Wall clock time and date at job start Sat Mar 6 2021 20:39:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86293 * 109.47129 * 2 1 4 4 C 1.50698 * 109.47098 * 239.99824 * 2 1 3 5 5 C 1.38562 * 120.32209 * 119.97663 * 4 2 1 6 6 N 1.31527 * 120.90349 * 179.76138 * 5 4 2 7 7 C 1.32718 * 121.63987 * 0.53084 * 6 5 4 8 8 C 1.48169 * 119.72323 * 179.74756 * 7 6 5 9 9 O 1.21510 * 120.00295 * 179.72060 * 8 7 6 10 10 N 1.34776 * 119.99722 * 359.73032 * 8 7 6 11 11 C 1.46506 * 119.99841 * 185.41506 * 10 8 7 12 12 C 1.50703 * 112.84848 * 284.40043 * 11 10 8 13 13 C 1.38236 * 119.99845 * 166.69570 * 12 11 10 14 14 C 1.38234 * 120.00088 * 179.74560 * 13 12 11 15 15 C 1.38241 * 119.99518 * 0.55055 * 14 13 12 16 16 C 1.38229 * 120.00132 * 359.70601 * 15 14 13 17 17 C 1.38235 * 120.00357 * 0.02562 * 16 15 14 18 18 C 1.54055 * 113.61141 * 153.09258 * 11 10 8 19 19 C 1.53783 * 86.98420 * 270.88350 * 18 11 10 20 20 H 1.09004 * 113.61645 * 89.16124 * 19 18 11 21 21 F 1.39898 * 113.61834 * 219.98173 * 19 18 11 22 22 C 1.53779 * 113.61534 * 55.60111 * 11 10 8 23 23 C 1.39309 * 120.55673 * 359.47512 * 7 6 5 24 24 C 1.38589 * 119.05560 * 0.25090 * 23 7 6 25 25 H 0.96693 * 113.99843 * 299.99799 * 1 2 3 26 26 H 1.08996 * 109.47119 * 119.99891 * 2 1 3 27 27 H 1.48506 * 110.00359 * 300.00097 * 3 2 1 28 28 H 1.48501 * 110.00265 * 61.31775 * 3 2 1 29 29 H 1.08002 * 119.54695 * 0.02878 * 5 4 2 30 30 H 0.96999 * 120.00538 * 5.41358 * 10 8 7 31 31 H 1.08000 * 119.99966 * 0.02562 * 13 12 11 32 32 H 1.08001 * 119.99954 * 180.27497 * 14 13 12 33 33 H 1.08000 * 119.99731 * 179.72471 * 15 14 13 34 34 H 1.08004 * 119.99798 * 180.02562 * 16 15 14 35 35 H 1.07994 * 120.00493 * 179.97438 * 17 16 15 36 36 H 1.08999 * 113.61259 * 156.38090 * 18 11 10 37 37 H 1.08999 * 113.69545 * 25.39589 * 18 11 10 38 38 H 1.09005 * 113.60932 * 334.56193 * 22 11 10 39 39 H 1.08998 * 113.69233 * 203.68021 * 22 11 10 40 40 H 1.07991 * 120.47371 * 180.23204 * 23 7 6 41 41 H 1.08005 * 120.75593 * 179.97438 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7280 -0.0434 -2.1471 6 7 3.1765 -0.6536 -3.2225 7 6 2.8790 -1.9214 -3.4787 8 6 3.4028 -2.5654 -4.7060 9 8 3.1377 -3.7273 -4.9430 10 7 4.1735 -1.8624 -5.5594 11 6 4.5932 -2.4600 -6.8294 12 6 5.6935 -3.4763 -6.6626 13 6 6.0136 -4.3257 -7.7051 14 6 7.0264 -5.2544 -7.5540 15 6 7.7113 -5.3412 -6.3563 16 6 7.3876 -4.4953 -5.3121 17 6 6.3786 -3.5629 -5.4651 18 6 4.8689 -1.4253 -7.9370 19 6 3.3817 -1.5474 -8.3087 20 1 2.7381 -0.8533 -7.7682 21 9 3.1465 -1.5446 -9.6878 22 6 3.4220 -2.9563 -7.6936 23 6 2.0829 -2.6534 -2.6006 24 6 1.6007 -2.0375 -1.4565 25 1 -0.3933 0.4416 0.7650 26 1 1.7924 -0.5138 0.8900 27 1 1.5615 2.4679 -1.2085 28 1 1.5879 2.4586 1.2242 29 1 2.9877 0.9906 -1.9741 30 1 4.4503 -0.9608 -5.3328 31 1 5.4756 -4.2608 -8.6393 32 1 7.2795 -5.9150 -8.3700 33 1 8.4996 -6.0697 -6.2367 34 1 7.9231 -4.5629 -4.3765 35 1 6.1254 -2.9024 -4.6491 36 1 5.5439 -1.7859 -8.7132 37 1 5.1449 -0.4412 -7.5583 38 1 2.5308 -3.2074 -7.1184 39 1 3.7008 -3.7349 -8.4036 40 1 1.8447 -3.6860 -2.8085 41 1 0.9808 -2.5791 -0.7572 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:39:47 Heat of formation + Delta-G solvation = -8.665955 kcal Electronic energy + Delta-G solvation = -27648.622959 eV Core-core repulsion = 23603.807915 eV Total energy + Delta-G solvation = -4044.815044 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.121 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -48.51573 -42.18221 -41.33063 -39.62392 -38.48316 -38.03124 -34.68099 -33.61634 -33.03433 -31.86185 -31.65910 -28.09058 -27.17064 -25.89848 -25.04218 -23.98546 -23.38063 -22.50937 -21.94477 -20.31984 -19.36603 -18.81308 -18.56664 -18.07589 -17.31518 -17.02615 -16.77884 -16.55851 -16.28698 -16.16184 -15.79591 -15.65335 -15.62186 -15.38332 -14.97056 -14.65745 -14.36719 -14.27983 -14.08204 -14.07014 -13.88610 -13.80614 -13.58251 -13.27296 -12.64862 -12.54203 -12.25485 -12.17366 -11.90037 -11.71287 -11.50397 -11.26889 -11.13079 -10.82863 -10.63544 -10.33742 -10.17994 -9.76612 -9.55940 -5.16077 -0.59913 0.03953 0.43995 0.55523 1.02997 1.41417 1.58009 1.77731 1.80886 2.60767 2.77654 2.85833 3.08607 3.15046 3.24285 3.44206 3.48093 3.50683 3.63337 3.69733 3.77720 3.84546 4.02943 4.11296 4.14541 4.17503 4.19445 4.27489 4.50200 4.51393 4.55111 4.57685 4.65014 4.72909 4.82193 4.89460 4.94032 5.02781 5.08440 5.18553 5.31852 5.36996 5.60201 5.67621 5.73561 6.12031 6.19353 6.25337 6.56837 7.07706 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.076 4.076 3 Si 0.681 3.319 4 C -0.101 4.101 5 C 0.106 3.894 6 N -0.452 5.452 7 C 0.078 3.922 8 C 0.576 3.424 9 O -0.511 6.511 10 N -0.695 5.695 11 C 0.194 3.806 12 C -0.074 4.074 13 C -0.110 4.110 14 C -0.116 4.116 15 C -0.119 4.119 16 C -0.118 4.118 17 C -0.101 4.101 18 C -0.150 4.150 19 C 0.066 3.934 20 H 0.111 0.889 21 F -0.203 7.203 22 C -0.155 4.155 23 C -0.107 4.107 24 C -0.052 4.052 25 H 0.385 0.615 26 H 0.085 0.915 27 H -0.249 1.249 28 H -0.255 1.255 29 H 0.165 0.835 30 H 0.416 0.584 31 H 0.124 0.876 32 H 0.124 0.876 33 H 0.122 0.878 34 H 0.121 0.879 35 H 0.117 0.883 36 H 0.113 0.887 37 H 0.092 0.908 38 H 0.094 0.906 39 H 0.109 0.891 40 H 0.153 0.847 41 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.499 2.691 4.565 5.859 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.186 4.186 3 Si 0.581 3.419 4 C -0.103 4.103 5 C -0.053 4.053 6 N -0.163 5.163 7 C -0.060 4.060 8 C 0.361 3.639 9 O -0.384 6.384 10 N -0.348 5.348 11 C 0.107 3.893 12 C -0.075 4.075 13 C -0.129 4.129 14 C -0.134 4.134 15 C -0.137 4.137 16 C -0.136 4.136 17 C -0.119 4.119 18 C -0.188 4.188 19 C 0.030 3.970 20 H 0.128 0.872 21 F -0.183 7.183 22 C -0.193 4.193 23 C -0.127 4.127 24 C -0.078 4.078 25 H 0.233 0.767 26 H 0.103 0.897 27 H -0.174 1.174 28 H -0.180 1.180 29 H 0.182 0.818 30 H 0.254 0.746 31 H 0.142 0.858 32 H 0.142 0.858 33 H 0.140 0.860 34 H 0.140 0.860 35 H 0.135 0.865 36 H 0.131 0.869 37 H 0.110 0.890 38 H 0.112 0.888 39 H 0.127 0.873 40 H 0.171 0.829 41 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 2.693 2.814 3.165 5.019 hybrid contribution -1.569 -0.173 1.400 2.110 sum 1.125 2.641 4.565 5.393 Atomic orbital electron populations 1.86575 1.17243 1.80314 1.50120 1.24733 0.84945 1.11335 0.97600 0.95128 0.91419 0.74142 0.81170 1.20547 0.98170 0.95086 0.96526 1.22547 0.94317 0.99573 0.88879 1.67531 1.20580 1.09017 1.19153 1.21115 0.98224 0.90800 0.95898 1.17830 0.78410 0.85563 0.82073 1.90846 1.57860 1.15365 1.74343 1.45475 1.51979 1.19323 1.18036 1.19722 0.93464 0.93123 0.82997 1.19589 0.96377 0.96871 0.94702 1.20937 0.97843 0.95563 0.98536 1.21138 0.96024 0.98499 0.97787 1.21207 0.99875 0.99133 0.93473 1.21151 0.97610 0.95836 0.99024 1.20894 0.95687 0.98583 0.96764 1.24038 0.97066 1.00022 0.97668 1.23130 0.97380 0.99372 0.77158 0.87166 1.92828 1.95679 1.97519 1.32292 1.24042 0.99601 0.96971 0.98708 1.22202 0.95241 1.02087 0.93190 1.21533 0.96072 0.93753 0.96416 0.76651 0.89728 1.17366 1.17971 0.81825 0.74621 0.85824 0.85775 0.85975 0.86050 0.86524 0.86858 0.88977 0.88764 0.87275 0.82935 0.83549 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.44 12.75 -35.23 -0.45 -0.01 16 2 C -0.08 0.17 2.82 36.00 0.10 0.27 16 3 Si 0.68 -1.98 29.82 -169.99 -5.07 -7.05 16 4 C -0.10 0.06 5.44 -104.36 -0.57 -0.51 16 5 C 0.11 -0.06 9.84 -17.56 -0.17 -0.24 16 6 N -0.45 -0.26 9.55 -9.80 -0.09 -0.36 16 7 C 0.08 0.11 6.75 -83.01 -0.56 -0.45 16 8 C 0.58 1.27 6.69 -12.18 -0.08 1.19 16 9 O -0.51 -2.55 14.72 5.36 0.08 -2.47 16 10 N -0.70 -0.07 4.03 -48.62 -0.20 -0.27 16 11 C 0.19 0.08 0.95 -132.01 -0.13 -0.05 16 12 C -0.07 -0.13 4.99 -104.62 -0.52 -0.65 16 13 C -0.11 -0.16 8.73 -39.58 -0.35 -0.50 16 14 C -0.12 -0.15 10.05 -39.58 -0.40 -0.54 16 15 C -0.12 -0.16 10.05 -39.58 -0.40 -0.56 16 16 C -0.12 -0.20 10.05 -39.59 -0.40 -0.60 16 17 C -0.10 -0.21 9.15 -39.58 -0.36 -0.57 16 18 C -0.15 0.16 7.23 -25.77 -0.19 -0.02 16 19 C 0.07 0.01 5.57 -25.92 -0.14 -0.13 16 20 H 0.11 -0.09 8.14 -51.93 -0.42 -0.51 16 21 F -0.20 -0.56 17.41 2.25 0.04 -0.52 16 22 C -0.16 -0.17 6.58 -25.92 -0.17 -0.34 16 23 C -0.11 -0.09 9.63 -39.05 -0.38 -0.46 16 24 C -0.05 0.01 9.76 -39.31 -0.38 -0.37 16 25 H 0.38 -1.80 8.74 45.56 0.40 -1.41 16 26 H 0.08 -0.34 7.96 -51.93 -0.41 -0.76 16 27 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 28 H -0.26 0.19 7.11 56.52 0.40 0.59 16 29 H 0.17 -0.48 4.89 -52.49 -0.26 -0.74 16 30 H 0.42 -0.63 8.10 -40.82 -0.33 -0.96 16 31 H 0.12 -0.01 6.54 -52.49 -0.34 -0.35 16 32 H 0.12 -0.07 8.06 -52.49 -0.42 -0.49 16 33 H 0.12 -0.05 8.06 -52.49 -0.42 -0.48 16 34 H 0.12 0.00 8.06 -52.48 -0.42 -0.42 16 35 H 0.12 0.18 6.95 -52.49 -0.36 -0.19 16 36 H 0.11 -0.13 7.80 -51.93 -0.41 -0.54 16 37 H 0.09 -0.24 8.13 -51.93 -0.42 -0.66 16 38 H 0.09 0.24 6.71 -51.93 -0.35 -0.11 16 39 H 0.11 0.09 6.22 -51.93 -0.32 -0.24 16 40 H 0.15 0.07 7.64 -52.49 -0.40 -0.34 16 41 H 0.15 -0.25 8.06 -52.48 -0.42 -0.67 16 LS Contribution 346.82 15.07 5.23 5.23 Total: 0.00 -7.81 346.82 -10.07 -17.89 By element: Atomic # 1 Polarization: -3.39 SS G_CDS: -4.52 Total: -7.92 kcal Atomic # 6 Polarization: 0.56 SS G_CDS: -5.09 Total: -4.53 kcal Atomic # 7 Polarization: -0.34 SS G_CDS: -0.29 Total: -0.62 kcal Atomic # 8 Polarization: -2.10 SS G_CDS: -0.37 Total: -2.47 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.04 Total: -0.52 kcal Atomic # 14 Polarization: -1.98 SS G_CDS: -5.07 Total: -7.05 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -7.81 -10.07 -17.89 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.220 kcal (2) G-P(sol) polarization free energy of solvation -7.812 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.407 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.073 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.886 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.666 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds