.867 36 H 0.125 0.875 37 H 0.112 0.888 38 H 0.108 0.892 39 H 0.131 0.869 40 H 0.154 0.846 41 H 0.093 0.907 42 H 0.231 0.769 43 H -0.175 1.175 44 H -0.179 1.179 45 H 0.143 0.857 46 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -0.747 5.253 0.124 5.308 hybrid contribution -0.021 0.160 0.074 0.177 sum -0.769 5.413 0.198 5.471 Atomic orbital electron populations 1.23243 0.78149 1.04834 1.01425 1.86384 1.21224 1.24981 1.86128 1.19042 0.90916 0.85007 0.90469 1.19310 0.90841 0.93773 1.13926 1.17866 0.81466 0.88746 0.76687 1.90879 1.71214 1.28271 1.46517 1.45579 1.05770 1.08827 1.76846 1.19615 0.91155 0.85692 0.92342 1.19535 0.99215 0.94720 0.93801 1.20910 1.00261 0.94138 0.97647 1.21120 0.99356 0.99933 0.93085 1.21191 0.98284 0.95112 0.99128 1.21144 0.99743 0.95443 0.97249 1.20892 0.98253 0.99842 0.92733 1.24041 0.99797 0.99937 0.95527 1.23120 0.89112 0.93443 0.91361 0.87209 1.92827 1.69613 1.74134 1.81768 1.24050 0.95085 1.04620 0.95149 1.20953 0.99841 0.89751 0.93059 1.19101 0.92811 0.94049 1.06347 1.24572 1.02971 1.00231 0.89868 1.86495 1.69349 1.42379 1.37023 0.95185 0.79681 0.86405 0.80546 1.20892 0.93857 0.97198 0.95078 1.21187 1.00760 0.91465 1.09679 0.87523 0.92333 0.92339 0.76146 0.85878 0.85809 0.86018 0.86145 0.86659 0.87523 0.88839 0.89207 0.86878 0.84552 0.90653 0.76898 1.17493 1.17875 0.85708 0.84141 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 0.99 16 2 O -0.28 -1.11 8.57 -40.54 -0.35 -1.46 16 3 C 0.19 0.61 6.70 -38.70 -0.26 0.35 16 4 C -0.17 -0.45 5.89 -104.84 -0.62 -1.07 16 5 C 0.56 1.89 6.00 -12.47 -0.07 1.81 16 6 O -0.50 -3.42 13.54 -16.59 -0.22 -3.65 16 7 N -0.72 -0.23 4.29 -48.82 -0.21 -0.44 16 8 C 0.20 0.17 0.95 -132.02 -0.13 0.05 16 9 C -0.07 -0.19 4.83 -104.63 -0.51 -0.69 16 10 C -0.11 -0.24 8.62 -39.58 -0.34 -0.58 16 11 C -0.12 -0.24 10.05 -39.58 -0.40 -0.63 16 12 C -0.12 -0.27 10.05 -39.58 -0.40 -0.67 16 13 C -0.12 -0.34 10.05 -39.58 -0.40 -0.74 16 14 C -0.10 -0.33 8.80 -39.58 -0.35 -0.68 16 15 C -0.15 -0.23 6.64 -25.92 -0.17 -0.41 16 16 C 0.07 0.01 5.58 -25.92 -0.14 -0.14 16 17 H 0.11 -0.15 8.14 -51.93 -0.42 -0.57 16 18 F -0.20 -0.56 17.41 2.25 0.04 -0.52 16 19 C -0.15 0.16 7.18 -25.78 -0.19 -0.03 16 20 C -0.02 -0.01 9.16 -39.20 -0.36 -0.37 16 21 C -0.12 -0.10 5.38 -104.67 -0.56 -0.66 16 22 C -0.07 0.11 2.78 36.00 0.10 0.21 16 23 O -0.55 0.81 12.81 -35.23 -0.45 0.36 16 24 Si 0.68 -1.52 29.84 -169.99 -5.07 -6.60 16 25 C -0.05 -0.07 8.65 -39.53 -0.34 -0.41 16 26 C -0.21 -0.29 9.03 -39.48 -0.36 -0.65 16 27 H 0.11 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 29 H 0.06 -0.08 7.66 -51.93 -0.40 -0.48 16 30 H 0.40 -0.98 6.72 -40.82 -0.27 -1.25 16 31 H 0.12 0.07 6.67 -52.49 -0.35 -0.28 16 32 H 0.12 0.01 8.06 -52.49 -0.42 -0.41 16 33 H 0.12 0.05 8.06 -52.49 -0.42 -0.37 16 34 H 0.12 0.17 8.06 -52.49 -0.42 -0.25 16 35 H 0.12 0.37 6.53 -52.49 -0.34 0.02 16 36 H 0.11 0.15 6.32 -51.93 -0.33 -0.18 16 37 H 0.09 0.30 7.15 -51.93 -0.37 -0.07 16 38 H 0.09 -0.26 8.10 -51.93 -0.42 -0.68 16 39 H 0.11 -0.11 7.73 -51.93 -0.40 -0.51 16 40 H 0.14 -0.29 6.41 -52.49 -0.34 -0.63 16 41 H 0.08 -0.27 7.96 -51.93 -0.41 -0.68 16 42 H 0.38 -2.41 8.74 45.56 0.40 -2.01 16 43 H -0.25 -0.23 7.04 56.52 0.40 0.17 16 44 H -0.25 -0.06 7.11 56.52 0.40 0.35 16 45 H 0.13 0.05 4.84 -52.48 -0.25 -0.21 16 46 H 0.14 -0.11 6.30 -52.49 -0.33 -0.45 16 LS Contribution 375.99 15.07 5.67 5.67 Total: 0.00 -9.84 375.99 -10.63 -20.47 By element: Atomic # 1 Polarization: -4.00 SS G_CDS: -5.53 Total: -9.53 kcal Atomic # 6 Polarization: 0.19 SS G_CDS: -4.49 Total: -4.31 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: -0.21 Total: -0.44 kcal Atomic # 8 Polarization: -3.72 SS G_CDS: -1.02 Total: -4.74 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.04 Total: -0.52 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.07 Total: -6.60 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -9.84 -10.63 -20.47 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.411 kcal (2) G-P(sol) polarization free energy of solvation -9.839 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.250 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.629 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.468 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.879 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds