Wall clock time and date at job start Sat Mar 6 2021 20:39:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42910 * 1 3 3 Si 1.86307 * 109.46841 * 2 1 4 4 C 1.50699 * 109.46935 * 240.00495 * 2 1 3 5 5 C 1.34189 * 126.54505 * 104.94503 * 4 2 1 6 6 N 1.36869 * 109.96844 * 180.02562 * 5 4 2 7 7 C 1.37400 * 109.97891 * 359.97438 * 6 5 4 8 8 C 1.39331 * 133.25135 * 180.02562 * 7 6 5 9 9 C 1.36350 * 120.23497 * 179.71127 * 8 7 6 10 10 C 1.40170 * 120.67215 * 0.52721 * 9 8 7 11 11 C 1.47658 * 119.97644 * 179.74847 * 10 9 8 12 12 O 1.21572 * 120.00053 * 179.72378 * 11 10 9 13 13 N 1.34776 * 119.99614 * 359.72990 * 11 10 9 14 14 C 1.46502 * 119.99349 * 184.98425 * 13 11 10 15 15 C 1.50700 * 112.91112 * 305.37614 * 14 13 11 16 16 C 1.38229 * 120.00260 * 154.42399 * 15 14 13 17 17 C 1.38239 * 120.00045 * 179.74525 * 16 15 14 18 18 C 1.38232 * 119.99552 * 0.55466 * 17 16 15 19 19 C 1.38231 * 120.00679 * 359.70002 * 18 17 16 20 20 C 1.38235 * 119.99622 * 334.70427 * 15 14 13 21 21 C 1.53781 * 113.61217 * 174.12955 * 14 13 11 22 22 C 1.53783 * 87.17387 * 270.92446 * 21 14 13 23 23 H 1.09004 * 113.61358 * 89.07300 * 22 21 14 24 24 F 1.39902 * 113.61499 * 219.97491 * 22 21 14 25 25 C 1.53781 * 87.07826 * 334.52349 * 22 21 14 26 26 C 1.39189 * 120.05196 * 359.47850 * 10 9 8 27 27 C 1.39228 * 119.39147 * 0.25133 * 26 10 9 28 28 H 0.96698 * 114.00191 * 60.00104 * 1 2 3 29 29 H 1.08999 * 109.47029 * 120.00132 * 2 1 3 30 30 H 1.48494 * 109.99818 * 60.00239 * 3 2 1 31 31 H 1.48502 * 109.99581 * 181.32289 * 3 2 1 32 32 H 1.08001 * 125.01401 * 0.04335 * 5 4 2 33 33 H 0.96991 * 125.00781 * 179.97438 * 6 5 4 34 34 H 1.07994 * 119.88010 * 359.97438 * 8 7 6 35 35 H 1.08000 * 119.66514 * 180.25923 * 9 8 7 36 36 H 0.96993 * 120.00420 * 4.97989 * 13 11 10 37 37 H 1.08004 * 119.99899 * 0.02562 * 16 15 14 38 38 H 1.08004 * 120.00000 * 180.27735 * 17 16 15 39 39 H 1.08006 * 119.99619 * 179.72377 * 18 17 16 40 40 H 1.07997 * 120.00359 * 179.97438 * 19 18 17 41 41 H 1.07997 * 120.00462 * 359.97438 * 20 15 14 42 42 H 1.09006 * 113.61713 * 156.33389 * 21 14 13 43 43 H 1.09007 * 113.61710 * 25.51417 * 21 14 13 44 44 H 1.09005 * 113.61229 * 139.97788 * 25 22 21 45 45 H 1.08996 * 113.61768 * 270.88577 * 25 22 21 46 46 H 1.07997 * 120.30805 * 180.27515 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.4598 -0.1385 -2.3234 6 7 2.8016 -1.1003 -3.2353 7 6 2.4954 -2.3454 -2.7414 8 6 2.6350 -3.6350 -3.2501 9 6 2.2378 -4.7107 -2.5124 10 6 1.6750 -4.5370 -1.2404 11 6 1.2450 -5.7125 -0.4571 12 8 0.7614 -5.5626 0.6482 13 7 1.3888 -6.9516 -0.9674 14 6 0.8637 -8.1092 -0.2391 15 6 1.3765 -8.1942 1.1755 16 6 0.6358 -8.8500 2.1409 17 6 1.1087 -8.9326 3.4373 18 6 2.3169 -8.3493 3.7706 19 6 3.0551 -7.6889 2.8064 20 6 2.5848 -7.6113 1.5088 21 6 0.9798 -9.4307 -1.0168 22 6 -0.4013 -9.1126 -1.6136 23 1 -0.3559 -8.5251 -2.5307 24 9 -1.2352 -10.2305 -1.7238 25 6 -0.6640 -8.2698 -0.3544 26 6 1.5262 -3.2576 -0.7129 27 6 1.9360 -2.1577 -1.4618 28 1 -0.3933 0.4417 -0.7650 29 1 1.7924 -0.5138 0.8900 30 1 1.5615 2.4679 1.2085 31 1 3.5346 1.7703 -0.0322 32 1 2.5957 0.9238 -2.4628 33 1 3.2010 -0.9283 -4.1022 34 1 3.0631 -3.7833 -4.2303 35 1 2.3540 -5.7065 -2.9139 36 1 1.8399 -7.0769 -1.8169 37 1 -0.3102 -9.3019 1.8814 38 1 0.5322 -9.4488 4.1906 39 1 2.6842 -8.4100 4.7845 40 1 3.9987 -7.2329 3.0670 41 1 3.1616 -7.0954 0.7554 42 1 0.9865 -10.3141 -0.3782 43 1 1.7833 -9.4349 -1.7534 44 1 -1.1874 -7.3351 -0.5560 45 1 -1.1067 -8.8356 0.4653 46 1 1.0971 -3.1192 0.2685 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:39:43 Heat of formation + Delta-G solvation = 13.772748 kcal Electronic energy + Delta-G solvation = -32736.287118 eV Core-core repulsion = 28280.455189 eV Total energy + Delta-G solvation = -4455.831929 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.137 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -48.53457 -42.55068 -41.81573 -39.77588 -38.60268 -37.86372 -37.35551 -34.28080 -33.29709 -31.88811 -31.63770 -30.79105 -30.40898 -27.19632 -26.51417 -26.14315 -24.63170 -23.53171 -23.36003 -22.48988 -21.73061 -20.82528 -20.27917 -19.37098 -18.57024 -18.37332 -17.53479 -17.36660 -17.25490 -16.78114 -16.55599 -16.23054 -16.05614 -15.82686 -15.61288 -15.57220 -15.47216 -15.16194 -14.97961 -14.79801 -14.77040 -14.26843 -14.07968 -13.91439 -13.88832 -13.69392 -13.66437 -13.49717 -13.23842 -12.69420 -12.52476 -12.30741 -12.21981 -12.16604 -11.90325 -11.79911 -11.61011 -11.43084 -10.86546 -10.82895 -10.34449 -10.17984 -9.65810 -9.44890 -9.35650 -8.87350 -5.10388 -0.09205 0.13854 0.54290 0.66051 1.28479 1.43570 1.63003 1.92768 1.95071 1.97774 1.98758 2.85949 2.91680 3.13956 3.24942 3.46612 3.50844 3.54844 3.59250 3.67302 3.72325 3.76885 3.79776 4.02773 4.08744 4.17501 4.24015 4.31551 4.32552 4.39126 4.46363 4.50289 4.53996 4.56325 4.57286 4.72614 4.75591 4.77661 4.90004 4.97412 5.03827 5.17174 5.20085 5.26091 5.32320 5.41051 5.48024 5.56008 5.68720 5.76601 5.82203 5.93374 6.21727 6.31611 6.46625 6.67315 7.29285 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.034 4.034 3 Si 0.687 3.313 4 C -0.192 4.192 5 C 0.062 3.938 6 N -0.585 5.585 7 C 0.119 3.881 8 C -0.133 4.133 9 C -0.068 4.068 10 C -0.169 4.169 11 C 0.565 3.435 12 O -0.514 6.514 13 N -0.714 5.714 14 C 0.199 3.801 15 C -0.064 4.064 16 C -0.111 4.111 17 C -0.118 4.118 18 C -0.119 4.119 19 C -0.119 4.119 20 C -0.093 4.093 21 C -0.152 4.152 22 C 0.067 3.933 23 H 0.111 0.889 24 F -0.202 7.202 25 C -0.162 4.162 26 C 0.009 3.991 27 C -0.103 4.103 28 H 0.377 0.623 29 H 0.112 0.888 30 H -0.254 1.254 31 H -0.256 1.256 32 H 0.179 0.821 33 H 0.421 0.579 34 H 0.128 0.872 35 H 0.127 0.873 36 H 0.402 0.598 37 H 0.123 0.877 38 H 0.123 0.877 39 H 0.121 0.879 40 H 0.119 0.881 41 H 0.113 0.887 42 H 0.113 0.887 43 H 0.089 0.911 44 H 0.088 0.912 45 H 0.109 0.891 46 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.226 2.984 -7.120 8.367 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.146 4.146 3 Si 0.588 3.412 4 C -0.199 4.199 5 C -0.065 4.065 6 N -0.187 5.187 7 C 0.010 3.990 8 C -0.154 4.154 9 C -0.088 4.088 10 C -0.173 4.173 11 C 0.353 3.647 12 O -0.389 6.389 13 N -0.368 5.368 14 C 0.111 3.889 15 C -0.065 4.065 16 C -0.130 4.130 17 C -0.136 4.136 18 C -0.137 4.137 19 C -0.137 4.137 20 C -0.112 4.112 21 C -0.190 4.190 22 C 0.031 3.969 23 H 0.129 0.871 24 F -0.183 7.183 25 C -0.200 4.200 26 C -0.011 4.011 27 C -0.107 4.107 28 H 0.223 0.777 29 H 0.130 0.870 30 H -0.178 1.178 31 H -0.181 1.181 32 H 0.196 0.804 33 H 0.259 0.741 34 H 0.146 0.854 35 H 0.145 0.855 36 H 0.239 0.761 37 H 0.141 0.859 38 H 0.141 0.859 39 H 0.139 0.861 40 H 0.137 0.863 41 H 0.131 0.869 42 H 0.131 0.869 43 H 0.108 0.892 44 H 0.107 0.893 45 H 0.127 0.873 46 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 3.467 3.430 -5.456 7.318 hybrid contribution 0.575 -0.543 -0.772 1.105 sum 4.042 2.887 -6.228 7.966 Atomic orbital electron populations 1.86543 1.17249 1.81718 1.48910 1.24411 0.84918 1.09016 0.96227 0.95342 0.80641 0.77166 0.88026 1.20767 1.09228 0.91972 0.97934 1.21690 1.01015 0.94307 0.89466 1.41739 1.54682 1.04143 1.18168 1.18436 0.99845 0.86527 0.94190 1.19665 1.05768 0.88853 1.01094 1.20575 0.96868 0.98308 0.93037 1.19518 1.08368 0.93154 0.96281 1.18161 0.78254 0.82504 0.85744 1.90853 1.43185 1.85675 1.19140 1.45609 1.61078 1.05074 1.25023 1.19640 0.93798 0.85744 0.89683 1.19366 0.95028 0.98704 0.93412 1.20958 0.99376 0.99695 0.92925 1.21104 0.96358 0.99883 0.96226 1.21167 0.95188 0.98001 0.99363 1.21106 0.99978 0.99359 0.93237 1.20800 0.95567 0.98367 0.96426 1.23997 0.97571 0.97398 1.00028 1.23101 0.89246 0.85063 0.99515 0.87122 1.92832 1.73499 1.54465 1.97502 1.24199 0.96031 1.01693 0.98122 1.20693 0.92352 0.89206 0.98831 1.18926 1.04511 0.92972 0.94308 0.77652 0.87034 1.17811 1.18074 0.80425 0.74092 0.85431 0.85482 0.76119 0.85884 0.85923 0.86128 0.86252 0.86860 0.86898 0.89216 0.89333 0.87267 0.84413 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.56 12.88 -35.23 -0.45 -1.02 16 2 C -0.03 -0.01 3.06 36.00 0.11 0.10 16 3 Si 0.69 -1.14 30.76 -169.99 -5.23 -6.37 16 4 C -0.19 -0.04 5.58 -102.69 -0.57 -0.62 16 5 C 0.06 -0.15 10.43 -16.73 -0.17 -0.32 16 6 N -0.59 1.43 6.05 -10.61 -0.06 1.37 16 7 C 0.12 0.01 7.27 -83.95 -0.61 -0.60 16 8 C -0.13 0.16 10.00 -39.86 -0.40 -0.24 16 9 C -0.07 0.07 9.46 -39.54 -0.37 -0.30 16 10 C -0.17 -0.28 5.87 -104.97 -0.62 -0.90 16 11 C 0.57 1.49 6.59 -12.41 -0.08 1.40 16 12 O -0.51 -3.34 14.60 5.30 0.08 -3.26 16 13 N -0.71 0.28 4.48 -48.78 -0.22 0.06 16 14 C 0.20 0.08 0.97 -132.01 -0.13 -0.05 16 15 C -0.06 -0.17 4.08 -104.63 -0.43 -0.59 16 16 C -0.11 -0.28 9.25 -39.58 -0.37 -0.65 16 17 C -0.12 -0.29 10.05 -39.58 -0.40 -0.69 16 18 C -0.12 -0.31 10.05 -39.59 -0.40 -0.71 16 19 C -0.12 -0.36 10.05 -39.58 -0.40 -0.75 16 20 C -0.09 -0.30 8.17 -39.58 -0.32 -0.62 16 21 C -0.15 0.21 7.21 -25.92 -0.19 0.02 16 22 C 0.07 -0.04 5.58 -25.92 -0.14 -0.18 16 23 H 0.11 -0.26 8.14 -51.93 -0.42 -0.68 16 24 F -0.20 -0.47 17.41 2.25 0.04 -0.43 16 25 C -0.16 -0.11 7.05 -25.78 -0.18 -0.30 16 26 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 27 C -0.10 -0.20 6.34 -105.15 -0.67 -0.87 16 28 H 0.38 -1.20 8.70 45.56 0.40 -0.80 16 29 H 0.11 0.16 7.96 -51.93 -0.41 -0.25 16 30 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 31 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 32 H 0.18 -1.07 6.35 -52.49 -0.33 -1.40 16 33 H 0.42 -2.31 8.96 -40.82 -0.37 -2.68 16 34 H 0.13 -0.46 8.06 -52.49 -0.42 -0.88 16 35 H 0.13 -0.53 6.37 -52.49 -0.33 -0.86 16 36 H 0.40 -1.36 6.64 -40.82 -0.27 -1.63 16 37 H 0.12 0.11 5.92 -52.48 -0.31 -0.20 16 38 H 0.12 0.07 8.06 -52.48 -0.42 -0.35 16 39 H 0.12 0.10 8.06 -52.48 -0.42 -0.33 16 40 H 0.12 0.17 8.06 -52.49 -0.42 -0.25 16 41 H 0.11 0.28 7.06 -52.49 -0.37 -0.09 16 42 H 0.11 -0.11 8.09 -51.93 -0.42 -0.53 16 43 H 0.09 -0.29 8.10 -51.93 -0.42 -0.71 16 44 H 0.09 0.15 8.14 -51.93 -0.42 -0.27 16 45 H 0.11 0.07 5.78 -51.93 -0.30 -0.23 16 46 H 0.14 0.61 7.64 -52.49 -0.40 0.21 16 LS Contribution 383.19 15.07 5.77 5.77 Total: 0.00 -10.84 383.19 -12.06 -22.91 By element: Atomic # 1 Polarization: -6.55 SS G_CDS: -5.28 Total: -11.83 kcal Atomic # 6 Polarization: -0.49 SS G_CDS: -6.71 Total: -7.20 kcal Atomic # 7 Polarization: 1.71 SS G_CDS: -0.28 Total: 1.43 kcal Atomic # 8 Polarization: -3.90 SS G_CDS: -0.38 Total: -4.28 kcal Atomic # 9 Polarization: -0.47 SS G_CDS: 0.04 Total: -0.43 kcal Atomic # 14 Polarization: -1.14 SS G_CDS: -5.23 Total: -6.37 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -10.84 -12.06 -22.91 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.680 kcal (2) G-P(sol) polarization free energy of solvation -10.843 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.837 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.064 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.907 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.773 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds