Wall clock time and date at job start Sat Mar 6 2021 20:39:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86303 * 109.47360 * 2 1 4 4 C 1.50704 * 109.46912 * 240.00493 * 2 1 3 5 5 C 1.38894 * 119.67704 * 120.00030 * 4 2 1 6 6 C 1.36474 * 120.61221 * 180.02562 * 5 4 2 7 7 C 1.40063 * 119.83598 * 359.97438 * 6 5 4 8 8 C 1.41586 * 133.38575 * 179.97438 * 7 6 5 9 9 C 1.35863 * 107.72972 * 180.02562 * 8 7 6 10 10 C 1.47056 * 125.42921 * 180.02562 * 9 8 7 11 11 O 1.21652 * 120.00234 * 0.02562 * 10 9 8 12 12 N 1.34783 * 120.00124 * 179.74958 * 10 9 8 13 13 C 1.46495 * 119.99778 * 175.53905 * 12 10 9 14 14 C 1.50701 * 112.85202 * 72.66101 * 13 12 10 15 15 C 1.38228 * 120.00197 * 192.95787 * 14 13 12 16 16 C 1.38239 * 120.00012 * 179.76591 * 15 14 13 17 17 C 1.38234 * 119.99889 * 0.49224 * 16 15 14 18 18 C 1.38235 * 119.99924 * 359.78796 * 17 16 15 19 19 C 1.38234 * 119.99572 * 13.23610 * 14 13 12 20 20 C 1.53786 * 113.61871 * 301.46263 * 13 12 10 21 21 C 1.53781 * 87.08263 * 270.88722 * 20 13 12 22 22 H 1.08999 * 113.61366 * 89.19648 * 21 20 13 23 23 F 1.39899 * 113.61431 * 220.01605 * 21 20 13 24 24 C 1.53776 * 87.08090 * 334.56672 * 21 20 13 25 25 N 1.38153 * 109.14592 * 0.26622 * 9 8 7 26 26 C 1.37488 * 108.78869 * 359.56165 * 25 9 8 27 27 C 1.37711 * 119.67126 * 299.97875 * 4 2 1 28 28 H 0.96700 * 114.00465 * 59.99544 * 1 2 3 29 29 H 1.09001 * 109.47434 * 120.00717 * 2 1 3 30 30 H 1.48504 * 109.99410 * 60.00258 * 3 2 1 31 31 H 1.48499 * 110.00178 * 181.32095 * 3 2 1 32 32 H 1.07998 * 119.68960 * 359.97438 * 5 4 2 33 33 H 1.08005 * 120.08417 * 179.97438 * 6 5 4 34 34 H 1.07998 * 126.13731 * 0.02662 * 8 7 6 35 35 H 0.96991 * 119.99803 * 355.54075 * 12 10 9 36 36 H 1.08002 * 120.00063 * 0.02562 * 15 14 13 37 37 H 1.08002 * 120.00259 * 180.25442 * 16 15 14 38 38 H 1.07994 * 120.00085 * 179.76543 * 17 16 15 39 39 H 1.08002 * 120.00142 * 179.97438 * 18 17 16 40 40 H 1.07994 * 120.00448 * 0.02562 * 19 14 13 41 41 H 1.08997 * 113.60858 * 25.43730 * 20 13 12 42 42 H 1.09001 * 113.61273 * 156.25185 * 20 13 12 43 43 H 1.09004 * 113.61538 * 270.88796 * 24 21 20 44 44 H 1.08994 * 113.61622 * 139.98421 * 24 21 20 45 45 H 0.96998 * 125.60314 * 179.70637 * 25 9 8 46 46 H 1.08002 * 120.09802 * 359.97182 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.7294 -0.0288 -2.1404 6 6 3.1942 -0.6533 -3.2613 7 6 2.8658 -1.9939 -3.4991 8 6 3.1798 -2.9026 -4.5385 9 6 2.5822 -4.0874 -4.2469 10 6 2.6551 -5.3042 -5.0694 11 8 3.2916 -5.3004 -6.1062 12 7 2.0214 -6.4254 -4.6719 13 6 2.0121 -7.6074 -5.5372 14 6 3.3479 -8.3028 -5.5925 15 6 3.5875 -9.2638 -6.5568 16 6 4.8145 -9.8982 -6.6105 17 6 5.7984 -9.5790 -5.6935 18 6 5.5568 -8.6221 -4.7255 19 6 4.3316 -7.9838 -4.6752 20 6 1.3925 -7.3527 -6.9215 21 6 0.0388 -7.7322 -6.2985 22 1 -0.4944 -6.8866 -5.8641 23 9 -0.7667 -8.5088 -7.1384 24 6 0.8318 -8.5566 -5.2707 25 7 1.8905 -3.9653 -3.0572 26 6 2.0567 -2.6875 -2.5775 27 6 1.5948 -2.0289 -1.4416 28 1 -0.3934 0.4417 -0.7650 29 1 1.7924 -0.5139 0.8899 30 1 1.5615 2.4678 1.2086 31 1 3.5346 1.7703 -0.0322 32 1 2.9837 1.0051 -1.9594 33 1 3.8139 -0.1150 -3.9633 34 1 3.7856 -2.6918 -5.4073 35 1 1.5716 -6.4495 -3.8129 36 1 2.8175 -9.5159 -7.2709 37 1 5.0032 -10.6461 -7.3665 38 1 6.7557 -10.0773 -5.7330 39 1 6.3253 -8.3729 -4.0088 40 1 4.1428 -7.2365 -3.9187 41 1 1.4499 -6.3121 -7.2407 42 1 1.7331 -8.0497 -7.6872 43 1 1.0180 -9.5836 -5.5849 44 1 0.4365 -8.4879 -4.2573 45 1 1.3744 -4.6664 -2.6296 46 1 0.9743 -2.5505 -0.7279 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:39:31 Heat of formation + Delta-G solvation = 12.235076 kcal Electronic energy + Delta-G solvation = -32289.293227 eV Core-core repulsion = 27833.394620 eV Total energy + Delta-G solvation = -4455.898607 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.137 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -48.63163 -42.83133 -41.85920 -39.88591 -39.05600 -38.48522 -36.94838 -34.60395 -33.31616 -32.03370 -31.77832 -31.07053 -30.46264 -27.39331 -27.22978 -25.92547 -24.48515 -23.59166 -23.23070 -22.53551 -22.07870 -21.34596 -20.51820 -19.69592 -18.67703 -18.47800 -17.80918 -17.44510 -17.16476 -16.80824 -16.67702 -16.43847 -16.15140 -15.99032 -15.81815 -15.67703 -15.55801 -15.30210 -15.03140 -14.87094 -14.68133 -14.51699 -14.37844 -14.12004 -14.02110 -13.93519 -13.72893 -13.42171 -13.17020 -12.68376 -12.63794 -12.58265 -12.35180 -12.00638 -11.99002 -11.84642 -11.69225 -11.60234 -11.25526 -10.99419 -10.50431 -10.46660 -9.84279 -9.64730 -9.38324 -8.88970 -5.04136 -0.40765 0.35709 0.46563 0.47754 0.93142 1.25806 1.58985 1.62892 1.74764 1.96787 2.16029 2.68143 2.72452 2.99865 3.11383 3.31006 3.32034 3.39082 3.52475 3.57836 3.63000 3.65312 3.92945 3.95383 4.01344 4.08386 4.18710 4.19808 4.23568 4.36058 4.38210 4.41989 4.42259 4.43311 4.54228 4.56793 4.60342 4.77734 4.83633 4.87674 4.91102 4.99609 5.09382 5.18050 5.27005 5.34331 5.46633 5.52465 5.54713 5.60388 5.63179 5.89701 6.03916 6.07547 6.23574 6.51909 6.88375 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.068 4.068 3 Si 0.693 3.307 4 C -0.087 4.087 5 C -0.146 4.146 6 C -0.050 4.050 7 C -0.117 4.117 8 C -0.096 4.096 9 C 0.011 3.989 10 C 0.587 3.413 11 O -0.497 6.497 12 N -0.714 5.714 13 C 0.197 3.803 14 C -0.075 4.075 15 C -0.110 4.110 16 C -0.115 4.115 17 C -0.117 4.117 18 C -0.117 4.117 19 C -0.101 4.101 20 C -0.154 4.154 21 C 0.067 3.933 22 H 0.110 0.890 23 F -0.201 7.201 24 C -0.151 4.151 25 N -0.579 5.579 26 C 0.117 3.883 27 C -0.105 4.105 28 H 0.380 0.620 29 H 0.114 0.886 30 H -0.256 1.256 31 H -0.257 1.257 32 H 0.130 0.870 33 H 0.132 0.868 34 H 0.159 0.841 35 H 0.400 0.600 36 H 0.124 0.876 37 H 0.125 0.875 38 H 0.123 0.877 39 H 0.122 0.878 40 H 0.114 0.886 41 H 0.094 0.906 42 H 0.110 0.890 43 H 0.115 0.885 44 H 0.089 0.911 45 H 0.417 0.583 46 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.327 0.515 1.380 1.982 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.595 3.405 4 C -0.089 4.089 5 C -0.165 4.165 6 C -0.068 4.068 7 C -0.122 4.122 8 C -0.123 4.123 9 C -0.098 4.098 10 C 0.374 3.626 11 O -0.370 6.370 12 N -0.367 5.367 13 C 0.110 3.890 14 C -0.076 4.076 15 C -0.129 4.129 16 C -0.133 4.133 17 C -0.135 4.135 18 C -0.135 4.135 19 C -0.119 4.119 20 C -0.193 4.193 21 C 0.031 3.969 22 H 0.128 0.872 23 F -0.182 7.182 24 C -0.189 4.189 25 N -0.184 5.184 26 C 0.007 3.993 27 C -0.125 4.125 28 H 0.227 0.773 29 H 0.131 0.869 30 H -0.181 1.181 31 H -0.182 1.182 32 H 0.147 0.853 33 H 0.150 0.850 34 H 0.176 0.824 35 H 0.235 0.765 36 H 0.142 0.858 37 H 0.143 0.857 38 H 0.141 0.859 39 H 0.140 0.860 40 H 0.132 0.868 41 H 0.113 0.887 42 H 0.129 0.871 43 H 0.133 0.867 44 H 0.108 0.892 45 H 0.255 0.745 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -0.388 0.633 1.567 1.734 hybrid contribution -0.343 -1.063 0.866 1.413 sum -0.731 -0.429 2.433 2.576 Atomic orbital electron populations 1.86499 1.17050 1.81704 1.49357 1.25082 0.85259 1.10303 0.97280 0.94551 0.81087 0.77856 0.87037 1.20048 0.98227 0.93811 0.96776 1.20497 1.00862 0.99761 0.95344 1.20391 0.97676 0.92083 0.96693 1.18215 1.02793 0.94915 0.96244 1.20981 1.01374 0.90304 0.99646 1.20039 1.03653 0.96413 0.89712 1.17177 0.79079 0.81323 0.85047 1.90920 1.39502 1.83338 1.23268 1.45564 1.57123 1.11934 1.22031 1.19640 0.92273 0.85034 0.92023 1.19536 0.94413 0.97060 0.96637 1.20929 0.97611 0.96391 0.97928 1.21149 0.93306 0.99857 0.99012 1.21219 0.99366 0.97737 0.95224 1.21157 0.96920 0.96627 0.98837 1.20846 0.93281 0.99221 0.98566 1.24055 0.93425 1.05309 0.96481 1.23110 0.89494 0.93634 0.90708 0.87247 1.92838 1.75693 1.76625 1.72995 1.24013 0.93750 1.00171 1.00962 1.41888 1.45173 1.11336 1.20015 1.18303 0.99937 0.84634 0.96418 1.19860 1.02622 0.94145 0.95903 0.77260 0.86858 1.18111 1.18191 0.85311 0.84977 0.82375 0.76509 0.85782 0.85681 0.85889 0.86029 0.86807 0.88740 0.87136 0.86685 0.89244 0.74527 0.85510 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.31 12.76 -35.23 -0.45 -0.14 16 2 C -0.07 0.07 2.81 36.01 0.10 0.17 16 3 Si 0.69 -1.09 29.75 -169.99 -5.06 -6.15 16 4 C -0.09 0.04 5.40 -104.57 -0.56 -0.52 16 5 C -0.15 0.13 8.59 -39.97 -0.34 -0.22 16 6 C -0.05 0.01 10.06 -39.53 -0.40 -0.38 16 7 C -0.12 -0.11 6.16 -106.93 -0.66 -0.77 16 8 C -0.10 -0.11 10.53 -39.16 -0.41 -0.52 16 9 C 0.01 0.00 6.96 -82.29 -0.57 -0.57 16 10 C 0.59 0.47 6.48 -12.68 -0.08 0.39 16 11 O -0.50 -2.20 15.31 5.23 0.08 -2.12 16 12 N -0.71 1.40 4.12 -49.10 -0.20 1.20 16 13 C 0.20 -0.18 0.94 -132.16 -0.12 -0.30 16 14 C -0.08 -0.07 4.86 -104.63 -0.51 -0.58 16 15 C -0.11 -0.09 8.70 -39.58 -0.34 -0.43 16 16 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 17 C -0.12 -0.12 10.05 -39.58 -0.40 -0.52 16 18 C -0.12 -0.16 10.05 -39.58 -0.40 -0.56 16 19 C -0.10 -0.15 9.05 -39.58 -0.36 -0.51 16 20 C -0.15 0.01 6.61 -25.92 -0.17 -0.16 16 21 C 0.07 -0.08 5.58 -25.92 -0.14 -0.22 16 22 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 23 F -0.20 -0.35 17.41 2.25 0.04 -0.31 16 24 C -0.15 0.36 7.20 -25.92 -0.19 0.18 16 25 N -0.58 0.95 6.08 -7.35 -0.04 0.91 16 26 C 0.12 0.02 7.25 -83.97 -0.61 -0.59 16 27 C -0.10 0.02 9.61 -39.42 -0.38 -0.36 16 28 H 0.38 -1.62 8.70 45.56 0.40 -1.23 16 29 H 0.11 -0.07 7.96 -51.93 -0.41 -0.48 16 30 H -0.26 -0.46 7.11 56.52 0.40 -0.05 16 31 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 32 H 0.13 -0.34 4.82 -52.49 -0.25 -0.59 16 33 H 0.13 -0.29 8.06 -52.48 -0.42 -0.71 16 34 H 0.16 0.11 8.06 -52.49 -0.42 -0.32 16 35 H 0.40 -1.95 7.79 -40.82 -0.32 -2.27 16 36 H 0.12 -0.09 6.56 -52.49 -0.34 -0.44 16 37 H 0.13 -0.12 8.06 -52.49 -0.42 -0.54 16 38 H 0.12 -0.08 8.06 -52.49 -0.42 -0.51 16 39 H 0.12 -0.01 8.06 -52.49 -0.42 -0.43 16 40 H 0.11 0.09 6.86 -52.49 -0.36 -0.27 16 41 H 0.09 0.13 6.93 -51.93 -0.36 -0.23 16 42 H 0.11 -0.01 6.23 -51.93 -0.32 -0.34 16 43 H 0.11 -0.25 7.79 -51.93 -0.40 -0.65 16 44 H 0.09 -0.38 8.11 -51.93 -0.42 -0.80 16 45 H 0.42 -1.97 8.13 -40.82 -0.33 -2.30 16 46 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 LS Contribution 382.93 15.07 5.77 5.77 Total: 0.00 -8.92 382.93 -12.10 -21.02 By element: Atomic # 1 Polarization: -7.92 SS G_CDS: -5.29 Total: -13.21 kcal Atomic # 6 Polarization: -0.02 SS G_CDS: -6.95 Total: -6.97 kcal Atomic # 7 Polarization: 2.35 SS G_CDS: -0.25 Total: 2.11 kcal Atomic # 8 Polarization: -1.89 SS G_CDS: -0.37 Total: -2.26 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.04 Total: -0.31 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.06 Total: -6.15 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -8.92 -12.10 -21.02 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.255 kcal (2) G-P(sol) polarization free energy of solvation -8.916 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.339 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.104 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.019 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.235 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds