Wall clock time and date at job start Sat Mar 6 2021 20:39:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42910 * 1 3 3 Si 1.86306 * 109.46689 * 2 1 4 4 C 1.50697 * 109.47271 * 240.00232 * 2 1 3 5 5 C 1.34709 * 125.66115 * 299.99439 * 4 2 1 6 6 C 1.40974 * 107.02378 * 180.02562 * 5 4 2 7 7 C 1.35929 * 106.74429 * 0.02562 * 6 5 4 8 8 C 1.47821 * 125.93236 * 179.97438 * 7 6 5 9 9 C 1.39171 * 120.00093 * 180.02562 * 8 7 6 10 10 C 1.39465 * 119.75441 * 179.74187 * 9 8 7 11 11 C 1.47560 * 120.12194 * 180.23137 * 10 9 8 12 12 O 1.21585 * 120.00252 * 180.25458 * 11 10 9 13 13 N 1.34777 * 120.00256 * 0.26241 * 11 10 9 14 14 C 1.46497 * 120.00350 * 174.79326 * 13 11 10 15 15 C 1.50696 * 112.84708 * 76.03809 * 14 13 11 16 16 C 1.38239 * 119.99967 * 184.86349 * 15 14 13 17 17 C 1.38243 * 120.00230 * 179.76728 * 16 15 14 18 18 C 1.38230 * 119.99441 * 0.48011 * 17 16 15 19 19 C 1.38241 * 120.00625 * 359.78994 * 18 17 16 20 20 C 1.38233 * 120.00505 * 5.12899 * 15 14 13 21 21 C 1.53775 * 113.61458 * 304.83797 * 14 13 11 22 22 C 1.53775 * 87.08206 * 270.88366 * 21 14 13 23 23 H 1.09001 * 113.61674 * 89.11920 * 22 21 14 24 24 F 1.39907 * 113.61386 * 220.01853 * 22 21 14 25 25 C 1.53778 * 113.61419 * 207.33788 * 14 13 11 26 26 C 1.40208 * 119.75698 * 0.49332 * 10 9 8 27 27 O 1.35649 * 120.00395 * 179.76759 * 26 10 9 28 28 C 1.38826 * 119.99681 * 359.48653 * 26 10 9 29 29 C 1.37764 * 120.24164 * 0.27864 * 28 26 10 30 30 O 1.34341 * 125.66592 * 120.30945 * 4 2 1 31 31 H 0.96699 * 113.99476 * 60.00020 * 1 2 3 32 32 H 1.08997 * 109.47016 * 119.99488 * 2 1 3 33 33 H 1.48498 * 109.99832 * 60.00049 * 3 2 1 34 34 H 1.48501 * 109.99711 * 181.31721 * 3 2 1 35 35 H 1.07994 * 126.48949 * 0.05174 * 5 4 2 36 36 H 1.07997 * 126.62557 * 179.97438 * 6 5 4 37 37 H 1.07996 * 120.12234 * 359.97438 * 9 8 7 38 38 H 0.97008 * 119.99711 * 354.79019 * 13 11 10 39 39 H 1.08001 * 119.99950 * 359.97438 * 16 15 14 40 40 H 1.07991 * 119.99920 * 180.25132 * 17 16 15 41 41 H 1.08004 * 119.99787 * 179.77547 * 18 17 16 42 42 H 1.07997 * 119.99980 * 179.97438 * 19 18 17 43 43 H 1.08007 * 119.99962 * 0.02562 * 20 15 14 44 44 H 1.08995 * 113.61513 * 25.43619 * 21 14 13 45 45 H 1.09007 * 113.61285 * 156.33211 * 21 14 13 46 46 H 1.09002 * 113.62048 * 203.66511 * 25 14 13 47 47 H 1.08999 * 113.61730 * 334.57196 * 25 14 13 48 48 H 0.96703 * 114.00154 * 269.72352 * 27 26 10 49 49 H 1.07998 * 119.87726 * 180.25750 * 28 26 10 50 50 H 1.07998 * 119.87694 * 179.97438 * 29 28 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9315 -0.7103 -1.2305 5 6 1.6774 -1.9926 -1.5557 6 6 2.3355 -2.2470 -2.7762 7 6 2.9616 -1.0939 -3.1313 8 6 3.7793 -0.8892 -4.3456 9 6 4.3671 0.3487 -4.5882 10 6 5.1419 0.5346 -5.7328 11 6 5.7731 1.8423 -5.9955 12 8 6.4444 2.0033 -6.9964 13 7 5.6057 2.8582 -5.1258 14 6 6.3232 4.1196 -5.3261 15 6 5.7277 4.9638 -6.4232 16 6 6.3477 6.1388 -6.8051 17 6 5.8040 6.9108 -7.8148 18 6 4.6350 6.5128 -8.4357 19 6 4.0118 5.3406 -8.0501 20 6 4.5583 4.5661 -7.0439 21 6 7.8475 3.9503 -5.4376 22 6 7.8974 4.1030 -3.9083 23 1 7.7940 3.1599 -3.3716 24 9 8.9762 4.8710 -3.4567 25 6 6.5835 4.8938 -4.0231 26 6 5.3145 -0.5240 -6.6358 27 8 6.0632 -0.3474 -7.7531 28 6 4.7238 -1.7548 -6.3836 29 6 3.9624 -1.9397 -5.2504 30 8 2.7119 -0.1717 -2.1821 31 1 -0.3932 0.4417 -0.7651 32 1 1.7924 -0.5137 0.8900 33 1 1.5614 2.4679 1.2085 34 1 3.5346 1.7704 -0.0321 35 1 1.0819 -2.6931 -0.9891 36 1 2.3418 -3.1784 -3.3229 37 1 4.2268 1.1613 -3.8909 38 1 5.0100 2.7542 -4.3673 39 1 7.2588 6.4520 -6.3169 40 1 6.2907 7.8266 -8.1159 41 1 4.2082 7.1177 -9.2221 42 1 3.0982 5.0299 -8.5350 43 1 4.0713 3.6504 -6.7424 44 1 8.1528 2.9644 -5.7882 45 1 8.3390 4.7622 -5.9738 46 1 6.7294 5.9636 -4.1724 47 1 5.8684 4.6696 -3.2316 48 1 5.5597 -0.0409 -8.5197 49 1 4.8614 -2.5701 -7.0783 50 1 3.5053 -2.8995 -5.0602 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_13259648.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:39:38 Heat of formation + Delta-G solvation = -37.386716 kcal Electronic energy + Delta-G solvation = -39185.801434 eV Core-core repulsion = 34027.586451 eV Total energy + Delta-G solvation = -5158.214983 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.141 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -48.66683 -43.69285 -42.16653 -40.88956 -39.41913 -38.41264 -38.07037 -37.76435 -34.68104 -34.10588 -32.73656 -32.39081 -31.82863 -31.57580 -30.02343 -27.18406 -26.40597 -26.34116 -25.06700 -23.72676 -23.44375 -22.97498 -22.49755 -21.90714 -21.20833 -20.41083 -19.64641 -19.14362 -18.62724 -18.31057 -17.60942 -17.44098 -17.35365 -17.14185 -16.71085 -16.61759 -16.37504 -16.33584 -15.93806 -15.82937 -15.70790 -15.64343 -15.44928 -15.13285 -14.62426 -14.45613 -14.33024 -14.28507 -14.03889 -13.96610 -13.92888 -13.85292 -13.57833 -13.55723 -13.33415 -13.18986 -13.10526 -12.76092 -12.57738 -12.31916 -12.20254 -11.97300 -11.86403 -11.75484 -11.47476 -11.05515 -10.86446 -10.68045 -10.44014 -10.34745 -10.18233 -9.84310 -9.62407 -8.89659 -5.02372 -0.55655 -0.20741 0.36998 0.47600 0.77623 1.17684 1.44277 1.50058 1.77690 1.82032 1.87617 1.92718 2.62392 2.72515 3.10824 3.12691 3.19888 3.24539 3.36980 3.39899 3.44228 3.58012 3.69308 3.75246 3.89986 3.97971 4.02307 4.05823 4.08508 4.16483 4.21512 4.25972 4.32277 4.40615 4.48836 4.54992 4.59185 4.62711 4.64774 4.67764 4.71182 4.79432 4.81355 4.88720 4.98369 5.02538 5.03642 5.12965 5.14541 5.21108 5.32466 5.44449 5.50663 5.53942 5.60735 5.67988 5.99485 6.06871 6.36075 6.63416 6.72195 7.10439 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.031 4.031 3 Si 0.778 3.222 4 C -0.054 4.054 5 C -0.184 4.184 6 C -0.191 4.191 7 C 0.024 3.976 8 C -0.040 4.040 9 C -0.050 4.050 10 C -0.177 4.177 11 C 0.563 3.437 12 O -0.536 6.536 13 N -0.701 5.701 14 C 0.200 3.800 15 C -0.082 4.082 16 C -0.122 4.122 17 C -0.126 4.126 18 C -0.130 4.130 19 C -0.130 4.130 20 C -0.111 4.111 21 C -0.157 4.157 22 C 0.063 3.937 23 H 0.121 0.879 24 F -0.218 7.218 25 C -0.140 4.140 26 C 0.166 3.834 27 O -0.494 6.494 28 C -0.148 4.148 29 C -0.045 4.045 30 O -0.170 6.170 31 H 0.399 0.601 32 H 0.132 0.868 33 H -0.284 1.284 34 H -0.285 1.285 35 H 0.159 0.841 36 H 0.173 0.827 37 H 0.152 0.848 38 H 0.416 0.584 39 H 0.132 0.868 40 H 0.138 0.862 41 H 0.137 0.863 42 H 0.133 0.867 43 H 0.118 0.882 44 H 0.073 0.927 45 H 0.103 0.897 46 H 0.117 0.883 47 H 0.115 0.885 48 H 0.410 0.590 49 H 0.161 0.839 50 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.383 -0.747 0.088 6.427 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.141 4.141 3 Si 0.682 3.318 4 C -0.104 4.104 5 C -0.203 4.203 6 C -0.210 4.210 7 C -0.025 4.025 8 C -0.041 4.041 9 C -0.069 4.069 10 C -0.181 4.181 11 C 0.351 3.649 12 O -0.413 6.413 13 N -0.355 5.355 14 C 0.113 3.887 15 C -0.083 4.083 16 C -0.140 4.140 17 C -0.144 4.144 18 C -0.147 4.147 19 C -0.147 4.147 20 C -0.129 4.129 21 C -0.196 4.196 22 C 0.027 3.973 23 H 0.139 0.861 24 F -0.199 7.199 25 C -0.178 4.178 26 C 0.119 3.881 27 O -0.308 6.308 28 C -0.166 4.166 29 C -0.063 4.063 30 O -0.068 6.068 31 H 0.250 0.750 32 H 0.149 0.851 33 H -0.211 1.211 34 H -0.211 1.211 35 H 0.177 0.823 36 H 0.190 0.810 37 H 0.169 0.831 38 H 0.256 0.744 39 H 0.150 0.850 40 H 0.156 0.844 41 H 0.155 0.845 42 H 0.151 0.849 43 H 0.136 0.864 44 H 0.092 0.908 45 H 0.121 0.879 46 H 0.135 0.865 47 H 0.133 0.867 48 H 0.271 0.729 49 H 0.179 0.821 50 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -4.740 -0.216 0.708 4.797 hybrid contribution -0.336 -0.813 0.067 0.882 sum -5.076 -1.028 0.774 5.237 Atomic orbital electron populations 1.86539 1.16009 1.82166 1.50306 1.24498 0.85370 1.11564 0.92641 0.93445 0.78226 0.74928 0.85208 1.23100 0.98916 0.94824 0.93582 1.21776 1.04018 0.96180 0.98349 1.22142 1.01171 0.99497 0.98146 1.20417 1.02781 0.88397 0.90914 1.17676 0.99300 0.94988 0.92105 1.21427 0.93139 0.97328 0.94991 1.20206 1.04560 0.94186 0.99125 1.18160 0.80334 0.83719 0.82679 1.90850 1.39848 1.83157 1.27420 1.45483 1.48053 1.12011 1.29967 1.19560 0.90912 0.83649 0.94614 1.19758 0.95723 0.95266 0.97584 1.21115 1.00279 0.94499 0.98124 1.21404 0.96327 1.00438 0.96206 1.21465 0.95984 0.97008 1.00289 1.21394 1.00671 0.95261 0.97421 1.21000 0.95816 0.99487 0.96606 1.23993 0.95229 1.04415 0.95934 1.23295 0.83870 0.95103 0.95019 0.86128 1.92798 1.58619 1.77696 1.90755 1.23986 0.96494 1.01247 0.96023 1.18868 0.89165 0.91849 0.88202 1.84715 1.36724 1.88930 1.20411 1.21564 0.97996 0.97427 0.99649 1.21406 0.94983 0.98874 0.91056 1.83891 1.55198 1.39553 1.28149 0.74988 0.85058 1.21067 1.21094 0.82328 0.80983 0.83053 0.74445 0.85020 0.84369 0.84542 0.84866 0.86424 0.90811 0.87852 0.86510 0.86699 0.72941 0.82101 0.81952 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.80 12.87 -148.98 -1.92 -0.12 16 2 C -0.03 0.10 2.98 71.24 0.21 0.32 16 3 Si 0.78 -3.43 32.10 68.60 2.20 -1.23 16 4 C -0.05 0.07 6.22 24.87 0.15 0.23 16 5 C -0.18 0.18 10.77 22.13 0.24 0.42 16 6 C -0.19 0.44 10.26 22.40 0.23 0.67 16 7 C 0.02 -0.03 7.03 24.27 0.17 0.14 16 8 C -0.04 0.11 5.87 -20.13 -0.12 -0.01 16 9 C -0.05 0.15 9.20 22.79 0.21 0.36 16 10 C -0.18 -0.11 5.88 -20.04 -0.12 -0.23 16 11 C 0.56 1.84 6.18 86.70 0.54 2.37 16 12 O -0.54 -5.69 13.39 17.01 0.23 -5.46 16 13 N -0.70 1.46 4.10 -427.05 -1.75 -0.29 16 14 C 0.20 -0.04 0.97 3.38 0.00 -0.03 16 15 C -0.08 -0.22 5.06 -19.87 -0.10 -0.32 16 16 C -0.12 -0.28 8.43 22.27 0.19 -0.09 16 17 C -0.13 -0.23 10.05 22.27 0.22 -0.01 16 18 C -0.13 -0.24 10.05 22.27 0.22 -0.02 16 19 C -0.13 -0.32 10.05 22.27 0.22 -0.09 16 20 C -0.11 -0.36 9.00 22.27 0.20 -0.16 16 21 C -0.16 -0.49 6.59 31.12 0.21 -0.29 16 22 C 0.06 0.01 5.58 31.12 0.17 0.18 16 23 H 0.12 -0.28 8.14 -2.39 -0.02 -0.30 16 24 F -0.22 -1.26 17.41 44.97 0.78 -0.47 16 25 C -0.14 0.54 7.17 31.12 0.22 0.76 16 26 C 0.17 0.19 6.72 22.89 0.15 0.35 16 27 O -0.49 -1.85 11.55 -68.65 -0.79 -2.64 16 28 C -0.15 0.51 9.96 22.30 0.22 0.73 16 29 C -0.05 0.23 9.54 22.55 0.22 0.44 16 30 O -0.17 0.17 8.78 -6.53 -0.06 0.12 16 31 H 0.40 -4.45 8.70 -74.06 -0.64 -5.09 16 32 H 0.13 -0.47 7.96 -2.39 -0.02 -0.48 16 33 H -0.28 -0.52 7.11 99.48 0.71 0.19 16 34 H -0.28 -0.31 7.11 99.48 0.71 0.40 16 35 H 0.16 -0.40 8.06 -2.91 -0.02 -0.43 16 36 H 0.17 -1.20 7.24 -2.91 -0.02 -1.23 16 37 H 0.15 -1.12 6.25 -2.91 -0.02 -1.14 16 38 H 0.42 -3.27 6.80 -92.70 -0.63 -3.90 16 39 H 0.13 -0.05 6.74 -2.91 -0.02 -0.07 16 40 H 0.14 -0.27 8.06 -2.92 -0.02 -0.29 16 41 H 0.14 -0.26 8.06 -2.91 -0.02 -0.29 16 42 H 0.13 -0.14 8.06 -2.91 -0.02 -0.16 16 43 H 0.12 0.22 6.54 -2.91 -0.02 0.20 16 44 H 0.07 0.58 6.67 -2.39 -0.02 0.56 16 45 H 0.10 0.36 6.67 -2.38 -0.02 0.34 16 46 H 0.12 -0.47 7.29 -2.39 -0.02 -0.49 16 47 H 0.11 -1.00 8.13 -2.39 -0.02 -1.02 16 48 H 0.41 -1.24 9.06 -74.06 -0.67 -1.91 16 49 H 0.16 -1.13 8.06 -2.91 -0.02 -1.15 16 50 H 0.16 -1.63 6.96 -2.91 -0.02 -1.65 16 Total: 0.00 -23.78 421.39 1.51 -22.27 By element: Atomic # 1 Polarization: -17.05 SS G_CDS: -0.85 Total: -17.90 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: 3.67 Total: 5.74 kcal Atomic # 7 Polarization: 1.46 SS G_CDS: -1.75 Total: -0.29 kcal Atomic # 8 Polarization: -5.57 SS G_CDS: -2.54 Total: -8.10 kcal Atomic # 9 Polarization: -1.26 SS G_CDS: 0.78 Total: -0.47 kcal Atomic # 14 Polarization: -3.43 SS G_CDS: 2.20 Total: -1.23 kcal Total: -23.78 1.51 -22.27 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_13259648.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.119 kcal (2) G-P(sol) polarization free energy of solvation -23.777 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.896 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.509 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.267 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.387 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds