Wall clock time and date at job start Sat Mar 6 2021 20:39:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35654 * 117.00092 * 2 1 4 4 C 1.40141 * 120.14570 * 179.97438 * 3 2 1 5 5 C 1.47534 * 120.19542 * 0.03055 * 4 3 2 6 6 O 1.21593 * 119.99598 * 359.97438 * 5 4 3 7 7 N 1.34768 * 120.00307 * 179.97438 * 5 4 3 8 8 C 1.46502 * 120.00266 * 184.99051 * 7 5 4 9 9 C 1.50703 * 112.90289 * 66.50670 * 8 7 5 10 10 C 1.38237 * 119.99762 * 191.11338 * 9 8 7 11 11 C 1.38234 * 120.00109 * 179.78554 * 10 9 8 12 12 C 1.38239 * 119.99709 * 0.44582 * 11 10 9 13 13 C 1.38235 * 120.00309 * 359.81455 * 12 11 10 14 14 C 1.38226 * 120.00154 * 11.39126 * 9 8 7 15 15 C 1.53773 * 113.61713 * 295.25556 * 8 7 5 16 16 C 1.53784 * 87.17437 * 270.92455 * 15 8 7 17 17 H 1.09001 * 113.61626 * 89.07509 * 16 15 8 18 18 F 1.39899 * 113.61271 * 219.97888 * 16 15 8 19 19 C 1.53777 * 87.07875 * 334.52537 * 16 15 8 20 20 C 1.39709 * 119.61271 * 180.29371 * 4 3 2 21 21 C 1.37785 * 119.90982 * 359.47993 * 20 4 3 22 22 C 1.50694 * 119.85239 * 180.25353 * 21 20 4 23 23 O 1.42902 * 109.47472 * 65.25200 * 22 21 20 24 24 Si 1.86308 * 109.47361 * 185.25389 * 22 21 20 25 25 C 1.38550 * 120.29894 * 0.50187 * 21 20 4 26 26 C 1.38059 * 120.38938 * 359.77116 * 25 21 20 27 27 H 1.08990 * 109.47671 * 179.97438 * 1 2 3 28 28 H 1.09003 * 109.47009 * 300.00476 * 1 2 3 29 29 H 1.09003 * 109.46926 * 59.99755 * 1 2 3 30 30 H 0.97006 * 119.99774 * 4.99692 * 7 5 4 31 31 H 1.08002 * 119.99666 * 0.02562 * 10 9 8 32 32 H 1.07998 * 120.00352 * 180.27903 * 11 10 9 33 33 H 1.07997 * 120.00045 * 179.82888 * 12 11 10 34 34 H 1.07993 * 120.00592 * 180.02562 * 13 12 11 35 35 H 1.08001 * 120.00478 * 359.97438 * 14 9 8 36 36 H 1.08999 * 113.61698 * 156.33240 * 15 8 7 37 37 H 1.09001 * 113.61292 * 25.51287 * 15 8 7 38 38 H 1.09003 * 113.61688 * 139.98076 * 19 16 15 39 39 H 1.08999 * 113.61530 * 270.79828 * 19 16 15 40 40 H 1.07998 * 120.04300 * 179.70316 * 20 4 3 41 41 H 1.09003 * 109.46801 * 305.25018 * 22 21 20 42 42 H 0.96699 * 114.00124 * 180.02562 * 23 22 21 43 43 H 1.48500 * 109.99398 * 299.99505 * 24 22 21 44 44 H 1.48494 * 110.00004 * 61.31555 * 24 22 21 45 45 H 1.08004 * 119.80626 * 179.74542 * 25 21 20 46 46 H 1.08000 * 119.95640 * 179.97438 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4442 1.2856 0.0005 5 6 4.2551 0.0530 0.0004 6 8 3.7094 -1.0336 0.0003 7 7 5.6005 0.1315 0.0004 8 6 6.4054 -1.0876 -0.1100 9 6 6.2587 -1.7681 -1.4467 10 6 6.7641 -3.0412 -1.6332 11 6 6.6257 -3.6672 -2.8579 12 6 5.9901 -3.0164 -3.8988 13 6 5.4895 -1.7412 -3.7139 14 6 5.6241 -1.1170 -2.4878 15 6 6.2480 -2.0403 1.0868 16 6 7.4037 -1.2737 1.7515 17 1 7.0773 -0.4175 2.3418 18 9 8.3013 -2.0983 2.4382 19 6 7.8690 -0.9030 0.3335 20 6 4.0669 2.5362 0.0068 21 6 3.3040 3.6836 0.0015 22 6 3.9770 5.0319 0.0024 23 8 4.7000 5.2043 -1.2181 24 14 2.6887 6.3690 0.1553 25 6 1.9208 3.6033 0.0005 26 6 1.2926 2.3739 0.0000 27 1 -0.3634 -1.0275 -0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 6.0359 0.9952 0.0737 31 1 7.2636 -3.5483 -0.8209 32 1 7.0165 -4.6636 -3.0023 33 1 5.8845 -3.5044 -4.8565 34 1 4.9926 -1.2330 -4.5270 35 1 5.2328 -0.1208 -2.3433 36 1 6.4889 -3.0775 0.8539 37 1 5.2965 -1.9334 1.6077 38 1 8.2259 0.1232 0.2453 39 1 8.5543 -1.6285 -0.1049 40 1 5.1447 2.6035 0.0121 41 1 4.6661 5.0933 0.8447 42 1 5.1597 6.0522 -1.2865 43 1 1.7430 6.2959 -0.9873 44 1 1.9512 6.2197 1.4354 45 1 1.3306 4.5078 0.0005 46 1 0.2139 2.3195 -0.0003 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:39:01 Heat of formation + Delta-G solvation = -48.482973 kcal Electronic energy + Delta-G solvation = -32729.260456 eV Core-core repulsion = 28273.924916 eV Total energy + Delta-G solvation = -4455.335540 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -48.63468 -42.23482 -41.32843 -39.61742 -39.18601 -38.48229 -37.17861 -34.60587 -32.69489 -32.07544 -31.87688 -31.66619 -28.66951 -27.15833 -26.38114 -26.15049 -25.07550 -23.64183 -22.90654 -22.43287 -21.56729 -20.40527 -19.58822 -18.62727 -18.45034 -18.21961 -17.73654 -17.34253 -16.95754 -16.85063 -16.63039 -16.28401 -16.12953 -15.97111 -15.74927 -15.67405 -15.50772 -15.23127 -14.85284 -14.57565 -14.36565 -14.18158 -14.04217 -13.97169 -13.92404 -13.62901 -13.54999 -13.31921 -13.02392 -12.63909 -12.53117 -12.37501 -12.32605 -12.18302 -11.98922 -11.93164 -11.71186 -11.46587 -10.97837 -10.42945 -10.27347 -10.22913 -9.88820 -9.64911 -9.41913 -4.92926 -0.43822 0.07197 0.33672 0.43009 1.31915 1.61852 1.67560 1.84430 1.97471 2.12823 2.53096 2.70007 3.14989 3.20998 3.29738 3.37752 3.40504 3.49641 3.59173 3.73395 3.78817 3.90637 3.94873 4.02030 4.05897 4.15318 4.16496 4.20711 4.22075 4.25031 4.44297 4.48334 4.55362 4.56135 4.56924 4.60486 4.64595 4.68764 4.77424 4.83333 4.90457 4.98125 5.00715 5.10701 5.12969 5.32327 5.39535 5.49558 5.55970 5.65366 6.02837 6.14805 6.40625 6.95375 7.14057 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.307 6.307 3 C 0.173 3.827 4 C -0.191 4.191 5 C 0.566 3.434 6 O -0.539 6.539 7 N -0.699 5.699 8 C 0.197 3.803 9 C -0.079 4.079 10 C -0.121 4.121 11 C -0.124 4.124 12 C -0.129 4.129 13 C -0.132 4.132 14 C -0.116 4.116 15 C -0.161 4.161 16 C 0.068 3.932 17 H 0.128 0.872 18 F -0.217 7.217 19 C -0.137 4.137 20 C -0.011 4.011 21 C -0.133 4.133 22 C -0.067 4.067 23 O -0.562 6.562 24 Si 0.762 3.238 25 C -0.065 4.065 26 C -0.215 4.215 27 H 0.112 0.888 28 H 0.071 0.929 29 H 0.068 0.932 30 H 0.417 0.583 31 H 0.136 0.864 32 H 0.142 0.858 33 H 0.138 0.862 34 H 0.129 0.871 35 H 0.111 0.889 36 H 0.103 0.897 37 H 0.071 0.929 38 H 0.117 0.883 39 H 0.115 0.885 40 H 0.164 0.836 41 H 0.104 0.896 42 H 0.405 0.595 43 H -0.298 1.298 44 H -0.289 1.289 45 H 0.129 0.871 46 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.256 8.061 0.251 8.375 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.218 6.218 3 C 0.125 3.875 4 C -0.195 4.195 5 C 0.354 3.646 6 O -0.416 6.416 7 N -0.354 5.354 8 C 0.109 3.891 9 C -0.080 4.080 10 C -0.140 4.140 11 C -0.142 4.142 12 C -0.147 4.147 13 C -0.150 4.150 14 C -0.134 4.134 15 C -0.199 4.199 16 C 0.032 3.968 17 H 0.146 0.854 18 F -0.198 7.198 19 C -0.174 4.174 20 C -0.030 4.030 21 C -0.134 4.134 22 C -0.178 4.178 23 O -0.372 6.372 24 Si 0.669 3.331 25 C -0.083 4.083 26 C -0.233 4.233 27 H 0.130 0.870 28 H 0.090 0.910 29 H 0.087 0.913 30 H 0.256 0.744 31 H 0.154 0.846 32 H 0.160 0.840 33 H 0.156 0.844 34 H 0.146 0.854 35 H 0.129 0.871 36 H 0.121 0.879 37 H 0.090 0.910 38 H 0.135 0.865 39 H 0.133 0.867 40 H 0.182 0.818 41 H 0.122 0.878 42 H 0.256 0.744 43 H -0.226 1.226 44 H -0.216 1.216 45 H 0.146 0.854 46 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 0.889 6.664 0.235 6.727 hybrid contribution -0.599 -0.256 0.012 0.651 sum 0.290 6.408 0.247 6.420 Atomic orbital electron populations 1.23439 0.76656 1.05611 1.02568 1.86342 1.23045 1.25911 1.86501 1.19323 0.91517 0.85220 0.91483 1.19473 0.90889 0.94288 1.14814 1.18041 0.82220 0.88407 0.75938 1.90851 1.72177 1.29787 1.48782 1.45416 1.04875 1.09543 1.75574 1.19650 0.92508 0.85618 0.91275 1.19748 0.98911 0.95068 0.94289 1.21149 1.00411 0.94172 0.98220 1.21429 0.99054 1.00755 0.92970 1.21450 0.98198 0.95017 1.00057 1.21368 1.00111 0.96034 0.97531 1.20989 0.99022 1.00051 0.93373 1.24041 0.99432 1.00294 0.96148 1.23264 0.88156 0.93223 0.92122 0.85445 1.92798 1.70067 1.74765 1.82168 1.24002 0.93549 1.06319 0.93564 1.21209 1.01147 0.88709 0.91898 1.19512 0.92809 0.95547 1.05499 1.24624 1.03722 0.98472 0.90944 1.86445 1.69576 1.44270 1.36957 0.94335 0.77682 0.84949 0.76128 1.21111 0.94596 0.97282 0.95277 1.21361 1.01605 0.91068 1.09309 0.87011 0.91030 0.91298 0.74367 0.84649 0.84006 0.84408 0.85353 0.87063 0.87890 0.91020 0.86485 0.86686 0.81831 0.87817 0.74399 1.22573 1.21582 0.85383 0.82624 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.01 9.81 113.37 1.11 1.13 16 2 O -0.31 -3.15 8.57 -68.77 -0.59 -3.74 16 3 C 0.17 1.37 6.70 22.84 0.15 1.52 16 4 C -0.19 -1.17 5.89 -20.01 -0.12 -1.29 16 5 C 0.57 4.49 6.00 86.70 0.52 5.01 16 6 O -0.54 -8.76 13.54 16.91 0.23 -8.53 16 7 N -0.70 -0.46 4.29 -426.65 -1.83 -2.29 16 8 C 0.20 0.36 0.95 3.47 0.00 0.37 16 9 C -0.08 -0.46 4.83 -19.87 -0.10 -0.56 16 10 C -0.12 -0.58 8.62 22.27 0.19 -0.39 16 11 C -0.12 -0.53 10.05 22.27 0.22 -0.30 16 12 C -0.13 -0.64 10.05 22.27 0.22 -0.42 16 13 C -0.13 -0.90 10.05 22.27 0.22 -0.67 16 14 C -0.12 -0.90 8.80 22.27 0.20 -0.71 16 15 C -0.16 -0.63 6.64 31.12 0.21 -0.42 16 16 C 0.07 -0.02 5.58 31.12 0.17 0.15 16 17 H 0.13 -0.50 8.14 -2.39 -0.02 -0.52 16 18 F -0.22 -1.12 17.41 44.97 0.78 -0.34 16 19 C -0.14 0.45 7.18 31.21 0.22 0.68 16 20 C -0.01 -0.01 9.16 22.52 0.21 0.20 16 21 C -0.13 -0.14 5.38 -19.90 -0.11 -0.25 16 22 C -0.07 0.34 2.78 71.23 0.20 0.54 16 23 O -0.56 2.78 12.81 -148.98 -1.91 0.87 16 24 Si 0.76 -3.76 29.84 68.60 2.05 -1.72 16 25 C -0.06 -0.20 8.65 22.30 0.19 0.00 16 26 C -0.21 -0.82 9.03 22.34 0.20 -0.62 16 27 H 0.11 -0.07 8.14 -2.39 -0.02 -0.09 16 28 H 0.07 -0.15 7.66 -2.39 -0.02 -0.16 16 29 H 0.07 -0.10 7.66 -2.39 -0.02 -0.12 16 30 H 0.42 -2.55 6.72 -92.70 -0.62 -3.17 16 31 H 0.14 0.19 6.67 -2.91 -0.02 0.17 16 32 H 0.14 -0.03 8.06 -2.91 -0.02 -0.06 16 33 H 0.14 0.11 8.06 -2.91 -0.02 0.08 16 34 H 0.13 0.50 8.06 -2.91 -0.02 0.48 16 35 H 0.11 0.85 6.53 -2.91 -0.02 0.83 16 36 H 0.10 0.43 6.32 -2.39 -0.02 0.41 16 37 H 0.07 0.61 7.15 -2.39 -0.02 0.59 16 38 H 0.12 -1.00 8.10 -2.39 -0.02 -1.02 16 39 H 0.11 -0.36 7.73 -2.39 -0.02 -0.38 16 40 H 0.16 -1.02 6.41 -2.91 -0.02 -1.04 16 41 H 0.10 -1.06 7.96 -2.39 -0.02 -1.08 16 42 H 0.40 -6.07 8.74 -74.06 -0.65 -6.71 16 43 H -0.30 -0.86 7.04 99.48 0.70 -0.15 16 44 H -0.29 -0.21 7.11 99.48 0.71 0.50 16 45 H 0.13 0.20 4.84 -2.91 -0.01 0.18 16 46 H 0.16 -0.11 6.30 -2.91 -0.02 -0.13 16 Total: 0.00 -25.63 375.99 2.48 -23.15 By element: Atomic # 1 Polarization: -11.19 SS G_CDS: -0.19 Total: -11.38 kcal Atomic # 6 Polarization: 0.04 SS G_CDS: 3.93 Total: 3.97 kcal Atomic # 7 Polarization: -0.46 SS G_CDS: -1.83 Total: -2.29 kcal Atomic # 8 Polarization: -9.12 SS G_CDS: -2.27 Total: -11.39 kcal Atomic # 9 Polarization: -1.12 SS G_CDS: 0.78 Total: -0.34 kcal Atomic # 14 Polarization: -3.76 SS G_CDS: 2.05 Total: -1.72 kcal Total: -25.63 2.48 -23.15 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.331 kcal (2) G-P(sol) polarization free energy of solvation -25.629 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.960 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.477 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.152 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.483 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds