Wall clock time and date at job start Sat Mar 6 2021 20:39:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42910 * 1 3 3 Si 1.86306 * 109.46689 * 2 1 4 4 C 1.50697 * 109.47271 * 240.00232 * 2 1 3 5 5 C 1.34709 * 125.66115 * 299.99439 * 4 2 1 6 6 C 1.40974 * 107.02378 * 180.02562 * 5 4 2 7 7 C 1.35929 * 106.74429 * 0.02562 * 6 5 4 8 8 C 1.47821 * 125.93236 * 179.97438 * 7 6 5 9 9 C 1.39171 * 120.00093 * 180.02562 * 8 7 6 10 10 C 1.39465 * 119.75441 * 179.74187 * 9 8 7 11 11 C 1.47560 * 120.12194 * 180.23137 * 10 9 8 12 12 O 1.21585 * 120.00252 * 180.25458 * 11 10 9 13 13 N 1.34777 * 120.00256 * 0.26241 * 11 10 9 14 14 C 1.46497 * 120.00350 * 174.79326 * 13 11 10 15 15 C 1.50696 * 112.84708 * 76.03809 * 14 13 11 16 16 C 1.38239 * 119.99967 * 184.86349 * 15 14 13 17 17 C 1.38243 * 120.00230 * 179.76728 * 16 15 14 18 18 C 1.38230 * 119.99441 * 0.48011 * 17 16 15 19 19 C 1.38241 * 120.00625 * 359.78994 * 18 17 16 20 20 C 1.38233 * 120.00505 * 5.12899 * 15 14 13 21 21 C 1.53775 * 113.61458 * 304.83797 * 14 13 11 22 22 C 1.53775 * 87.08206 * 270.88366 * 21 14 13 23 23 H 1.09001 * 113.61674 * 89.11920 * 22 21 14 24 24 F 1.39907 * 113.61386 * 220.01853 * 22 21 14 25 25 C 1.53778 * 113.61419 * 207.33788 * 14 13 11 26 26 C 1.40208 * 119.75698 * 0.49332 * 10 9 8 27 27 O 1.35649 * 120.00395 * 179.76759 * 26 10 9 28 28 C 1.38826 * 119.99681 * 359.48653 * 26 10 9 29 29 C 1.37764 * 120.24164 * 0.27864 * 28 26 10 30 30 O 1.34341 * 125.66592 * 120.30945 * 4 2 1 31 31 H 0.96699 * 113.99476 * 60.00020 * 1 2 3 32 32 H 1.08997 * 109.47016 * 119.99488 * 2 1 3 33 33 H 1.48498 * 109.99832 * 60.00049 * 3 2 1 34 34 H 1.48501 * 109.99711 * 181.31721 * 3 2 1 35 35 H 1.07994 * 126.48949 * 0.05174 * 5 4 2 36 36 H 1.07997 * 126.62557 * 179.97438 * 6 5 4 37 37 H 1.07996 * 120.12234 * 359.97438 * 9 8 7 38 38 H 0.97008 * 119.99711 * 354.79019 * 13 11 10 39 39 H 1.08001 * 119.99950 * 359.97438 * 16 15 14 40 40 H 1.07991 * 119.99920 * 180.25132 * 17 16 15 41 41 H 1.08004 * 119.99787 * 179.77547 * 18 17 16 42 42 H 1.07997 * 119.99980 * 179.97438 * 19 18 17 43 43 H 1.08007 * 119.99962 * 0.02562 * 20 15 14 44 44 H 1.08995 * 113.61513 * 25.43619 * 21 14 13 45 45 H 1.09007 * 113.61285 * 156.33211 * 21 14 13 46 46 H 1.09002 * 113.62048 * 203.66511 * 25 14 13 47 47 H 1.08999 * 113.61730 * 334.57196 * 25 14 13 48 48 H 0.96703 * 114.00154 * 269.72352 * 27 26 10 49 49 H 1.07998 * 119.87726 * 180.25750 * 28 26 10 50 50 H 1.07998 * 119.87694 * 179.97438 * 29 28 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9315 -0.7103 -1.2305 5 6 1.6774 -1.9926 -1.5557 6 6 2.3355 -2.2470 -2.7762 7 6 2.9616 -1.0939 -3.1313 8 6 3.7793 -0.8892 -4.3456 9 6 4.3671 0.3487 -4.5882 10 6 5.1419 0.5346 -5.7328 11 6 5.7731 1.8423 -5.9955 12 8 6.4444 2.0033 -6.9964 13 7 5.6057 2.8582 -5.1258 14 6 6.3232 4.1196 -5.3261 15 6 5.7277 4.9638 -6.4232 16 6 6.3477 6.1388 -6.8051 17 6 5.8040 6.9108 -7.8148 18 6 4.6350 6.5128 -8.4357 19 6 4.0118 5.3406 -8.0501 20 6 4.5583 4.5661 -7.0439 21 6 7.8475 3.9503 -5.4376 22 6 7.8974 4.1030 -3.9083 23 1 7.7940 3.1599 -3.3716 24 9 8.9762 4.8710 -3.4567 25 6 6.5835 4.8938 -4.0231 26 6 5.3145 -0.5240 -6.6358 27 8 6.0632 -0.3474 -7.7531 28 6 4.7238 -1.7548 -6.3836 29 6 3.9624 -1.9397 -5.2504 30 8 2.7119 -0.1717 -2.1821 31 1 -0.3932 0.4417 -0.7651 32 1 1.7924 -0.5137 0.8900 33 1 1.5614 2.4679 1.2085 34 1 3.5346 1.7704 -0.0321 35 1 1.0819 -2.6931 -0.9891 36 1 2.3418 -3.1784 -3.3229 37 1 4.2268 1.1613 -3.8909 38 1 5.0100 2.7542 -4.3673 39 1 7.2588 6.4520 -6.3169 40 1 6.2907 7.8266 -8.1159 41 1 4.2082 7.1177 -9.2221 42 1 3.0982 5.0299 -8.5350 43 1 4.0713 3.6504 -6.7424 44 1 8.1528 2.9644 -5.7882 45 1 8.3390 4.7622 -5.9738 46 1 6.7294 5.9636 -4.1724 47 1 5.8684 4.6696 -3.2316 48 1 5.5597 -0.0409 -8.5197 49 1 4.8614 -2.5701 -7.0783 50 1 3.5053 -2.8995 -5.0602 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_13259648.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:39:40 Heat of formation + Delta-G solvation = -40.797079 kcal Electronic energy + Delta-G solvation = -39185.949319 eV Core-core repulsion = 34027.586451 eV Total energy + Delta-G solvation = -5158.362868 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.141 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -48.54776 -43.77907 -42.16220 -40.94222 -39.40258 -38.39848 -38.15871 -37.83727 -34.66724 -34.17539 -32.81922 -32.46408 -31.82156 -31.58380 -30.12299 -27.19792 -26.49421 -26.36919 -25.12304 -23.77934 -23.48024 -23.02097 -22.49281 -21.96622 -21.27248 -20.40045 -19.71040 -19.21239 -18.60458 -18.40016 -17.68322 -17.51045 -17.34584 -17.17829 -16.71340 -16.66585 -16.43015 -16.35817 -15.88716 -15.82676 -15.79268 -15.62284 -15.45662 -15.15630 -14.72769 -14.50919 -14.35474 -14.27755 -14.06859 -13.99426 -13.95430 -13.90021 -13.65108 -13.61373 -13.34171 -13.24773 -13.20244 -12.88657 -12.56254 -12.31215 -12.19484 -11.96456 -11.88770 -11.74286 -11.46985 -11.13236 -10.80171 -10.78874 -10.50450 -10.40020 -10.24578 -9.80324 -9.59425 -8.98533 -5.17383 -0.64499 -0.31719 0.40264 0.51686 0.69385 1.03770 1.34385 1.42183 1.67146 1.78875 1.82547 1.85529 2.53636 2.74156 3.00337 3.09229 3.12503 3.20394 3.21697 3.33322 3.40470 3.47285 3.59995 3.71199 3.80085 3.87935 3.90109 4.01948 4.06955 4.07549 4.14777 4.19999 4.24202 4.28913 4.45924 4.49509 4.50489 4.53968 4.54426 4.61138 4.68950 4.69126 4.75763 4.88500 4.92751 4.98795 5.01593 5.04501 5.07310 5.14204 5.31933 5.33649 5.36528 5.56382 5.63863 5.70685 5.90598 6.08118 6.28415 6.30324 6.59214 7.09922 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.028 4.028 3 Si 0.699 3.301 4 C -0.051 4.051 5 C -0.170 4.170 6 C -0.187 4.187 7 C 0.034 3.966 8 C -0.033 4.033 9 C -0.055 4.055 10 C -0.165 4.165 11 C 0.562 3.438 12 O -0.497 6.497 13 N -0.714 5.714 14 C 0.198 3.802 15 C -0.074 4.074 16 C -0.111 4.111 17 C -0.116 4.116 18 C -0.119 4.119 19 C -0.118 4.118 20 C -0.099 4.099 21 C -0.152 4.152 22 C 0.065 3.935 23 H 0.110 0.890 24 F -0.202 7.202 25 C -0.153 4.153 26 C 0.181 3.819 27 O -0.475 6.475 28 C -0.148 4.148 29 C -0.052 4.052 30 O -0.166 6.166 31 H 0.384 0.616 32 H 0.133 0.867 33 H -0.246 1.246 34 H -0.251 1.251 35 H 0.154 0.846 36 H 0.154 0.846 37 H 0.135 0.865 38 H 0.403 0.597 39 H 0.123 0.877 40 H 0.124 0.876 41 H 0.122 0.878 42 H 0.121 0.879 43 H 0.115 0.885 44 H 0.096 0.904 45 H 0.107 0.893 46 H 0.114 0.886 47 H 0.090 0.910 48 H 0.400 0.600 49 H 0.146 0.854 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.210 -0.386 -0.437 5.242 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.139 4.139 3 Si 0.599 3.401 4 C -0.100 4.100 5 C -0.189 4.189 6 C -0.206 4.206 7 C -0.016 4.016 8 C -0.033 4.033 9 C -0.074 4.074 10 C -0.169 4.169 11 C 0.349 3.651 12 O -0.371 6.371 13 N -0.368 5.368 14 C 0.111 3.889 15 C -0.075 4.075 16 C -0.130 4.130 17 C -0.134 4.134 18 C -0.137 4.137 19 C -0.137 4.137 20 C -0.117 4.117 21 C -0.191 4.191 22 C 0.029 3.971 23 H 0.127 0.873 24 F -0.183 7.183 25 C -0.191 4.191 26 C 0.134 3.866 27 O -0.286 6.286 28 C -0.167 4.167 29 C -0.070 4.070 30 O -0.063 6.063 31 H 0.232 0.768 32 H 0.150 0.850 33 H -0.170 1.170 34 H -0.176 1.176 35 H 0.172 0.828 36 H 0.172 0.828 37 H 0.153 0.847 38 H 0.240 0.760 39 H 0.141 0.859 40 H 0.142 0.858 41 H 0.140 0.860 42 H 0.139 0.861 43 H 0.133 0.867 44 H 0.114 0.886 45 H 0.126 0.874 46 H 0.132 0.868 47 H 0.108 0.892 48 H 0.259 0.741 49 H 0.164 0.836 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -3.527 0.147 0.182 3.534 hybrid contribution -0.695 -0.896 0.230 1.157 sum -4.222 -0.749 0.411 4.308 Atomic orbital electron populations 1.86573 1.16058 1.81744 1.49114 1.24396 0.85247 1.11214 0.92995 0.94406 0.81452 0.76909 0.87358 1.22912 0.99040 0.94647 0.93445 1.21571 1.03600 0.95867 0.97874 1.21866 1.01660 0.98854 0.98228 1.20257 1.02436 0.88196 0.90729 1.17566 0.99120 0.94590 0.92004 1.21293 0.93958 0.96750 0.95374 1.20245 1.03643 0.94649 0.98339 1.17960 0.80942 0.83102 0.83065 1.90872 1.38002 1.82485 1.25731 1.45603 1.48379 1.12730 1.30059 1.19603 0.91875 0.83402 0.94068 1.19591 0.95682 0.95024 0.97206 1.20915 0.99867 0.94360 0.97833 1.21134 0.96170 0.99842 0.96265 1.21207 0.95832 0.96794 0.99857 1.21151 1.00065 0.95091 0.97344 1.20864 0.95430 0.99218 0.96191 1.24013 0.94087 1.05876 0.95085 1.23132 0.83673 0.94429 0.95872 0.87269 1.92832 1.57599 1.77199 1.90655 1.24026 0.97229 1.01499 0.96301 1.18590 0.88703 0.90979 0.88291 1.84756 1.35568 1.88729 1.19587 1.21410 0.98331 0.97746 0.99171 1.21138 0.95819 0.98205 0.91863 1.83911 1.55083 1.39324 1.28011 0.76828 0.85013 1.17007 1.17562 0.82788 0.82797 0.84692 0.76003 0.85904 0.85784 0.85983 0.86087 0.86674 0.88575 0.87424 0.86808 0.89176 0.74098 0.83615 0.84201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.69 12.87 -35.23 -0.45 0.24 16 2 C -0.03 0.04 2.98 36.00 0.11 0.15 16 3 Si 0.70 -1.47 32.10 -169.99 -5.46 -6.92 16 4 C -0.05 0.02 6.22 -35.56 -0.22 -0.20 16 5 C -0.17 0.02 10.77 -39.80 -0.43 -0.41 16 6 C -0.19 0.11 10.26 -39.37 -0.40 -0.30 16 7 C 0.03 -0.01 7.03 -36.49 -0.26 -0.26 16 8 C -0.03 0.03 5.87 -105.03 -0.62 -0.59 16 9 C -0.05 0.07 9.20 -38.78 -0.36 -0.28 16 10 C -0.17 -0.01 5.88 -104.90 -0.62 -0.63 16 11 C 0.56 0.63 6.18 -12.46 -0.08 0.55 16 12 O -0.50 -2.16 13.39 -16.66 -0.22 -2.38 16 13 N -0.71 0.84 4.10 -48.95 -0.20 0.64 16 14 C 0.20 -0.06 0.97 -132.17 -0.13 -0.19 16 15 C -0.07 -0.08 5.06 -104.63 -0.53 -0.60 16 16 C -0.11 -0.09 8.43 -39.58 -0.33 -0.43 16 17 C -0.12 -0.09 10.05 -39.58 -0.40 -0.48 16 18 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 19 C -0.12 -0.12 10.05 -39.58 -0.40 -0.51 16 20 C -0.10 -0.13 9.00 -39.58 -0.36 -0.48 16 21 C -0.15 -0.14 6.59 -25.92 -0.17 -0.31 16 22 C 0.07 0.00 5.58 -25.92 -0.14 -0.15 16 23 H 0.11 -0.12 8.14 -51.93 -0.42 -0.55 16 24 F -0.20 -0.53 17.41 2.25 0.04 -0.49 16 25 C -0.15 0.26 7.17 -25.92 -0.19 0.07 16 26 C 0.18 0.05 6.72 -38.62 -0.26 -0.21 16 27 O -0.47 -0.55 11.55 -40.60 -0.47 -1.02 16 28 C -0.15 0.22 9.96 -39.54 -0.39 -0.17 16 29 C -0.05 0.10 9.54 -39.15 -0.37 -0.27 16 30 O -0.17 0.02 8.78 4.58 0.04 0.06 16 31 H 0.38 -1.95 8.70 45.56 0.40 -1.56 16 32 H 0.13 -0.22 7.96 -51.93 -0.41 -0.63 16 33 H -0.25 -0.16 7.11 56.52 0.40 0.25 16 34 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 35 H 0.15 -0.15 8.06 -52.49 -0.42 -0.58 16 36 H 0.15 -0.40 7.24 -52.49 -0.38 -0.78 16 37 H 0.14 -0.44 6.25 -52.49 -0.33 -0.77 16 38 H 0.40 -1.47 6.80 -40.82 -0.28 -1.75 16 39 H 0.12 -0.06 6.74 -52.49 -0.35 -0.42 16 40 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 41 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 42 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 43 H 0.12 0.07 6.54 -52.48 -0.34 -0.28 16 44 H 0.10 0.27 6.67 -51.93 -0.35 -0.08 16 45 H 0.11 0.09 6.67 -51.93 -0.35 -0.25 16 46 H 0.11 -0.20 7.29 -51.93 -0.38 -0.58 16 47 H 0.09 -0.31 8.13 -51.93 -0.42 -0.73 16 48 H 0.40 -0.96 9.06 45.56 0.41 -0.55 16 49 H 0.15 -0.46 8.06 -52.49 -0.42 -0.88 16 50 H 0.14 -0.56 6.96 -52.49 -0.37 -0.92 16 LS Contribution 421.39 15.07 6.35 6.35 Total: 0.00 -9.88 421.39 -12.19 -22.07 By element: Atomic # 1 Polarization: -7.47 SS G_CDS: -4.88 Total: -12.35 kcal Atomic # 6 Polarization: 0.73 SS G_CDS: -6.94 Total: -6.20 kcal Atomic # 7 Polarization: 0.84 SS G_CDS: -0.20 Total: 0.64 kcal Atomic # 8 Polarization: -1.99 SS G_CDS: -1.11 Total: -3.10 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.04 Total: -0.49 kcal Atomic # 14 Polarization: -1.47 SS G_CDS: -5.46 Total: -6.92 kcal Total LS contribution 6.35 Total: 6.35 kcal Total: -9.88 -12.19 -22.07 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_13259648.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.725 kcal (2) G-P(sol) polarization free energy of solvation -9.882 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.607 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.072 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.797 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds