Wall clock time and date at job start Sat Mar 6 2021 20:39:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42910 * 1 3 3 Si 1.86307 * 109.46841 * 2 1 4 4 C 1.50699 * 109.46935 * 240.00495 * 2 1 3 5 5 C 1.34189 * 126.54505 * 104.94503 * 4 2 1 6 6 N 1.36869 * 109.96844 * 180.02562 * 5 4 2 7 7 C 1.37400 * 109.97891 * 359.97438 * 6 5 4 8 8 C 1.39331 * 133.25135 * 180.02562 * 7 6 5 9 9 C 1.36350 * 120.23497 * 179.71127 * 8 7 6 10 10 C 1.40170 * 120.67215 * 0.52721 * 9 8 7 11 11 C 1.47658 * 119.97644 * 179.74847 * 10 9 8 12 12 O 1.21572 * 120.00053 * 179.72378 * 11 10 9 13 13 N 1.34776 * 119.99614 * 359.72990 * 11 10 9 14 14 C 1.46502 * 119.99349 * 184.98425 * 13 11 10 15 15 C 1.50700 * 112.91112 * 305.37614 * 14 13 11 16 16 C 1.38229 * 120.00260 * 154.42399 * 15 14 13 17 17 C 1.38239 * 120.00045 * 179.74525 * 16 15 14 18 18 C 1.38232 * 119.99552 * 0.55466 * 17 16 15 19 19 C 1.38231 * 120.00679 * 359.70002 * 18 17 16 20 20 C 1.38235 * 119.99622 * 334.70427 * 15 14 13 21 21 C 1.53781 * 113.61217 * 174.12955 * 14 13 11 22 22 C 1.53783 * 87.17387 * 270.92446 * 21 14 13 23 23 H 1.09004 * 113.61358 * 89.07300 * 22 21 14 24 24 F 1.39902 * 113.61499 * 219.97491 * 22 21 14 25 25 C 1.53781 * 87.07826 * 334.52349 * 22 21 14 26 26 C 1.39189 * 120.05196 * 359.47850 * 10 9 8 27 27 C 1.39228 * 119.39147 * 0.25133 * 26 10 9 28 28 H 0.96698 * 114.00191 * 60.00104 * 1 2 3 29 29 H 1.08999 * 109.47029 * 120.00132 * 2 1 3 30 30 H 1.48494 * 109.99818 * 60.00239 * 3 2 1 31 31 H 1.48502 * 109.99581 * 181.32289 * 3 2 1 32 32 H 1.08001 * 125.01401 * 0.04335 * 5 4 2 33 33 H 0.96991 * 125.00781 * 179.97438 * 6 5 4 34 34 H 1.07994 * 119.88010 * 359.97438 * 8 7 6 35 35 H 1.08000 * 119.66514 * 180.25923 * 9 8 7 36 36 H 0.96993 * 120.00420 * 4.97989 * 13 11 10 37 37 H 1.08004 * 119.99899 * 0.02562 * 16 15 14 38 38 H 1.08004 * 120.00000 * 180.27735 * 17 16 15 39 39 H 1.08006 * 119.99619 * 179.72377 * 18 17 16 40 40 H 1.07997 * 120.00359 * 179.97438 * 19 18 17 41 41 H 1.07997 * 120.00462 * 359.97438 * 20 15 14 42 42 H 1.09006 * 113.61713 * 156.33389 * 21 14 13 43 43 H 1.09007 * 113.61710 * 25.51417 * 21 14 13 44 44 H 1.09005 * 113.61229 * 139.97788 * 25 22 21 45 45 H 1.08996 * 113.61768 * 270.88577 * 25 22 21 46 46 H 1.07997 * 120.30805 * 180.27515 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 2.4598 -0.1385 -2.3234 6 7 2.8016 -1.1003 -3.2353 7 6 2.4954 -2.3454 -2.7414 8 6 2.6350 -3.6350 -3.2501 9 6 2.2378 -4.7107 -2.5124 10 6 1.6750 -4.5370 -1.2404 11 6 1.2450 -5.7125 -0.4571 12 8 0.7614 -5.5626 0.6482 13 7 1.3888 -6.9516 -0.9674 14 6 0.8637 -8.1092 -0.2391 15 6 1.3765 -8.1942 1.1755 16 6 0.6358 -8.8500 2.1409 17 6 1.1087 -8.9326 3.4373 18 6 2.3169 -8.3493 3.7706 19 6 3.0551 -7.6889 2.8064 20 6 2.5848 -7.6113 1.5088 21 6 0.9798 -9.4307 -1.0168 22 6 -0.4013 -9.1126 -1.6136 23 1 -0.3559 -8.5251 -2.5307 24 9 -1.2352 -10.2305 -1.7238 25 6 -0.6640 -8.2698 -0.3544 26 6 1.5262 -3.2576 -0.7129 27 6 1.9360 -2.1577 -1.4618 28 1 -0.3933 0.4417 -0.7650 29 1 1.7924 -0.5138 0.8900 30 1 1.5615 2.4679 1.2085 31 1 3.5346 1.7703 -0.0322 32 1 2.5957 0.9238 -2.4628 33 1 3.2010 -0.9283 -4.1022 34 1 3.0631 -3.7833 -4.2303 35 1 2.3540 -5.7065 -2.9139 36 1 1.8399 -7.0769 -1.8169 37 1 -0.3102 -9.3019 1.8814 38 1 0.5322 -9.4488 4.1906 39 1 2.6842 -8.4100 4.7845 40 1 3.9987 -7.2329 3.0670 41 1 3.1616 -7.0954 0.7554 42 1 0.9865 -10.3141 -0.3782 43 1 1.7833 -9.4349 -1.7534 44 1 -1.1874 -7.3351 -0.5560 45 1 -1.1067 -8.8356 0.4653 46 1 1.0971 -3.1192 0.2685 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:39:42 Heat of formation + Delta-G solvation = 14.188982 kcal Electronic energy + Delta-G solvation = -32736.269068 eV Core-core repulsion = 28280.455189 eV Total energy + Delta-G solvation = -4455.813880 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.137 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -48.61934 -42.49205 -41.89728 -39.92657 -38.69378 -37.90471 -37.38019 -34.39833 -33.25669 -32.02685 -31.80919 -30.78118 -30.37766 -27.19532 -26.48663 -26.20817 -24.69111 -23.53045 -23.45885 -22.59905 -21.76739 -20.78280 -20.37576 -19.33410 -18.60010 -18.46298 -17.53310 -17.40060 -17.22283 -16.82688 -16.65159 -16.26019 -16.13645 -15.90144 -15.74714 -15.64012 -15.53826 -15.14097 -15.07417 -14.85708 -14.76721 -14.41674 -14.09544 -14.02002 -13.91416 -13.71770 -13.66208 -13.50250 -13.31358 -12.73136 -12.57521 -12.37436 -12.27902 -12.19623 -11.96369 -11.93426 -11.65313 -11.43410 -11.09730 -10.80293 -10.34050 -10.31035 -9.86268 -9.60433 -9.32760 -8.80749 -5.02440 -0.15903 0.20577 0.36393 0.45477 1.34260 1.52598 1.69826 1.83402 1.90914 2.02470 2.13218 2.72673 2.87018 3.15879 3.21914 3.41456 3.52519 3.60681 3.63660 3.68376 3.80738 3.85992 3.92352 3.98318 4.03295 4.14038 4.15416 4.18633 4.36862 4.44360 4.48069 4.54841 4.56104 4.57942 4.61003 4.65804 4.69221 4.77900 4.81046 4.99188 4.99877 5.02214 5.12224 5.26498 5.33542 5.34452 5.48421 5.50621 5.57003 5.57836 5.66369 5.98472 6.04975 6.45864 6.60476 6.86256 7.18360 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.053 4.053 3 Si 0.811 3.189 4 C -0.228 4.228 5 C 0.087 3.913 6 N -0.572 5.572 7 C 0.111 3.889 8 C -0.125 4.125 9 C -0.068 4.068 10 C -0.177 4.177 11 C 0.564 3.436 12 O -0.563 6.563 13 N -0.695 5.695 14 C 0.195 3.805 15 C -0.071 4.071 16 C -0.126 4.126 17 C -0.128 4.128 18 C -0.132 4.132 19 C -0.134 4.134 20 C -0.108 4.108 21 C -0.139 4.139 22 C 0.071 3.929 23 H 0.135 0.865 24 F -0.218 7.218 25 C -0.169 4.169 26 C -0.024 4.024 27 C -0.129 4.129 28 H 0.393 0.607 29 H 0.082 0.918 30 H -0.308 1.308 31 H -0.279 1.279 32 H 0.220 0.780 33 H 0.439 0.561 34 H 0.162 0.838 35 H 0.163 0.837 36 H 0.419 0.581 37 H 0.134 0.866 38 H 0.139 0.861 39 H 0.136 0.864 40 H 0.129 0.871 41 H 0.115 0.885 42 H 0.110 0.890 43 H 0.118 0.882 44 H 0.072 0.928 45 H 0.104 0.896 46 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.607 3.245 -10.512 11.927 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.162 4.162 3 Si 0.716 3.284 4 C -0.235 4.235 5 C -0.041 4.041 6 N -0.175 5.175 7 C 0.001 3.999 8 C -0.145 4.145 9 C -0.088 4.088 10 C -0.181 4.181 11 C 0.354 3.646 12 O -0.442 6.442 13 N -0.349 5.349 14 C 0.108 3.892 15 C -0.072 4.072 16 C -0.144 4.144 17 C -0.146 4.146 18 C -0.150 4.150 19 C -0.152 4.152 20 C -0.127 4.127 21 C -0.176 4.176 22 C 0.035 3.965 23 H 0.153 0.847 24 F -0.199 7.199 25 C -0.208 4.208 26 C -0.043 4.043 27 C -0.134 4.134 28 H 0.243 0.757 29 H 0.099 0.901 30 H -0.237 1.237 31 H -0.206 1.206 32 H 0.236 0.764 33 H 0.281 0.719 34 H 0.180 0.820 35 H 0.180 0.820 36 H 0.259 0.741 37 H 0.152 0.848 38 H 0.157 0.843 39 H 0.154 0.846 40 H 0.147 0.853 41 H 0.133 0.867 42 H 0.128 0.872 43 H 0.136 0.864 44 H 0.091 0.909 45 H 0.123 0.877 46 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 4.857 3.642 -8.936 10.803 hybrid contribution 0.112 -0.600 0.345 0.701 sum 4.969 3.042 -8.591 10.380 Atomic orbital electron populations 1.86490 1.18155 1.82418 1.50253 1.24746 0.84594 1.11263 0.95580 0.94062 0.76984 0.72417 0.84973 1.20847 1.11843 0.91611 0.99178 1.22232 0.97979 0.95891 0.87957 1.41783 1.53794 1.03166 1.18786 1.18641 0.99744 0.87985 0.93550 1.20082 1.04304 0.87987 1.02109 1.20900 0.95964 1.00305 0.91599 1.19555 1.09033 0.91994 0.97513 1.18408 0.77488 0.83542 0.85181 1.90825 1.45596 1.86418 1.21354 1.45413 1.60240 1.03942 1.25323 1.19680 0.93519 0.86859 0.89182 1.19632 0.94782 0.98149 0.94669 1.21214 0.99934 1.00051 0.93199 1.21402 0.96552 0.99894 0.96727 1.21422 0.95410 0.98084 1.00103 1.21360 1.00667 0.99684 0.93525 1.20941 0.96158 0.98849 0.96723 1.23942 0.97905 0.95794 1.00007 1.23274 0.89124 0.84360 0.99748 0.84721 1.92801 1.74154 1.55388 1.97545 1.24222 0.96116 1.01313 0.99115 1.20561 0.94648 0.90953 0.98183 1.19217 1.05132 0.93589 0.95479 0.75695 0.90065 1.23657 1.20552 0.76370 0.71921 0.82023 0.81987 0.74062 0.84836 0.84333 0.84636 0.85314 0.86702 0.87188 0.86367 0.90873 0.87749 0.88011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -2.65 12.88 -148.98 -1.92 -4.57 16 2 C -0.05 -0.15 3.06 71.24 0.22 0.07 16 3 Si 0.81 -2.56 30.76 68.60 2.11 -0.45 16 4 C -0.23 -0.33 5.58 -18.61 -0.10 -0.44 16 5 C 0.09 -0.56 10.43 82.98 0.87 0.31 16 6 N -0.57 4.04 6.05 -187.47 -1.13 2.91 16 7 C 0.11 -0.08 7.27 39.19 0.28 0.20 16 8 C -0.12 0.54 10.00 22.09 0.22 0.76 16 9 C -0.07 0.21 9.46 22.30 0.21 0.42 16 10 C -0.18 -0.90 5.87 -20.09 -0.12 -1.02 16 11 C 0.56 4.16 6.59 86.73 0.57 4.73 16 12 O -0.56 -9.50 14.60 -3.94 -0.06 -9.56 16 13 N -0.70 0.36 4.48 -426.51 -1.91 -1.55 16 14 C 0.20 0.27 0.97 3.48 0.00 0.28 16 15 C -0.07 -0.48 4.08 -19.87 -0.08 -0.56 16 16 C -0.13 -0.84 9.25 22.27 0.21 -0.64 16 17 C -0.13 -0.82 10.05 22.27 0.22 -0.59 16 18 C -0.13 -0.90 10.05 22.27 0.22 -0.68 16 19 C -0.13 -1.07 10.05 22.27 0.22 -0.84 16 20 C -0.11 -0.89 8.17 22.27 0.18 -0.71 16 21 C -0.14 0.52 7.21 31.12 0.22 0.74 16 22 C 0.07 -0.12 5.58 31.12 0.17 0.05 16 23 H 0.14 -0.88 8.14 -2.38 -0.02 -0.90 16 24 F -0.22 -0.96 17.41 44.97 0.78 -0.17 16 25 C -0.17 -0.43 7.05 31.21 0.22 -0.21 16 26 C -0.02 -0.23 9.64 22.74 0.22 -0.01 16 27 C -0.13 -0.73 6.34 -20.21 -0.13 -0.86 16 28 H 0.39 -1.96 8.70 -74.06 -0.64 -2.60 16 29 H 0.08 0.61 7.96 -2.39 -0.02 0.60 16 30 H -0.31 -1.79 7.11 99.48 0.71 -1.08 16 31 H -0.28 -0.17 7.11 99.48 0.71 0.53 16 32 H 0.22 -3.39 6.35 -2.91 -0.02 -3.41 16 33 H 0.44 -6.26 8.96 -92.72 -0.83 -7.09 16 34 H 0.16 -1.82 8.06 -2.91 -0.02 -1.84 16 35 H 0.16 -1.80 6.37 -2.91 -0.02 -1.82 16 36 H 0.42 -3.46 6.64 -92.71 -0.62 -4.08 16 37 H 0.13 0.47 5.92 -2.91 -0.02 0.45 16 38 H 0.14 0.29 8.06 -2.91 -0.02 0.27 16 39 H 0.14 0.37 8.06 -2.91 -0.02 0.34 16 40 H 0.13 0.61 8.06 -2.91 -0.02 0.58 16 41 H 0.11 0.78 7.06 -2.91 -0.02 0.76 16 42 H 0.11 -0.28 8.09 -2.38 -0.02 -0.30 16 43 H 0.12 -1.09 8.10 -2.38 -0.02 -1.11 16 44 H 0.07 0.41 8.14 -2.38 -0.02 0.39 16 45 H 0.10 0.32 5.78 -2.39 -0.01 0.31 16 46 H 0.10 1.58 7.64 -2.91 -0.02 1.55 16 Total: 0.00 -31.56 383.19 0.74 -30.83 By element: Atomic # 1 Polarization: -17.47 SS G_CDS: -0.98 Total: -18.45 kcal Atomic # 6 Polarization: -2.83 SS G_CDS: 3.84 Total: 1.01 kcal Atomic # 7 Polarization: 4.41 SS G_CDS: -3.04 Total: 1.36 kcal Atomic # 8 Polarization: -12.15 SS G_CDS: -1.98 Total: -14.13 kcal Atomic # 9 Polarization: -0.96 SS G_CDS: 0.78 Total: -0.17 kcal Atomic # 14 Polarization: -2.56 SS G_CDS: 2.11 Total: -0.45 kcal Total: -31.56 0.74 -30.83 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.016 kcal (2) G-P(sol) polarization free energy of solvation -31.563 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.453 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.736 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.827 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.189 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds