Wall clock time and date at job start Sat Mar 6 2021 20:39:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86303 * 109.47360 * 2 1 4 4 C 1.50704 * 109.46912 * 240.00493 * 2 1 3 5 5 C 1.38894 * 119.67704 * 120.00030 * 4 2 1 6 6 C 1.36474 * 120.61221 * 180.02562 * 5 4 2 7 7 C 1.40063 * 119.83598 * 359.97438 * 6 5 4 8 8 C 1.41586 * 133.38575 * 179.97438 * 7 6 5 9 9 C 1.35863 * 107.72972 * 180.02562 * 8 7 6 10 10 C 1.47056 * 125.42921 * 180.02562 * 9 8 7 11 11 O 1.21652 * 120.00234 * 0.02562 * 10 9 8 12 12 N 1.34783 * 120.00124 * 179.74958 * 10 9 8 13 13 C 1.46495 * 119.99778 * 175.53905 * 12 10 9 14 14 C 1.50701 * 112.85202 * 72.66101 * 13 12 10 15 15 C 1.38228 * 120.00197 * 192.95787 * 14 13 12 16 16 C 1.38239 * 120.00012 * 179.76591 * 15 14 13 17 17 C 1.38234 * 119.99889 * 0.49224 * 16 15 14 18 18 C 1.38235 * 119.99924 * 359.78796 * 17 16 15 19 19 C 1.38234 * 119.99572 * 13.23610 * 14 13 12 20 20 C 1.53786 * 113.61871 * 301.46263 * 13 12 10 21 21 C 1.53781 * 87.08263 * 270.88722 * 20 13 12 22 22 H 1.08999 * 113.61366 * 89.19648 * 21 20 13 23 23 F 1.39899 * 113.61431 * 220.01605 * 21 20 13 24 24 C 1.53776 * 87.08090 * 334.56672 * 21 20 13 25 25 N 1.38153 * 109.14592 * 0.26622 * 9 8 7 26 26 C 1.37488 * 108.78869 * 359.56165 * 25 9 8 27 27 C 1.37711 * 119.67126 * 299.97875 * 4 2 1 28 28 H 0.96700 * 114.00465 * 59.99544 * 1 2 3 29 29 H 1.09001 * 109.47434 * 120.00717 * 2 1 3 30 30 H 1.48504 * 109.99410 * 60.00258 * 3 2 1 31 31 H 1.48499 * 110.00178 * 181.32095 * 3 2 1 32 32 H 1.07998 * 119.68960 * 359.97438 * 5 4 2 33 33 H 1.08005 * 120.08417 * 179.97438 * 6 5 4 34 34 H 1.07998 * 126.13731 * 0.02662 * 8 7 6 35 35 H 0.96991 * 119.99803 * 355.54075 * 12 10 9 36 36 H 1.08002 * 120.00063 * 0.02562 * 15 14 13 37 37 H 1.08002 * 120.00259 * 180.25442 * 16 15 14 38 38 H 1.07994 * 120.00085 * 179.76543 * 17 16 15 39 39 H 1.08002 * 120.00142 * 179.97438 * 18 17 16 40 40 H 1.07994 * 120.00448 * 0.02562 * 19 14 13 41 41 H 1.08997 * 113.60858 * 25.43730 * 20 13 12 42 42 H 1.09001 * 113.61273 * 156.25185 * 20 13 12 43 43 H 1.09004 * 113.61538 * 270.88796 * 24 21 20 44 44 H 1.08994 * 113.61622 * 139.98421 * 24 21 20 45 45 H 0.96998 * 125.60314 * 179.70637 * 25 9 8 46 46 H 1.08002 * 120.09802 * 359.97182 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.7294 -0.0288 -2.1404 6 6 3.1942 -0.6533 -3.2613 7 6 2.8658 -1.9939 -3.4991 8 6 3.1798 -2.9026 -4.5385 9 6 2.5822 -4.0874 -4.2469 10 6 2.6551 -5.3042 -5.0694 11 8 3.2916 -5.3004 -6.1062 12 7 2.0214 -6.4254 -4.6719 13 6 2.0121 -7.6074 -5.5372 14 6 3.3479 -8.3028 -5.5925 15 6 3.5875 -9.2638 -6.5568 16 6 4.8145 -9.8982 -6.6105 17 6 5.7984 -9.5790 -5.6935 18 6 5.5568 -8.6221 -4.7255 19 6 4.3316 -7.9838 -4.6752 20 6 1.3925 -7.3527 -6.9215 21 6 0.0388 -7.7322 -6.2985 22 1 -0.4944 -6.8866 -5.8641 23 9 -0.7667 -8.5088 -7.1384 24 6 0.8318 -8.5566 -5.2707 25 7 1.8905 -3.9653 -3.0572 26 6 2.0567 -2.6875 -2.5775 27 6 1.5948 -2.0289 -1.4416 28 1 -0.3934 0.4417 -0.7650 29 1 1.7924 -0.5139 0.8899 30 1 1.5615 2.4678 1.2086 31 1 3.5346 1.7703 -0.0322 32 1 2.9837 1.0051 -1.9594 33 1 3.8139 -0.1150 -3.9633 34 1 3.7856 -2.6918 -5.4073 35 1 1.5716 -6.4495 -3.8129 36 1 2.8175 -9.5159 -7.2709 37 1 5.0032 -10.6461 -7.3665 38 1 6.7557 -10.0773 -5.7330 39 1 6.3253 -8.3729 -4.0088 40 1 4.1428 -7.2365 -3.9187 41 1 1.4499 -6.3121 -7.2407 42 1 1.7331 -8.0497 -7.6872 43 1 1.0180 -9.5836 -5.5849 44 1 0.4365 -8.4879 -4.2573 45 1 1.3744 -4.6664 -2.6296 46 1 0.9743 -2.5505 -0.7279 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:39:30 Heat of formation + Delta-G solvation = 15.451141 kcal Electronic energy + Delta-G solvation = -32289.153768 eV Core-core repulsion = 27833.394620 eV Total energy + Delta-G solvation = -4455.759148 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.137 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -48.66276 -42.80660 -41.83829 -39.92229 -39.00938 -38.49894 -36.88123 -34.60778 -33.27559 -32.04754 -31.80574 -31.03703 -30.41156 -27.35758 -27.15268 -25.88646 -24.44942 -23.60051 -23.22243 -22.52671 -22.03445 -21.33158 -20.49874 -19.65470 -18.67857 -18.40463 -17.76082 -17.38892 -17.11986 -16.79466 -16.67451 -16.44005 -16.12509 -15.98693 -15.83938 -15.67731 -15.51982 -15.29695 -15.02827 -14.81974 -14.67388 -14.51244 -14.39793 -14.11814 -14.04420 -13.95798 -13.59542 -13.43514 -13.13279 -12.65825 -12.58298 -12.52237 -12.34184 -12.03410 -12.01090 -11.80509 -11.64603 -11.57335 -11.32909 -10.97616 -10.48101 -10.42013 -9.89650 -9.67758 -9.34481 -8.84827 -4.94462 -0.39665 0.31995 0.42266 0.51695 0.91830 1.34602 1.61038 1.68598 1.84400 2.01855 2.12688 2.67669 2.76455 3.09735 3.17185 3.36087 3.38452 3.51489 3.58553 3.69117 3.72581 3.75919 3.95138 4.00323 4.02919 4.10934 4.20334 4.24609 4.28784 4.44273 4.45491 4.49381 4.52691 4.54201 4.58588 4.61680 4.65041 4.78281 4.87050 4.91765 4.97657 4.98540 5.08117 5.23266 5.30586 5.39525 5.48825 5.52306 5.56039 5.56091 5.60062 5.96228 6.01841 6.17668 6.39372 6.79658 6.89016 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.070 4.070 3 Si 0.775 3.225 4 C -0.088 4.088 5 C -0.148 4.148 6 C -0.059 4.059 7 C -0.134 4.134 8 C -0.116 4.116 9 C 0.012 3.988 10 C 0.591 3.409 11 O -0.538 6.538 12 N -0.697 5.697 13 C 0.198 3.802 14 C -0.082 4.082 15 C -0.121 4.121 16 C -0.125 4.125 17 C -0.130 4.130 18 C -0.132 4.132 19 C -0.116 4.116 20 C -0.160 4.160 21 C 0.067 3.933 22 H 0.127 0.873 23 F -0.217 7.217 24 C -0.138 4.138 25 N -0.563 5.563 26 C 0.110 3.890 27 C -0.109 4.109 28 H 0.396 0.604 29 H 0.109 0.891 30 H -0.303 1.303 31 H -0.286 1.286 32 H 0.146 0.854 33 H 0.146 0.854 34 H 0.154 0.846 35 H 0.416 0.584 36 H 0.135 0.865 37 H 0.140 0.860 38 H 0.137 0.863 39 H 0.131 0.869 40 H 0.117 0.883 41 H 0.076 0.924 42 H 0.107 0.893 43 H 0.115 0.885 44 H 0.116 0.884 45 H 0.432 0.568 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.189 0.234 2.142 3.072 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.180 4.180 3 Si 0.682 3.318 4 C -0.091 4.091 5 C -0.166 4.166 6 C -0.077 4.077 7 C -0.139 4.139 8 C -0.143 4.143 9 C -0.098 4.098 10 C 0.378 3.622 11 O -0.414 6.414 12 N -0.349 5.349 13 C 0.111 3.889 14 C -0.084 4.084 15 C -0.139 4.139 16 C -0.143 4.143 17 C -0.147 4.147 18 C -0.150 4.150 19 C -0.134 4.134 20 C -0.199 4.199 21 C 0.031 3.969 22 H 0.144 0.856 23 F -0.198 7.198 24 C -0.176 4.176 25 N -0.170 5.170 26 C -0.001 4.001 27 C -0.130 4.130 28 H 0.246 0.754 29 H 0.127 0.873 30 H -0.231 1.231 31 H -0.213 1.213 32 H 0.163 0.837 33 H 0.164 0.836 34 H 0.171 0.829 35 H 0.254 0.746 36 H 0.153 0.847 37 H 0.158 0.842 38 H 0.155 0.845 39 H 0.149 0.851 40 H 0.135 0.865 41 H 0.095 0.905 42 H 0.125 0.875 43 H 0.133 0.867 44 H 0.134 0.866 45 H 0.273 0.727 46 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -1.298 0.314 2.345 2.699 hybrid contribution -0.058 -0.948 0.647 1.150 sum -1.356 -0.634 2.992 3.346 Atomic orbital electron populations 1.86464 1.17084 1.82131 1.50587 1.25137 0.85333 1.10598 0.96940 0.93585 0.77955 0.75576 0.84658 1.20153 0.98151 0.93873 0.96877 1.20689 1.00452 1.00513 0.94975 1.20633 0.97908 0.91902 0.97264 1.18418 1.03421 0.95601 0.96453 1.21081 1.02134 0.91086 1.00020 1.19908 1.03786 0.95936 0.90177 1.17221 0.78617 0.81879 0.84434 1.90902 1.41453 1.84024 1.25042 1.45390 1.56172 1.10903 1.22484 1.19626 0.92078 0.85399 0.91839 1.19750 0.95075 0.97094 0.96454 1.21159 0.98075 0.96485 0.98189 1.21432 0.93320 1.00179 0.99327 1.21467 1.00143 0.97887 0.95243 1.21393 0.97298 0.96917 0.99360 1.20994 0.93675 0.99596 0.99112 1.24061 0.94692 1.04146 0.96992 1.23283 0.88881 0.94213 0.90530 0.85557 1.92805 1.76131 1.77166 1.73712 1.23966 0.92122 0.99491 1.01999 1.41775 1.44634 1.11332 1.19220 1.18415 1.00023 0.85141 0.96519 1.19985 1.02770 0.94359 0.95888 0.75414 0.87313 1.23100 1.21301 0.83712 0.83590 0.82871 0.74562 0.84691 0.84181 0.84536 0.85125 0.86533 0.90485 0.87519 0.86682 0.86602 0.72746 0.84681 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.09 12.76 -148.98 -1.90 -0.81 16 2 C -0.07 0.17 2.81 71.24 0.20 0.37 16 3 Si 0.78 -2.60 29.75 68.60 2.04 -0.56 16 4 C -0.09 0.14 5.40 -19.83 -0.11 0.04 16 5 C -0.15 0.33 8.59 22.01 0.19 0.52 16 6 C -0.06 0.03 10.06 22.30 0.22 0.26 16 7 C -0.13 -0.30 6.16 -21.36 -0.13 -0.43 16 8 C -0.12 -0.40 10.53 22.54 0.24 -0.16 16 9 C 0.01 0.01 6.96 39.91 0.28 0.29 16 10 C 0.59 1.34 6.48 86.55 0.56 1.90 16 11 O -0.54 -5.63 15.31 -4.20 -0.06 -5.69 16 12 N -0.70 2.95 4.12 -427.47 -1.76 1.19 16 13 C 0.20 -0.38 0.94 3.39 0.00 -0.38 16 14 C -0.08 -0.19 4.86 -19.87 -0.10 -0.29 16 15 C -0.12 -0.25 8.70 22.27 0.19 -0.05 16 16 C -0.12 -0.25 10.05 22.27 0.22 -0.02 16 17 C -0.13 -0.33 10.05 22.27 0.22 -0.10 16 18 C -0.13 -0.46 10.05 22.27 0.22 -0.23 16 19 C -0.12 -0.42 9.05 22.27 0.20 -0.22 16 20 C -0.16 -0.07 6.61 31.12 0.21 0.13 16 21 C 0.07 -0.19 5.58 31.12 0.17 -0.01 16 22 H 0.13 -0.80 8.14 -2.39 -0.02 -0.82 16 23 F -0.22 -0.72 17.41 44.97 0.78 0.06 16 24 C -0.14 0.83 7.20 31.12 0.22 1.05 16 25 N -0.56 2.10 6.08 -177.18 -1.08 1.02 16 26 C 0.11 0.01 7.25 39.13 0.28 0.30 16 27 C -0.11 0.11 9.61 22.37 0.22 0.33 16 28 H 0.40 -3.82 8.70 -74.06 -0.64 -4.46 16 29 H 0.11 -0.17 7.96 -2.39 -0.02 -0.18 16 30 H -0.30 -1.37 7.11 99.48 0.71 -0.66 16 31 H -0.29 -0.42 7.11 99.48 0.71 0.28 16 32 H 0.15 -0.90 4.82 -2.91 -0.01 -0.91 16 33 H 0.15 -0.63 8.06 -2.91 -0.02 -0.65 16 34 H 0.15 0.53 8.06 -2.91 -0.02 0.50 16 35 H 0.42 -4.61 7.79 -92.72 -0.72 -5.33 16 36 H 0.14 -0.14 6.56 -2.91 -0.02 -0.16 16 37 H 0.14 -0.28 8.06 -2.91 -0.02 -0.30 16 38 H 0.14 -0.16 8.06 -2.91 -0.02 -0.19 16 39 H 0.13 0.07 8.06 -2.91 -0.02 0.04 16 40 H 0.12 0.24 6.86 -2.91 -0.02 0.22 16 41 H 0.08 0.32 6.93 -2.39 -0.02 0.31 16 42 H 0.11 0.09 6.23 -2.39 -0.01 0.08 16 43 H 0.11 -0.62 7.79 -2.38 -0.02 -0.63 16 44 H 0.12 -1.28 8.11 -2.39 -0.02 -1.30 16 45 H 0.43 -4.58 8.13 -92.71 -0.75 -5.34 16 46 H 0.14 -0.42 8.06 -2.91 -0.02 -0.44 16 Total: 0.00 -21.99 382.93 0.54 -21.45 By element: Atomic # 1 Polarization: -18.94 SS G_CDS: -1.01 Total: -19.94 kcal Atomic # 6 Polarization: -0.24 SS G_CDS: 3.53 Total: 3.29 kcal Atomic # 7 Polarization: 5.05 SS G_CDS: -2.84 Total: 2.21 kcal Atomic # 8 Polarization: -4.54 SS G_CDS: -1.96 Total: -6.50 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 0.78 Total: 0.06 kcal Atomic # 14 Polarization: -2.60 SS G_CDS: 2.04 Total: -0.56 kcal Total: -21.99 0.54 -21.45 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.899 kcal (2) G-P(sol) polarization free energy of solvation -21.986 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.912 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.447 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.451 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds