Wall clock time and date at job start Sat Mar 6 2021 20:40:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.37789 * 119.85132 * 2 1 4 4 C 1.39707 * 119.90830 * 180.02562 * 3 2 1 5 5 C 1.47533 * 120.19209 * 180.02562 * 4 3 2 6 6 O 1.21596 * 120.00028 * 179.97438 * 5 4 3 7 7 N 1.34773 * 119.99874 * 359.97429 * 5 4 3 8 8 C 1.46508 * 120.00071 * 175.24780 * 7 5 4 9 9 C 1.50690 * 112.84997 * 72.62612 * 8 7 5 10 10 C 1.38237 * 120.00258 * 192.92377 * 9 8 7 11 11 C 1.38235 * 120.00415 * 179.79002 * 10 9 8 12 12 C 1.38234 * 119.99684 * 0.44344 * 11 10 9 13 13 C 1.38238 * 120.00250 * 359.81434 * 12 11 10 14 14 C 1.38230 * 119.99822 * 359.97434 * 13 12 11 15 15 C 1.53783 * 113.61075 * 301.43223 * 8 7 5 16 16 C 1.53780 * 87.08087 * 270.88536 * 15 8 7 17 17 H 1.08997 * 113.61877 * 89.20041 * 16 15 8 18 18 F 1.39905 * 113.61202 * 220.02174 * 16 15 8 19 19 C 1.53779 * 87.08149 * 334.56578 * 16 15 8 20 20 C 1.40140 * 119.61844 * 0.02562 * 4 3 2 21 21 O 1.35650 * 120.15137 * 179.97438 * 20 4 3 22 22 C 1.38707 * 119.69789 * 0.25441 * 20 4 3 23 23 C 1.50706 * 119.95662 * 179.72077 * 22 20 4 24 24 O 1.42891 * 109.47046 * 285.00243 * 23 22 20 25 25 Si 1.86301 * 109.47050 * 164.99889 * 23 22 20 26 26 C 1.38060 * 120.08397 * 359.46847 * 22 20 4 27 27 H 1.08995 * 109.47591 * 89.99503 * 1 2 3 28 28 H 1.09002 * 109.47154 * 209.99794 * 1 2 3 29 29 H 1.09002 * 109.47075 * 329.99580 * 1 2 3 30 30 H 1.07991 * 120.04726 * 0.02909 * 3 2 1 31 31 H 0.97001 * 120.00502 * 355.24838 * 7 5 4 32 32 H 1.08000 * 119.99584 * 0.02562 * 10 9 8 33 33 H 1.07996 * 119.99909 * 180.28212 * 11 10 9 34 34 H 1.07997 * 119.99979 * 179.83337 * 12 11 10 35 35 H 1.07993 * 120.00070 * 179.97438 * 13 12 11 36 36 H 1.07999 * 120.00294 * 179.97438 * 14 13 12 37 37 H 1.08997 * 113.61631 * 25.43427 * 15 8 7 38 38 H 1.08998 * 113.61296 * 156.33765 * 15 8 7 39 39 H 1.08998 * 113.62009 * 270.88299 * 19 16 15 40 40 H 1.09007 * 113.61227 * 139.97642 * 19 16 15 41 41 H 0.96698 * 113.99910 * 90.00150 * 21 20 4 42 42 H 1.08996 * 109.46607 * 45.00162 * 23 22 20 43 43 H 0.96700 * 113.99988 * 180.02562 * 24 23 22 44 44 H 1.48509 * 109.99751 * 59.99961 * 25 23 22 45 45 H 1.48499 * 110.00134 * 181.32129 * 25 23 22 46 46 H 1.08005 * 119.80374 * 180.25361 * 26 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5898 1.1965 -0.0005 5 6 4.3305 2.4724 0.0000 6 8 5.5465 2.4695 0.0000 7 7 3.6594 3.6411 0.0005 8 6 4.3911 4.9060 0.1062 9 6 5.1365 5.2579 -1.1552 10 6 6.0825 6.2658 -1.1407 11 6 6.7695 6.5858 -2.2968 12 6 6.5039 5.9040 -3.4696 13 6 5.5542 4.8996 -3.4855 14 6 4.8704 4.5768 -2.3284 15 6 5.2467 5.0181 1.3791 16 6 4.0072 5.6163 2.0650 17 1 3.3586 4.8697 2.5231 18 9 4.3011 6.6810 2.9238 19 6 3.5458 6.0616 0.6673 20 6 4.2837 -0.0211 -0.0016 21 8 5.6401 -0.0324 -0.0027 22 6 3.5770 -1.2147 -0.0075 23 6 4.3172 -2.5274 -0.0151 24 8 4.8540 -2.7641 -1.3180 25 14 3.1447 -3.9041 0.4331 26 6 2.1965 -1.2017 -0.0012 27 1 -0.3634 0.0001 -1.0276 28 1 -0.3633 -0.8900 0.5138 29 1 -0.3633 0.8900 0.5139 30 1 1.6512 2.1293 0.0005 31 1 2.6919 3.6449 -0.0690 32 1 6.2875 6.8008 -0.2252 33 1 7.5117 7.3701 -2.2843 34 1 7.0387 6.1557 -4.3735 35 1 5.3465 4.3673 -4.4018 36 1 4.1281 3.7924 -2.3407 37 1 5.5495 4.0542 1.7880 38 1 6.0761 5.7194 1.2873 39 1 3.9101 7.0482 0.3809 40 1 2.4753 5.9400 0.5016 41 1 6.0341 -0.0361 0.8804 42 1 5.1291 -2.4908 0.7112 43 1 5.3443 -3.5938 -1.3967 44 1 2.0330 -3.9644 -0.5497 45 1 3.8695 -5.1999 0.4603 46 1 1.6509 -2.1338 -0.0016 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:40:13 Heat of formation + Delta-G solvation = -62.696446 kcal Electronic energy + Delta-G solvation = -32626.431289 eV Core-core repulsion = 28170.479407 eV Total energy + Delta-G solvation = -4455.951882 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -48.55907 -42.14286 -41.15114 -39.46804 -38.43816 -38.02218 -37.62047 -34.54470 -33.23661 -32.68725 -31.79422 -31.57995 -27.69886 -27.21551 -26.84514 -26.31960 -24.81487 -23.44925 -22.50021 -21.90346 -21.60219 -20.35329 -19.49034 -18.57115 -18.54654 -18.35039 -17.61110 -17.33569 -16.75492 -16.70147 -16.48075 -16.06607 -15.89489 -15.72761 -15.59062 -15.41824 -15.27023 -14.94547 -14.73238 -14.62729 -14.27139 -14.11965 -13.92638 -13.86515 -13.79186 -13.61534 -13.30737 -13.22518 -13.06894 -12.78941 -12.54655 -12.43906 -12.25662 -11.88900 -11.84082 -11.73266 -11.66821 -11.46561 -10.77343 -10.47855 -10.27181 -10.11768 -9.74035 -9.55401 -9.52835 -5.07638 -0.35768 0.03202 0.46278 0.58106 1.15841 1.48535 1.72952 1.82905 1.88580 2.52696 2.79073 3.10237 3.11508 3.21314 3.26330 3.41672 3.42986 3.53725 3.62155 3.70748 3.72253 3.97079 4.02514 4.05743 4.12012 4.18048 4.25756 4.29587 4.32421 4.46534 4.51904 4.52364 4.54631 4.56768 4.66660 4.67468 4.73562 4.86654 4.90048 4.94590 5.00514 5.10394 5.15056 5.19361 5.29120 5.36286 5.54640 5.62338 5.70098 5.75963 6.14400 6.35363 6.42658 6.73759 7.18486 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.096 4.096 3 C -0.068 4.068 4 C -0.166 4.166 5 C 0.562 3.438 6 O -0.498 6.498 7 N -0.714 5.714 8 C 0.198 3.802 9 C -0.074 4.074 10 C -0.112 4.112 11 C -0.117 4.117 12 C -0.119 4.119 13 C -0.118 4.118 14 C -0.098 4.098 15 C -0.154 4.154 16 C 0.066 3.934 17 H 0.111 0.889 18 F -0.203 7.203 19 C -0.151 4.151 20 C 0.192 3.808 21 O -0.467 6.467 22 C -0.106 4.106 23 C -0.067 4.067 24 O -0.527 6.527 25 Si 0.684 3.316 26 C -0.075 4.075 27 H 0.074 0.926 28 H 0.072 0.928 29 H 0.071 0.929 30 H 0.131 0.869 31 H 0.402 0.598 32 H 0.123 0.877 33 H 0.124 0.876 34 H 0.122 0.878 35 H 0.121 0.879 36 H 0.115 0.885 37 H 0.092 0.908 38 H 0.108 0.892 39 H 0.113 0.887 40 H 0.089 0.911 41 H 0.393 0.607 42 H 0.075 0.925 43 H 0.379 0.621 44 H -0.253 1.253 45 H -0.259 1.259 46 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.326 -1.221 3.186 6.325 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.097 4.097 3 C -0.087 4.087 4 C -0.170 4.170 5 C 0.350 3.650 6 O -0.372 6.372 7 N -0.368 5.368 8 C 0.111 3.889 9 C -0.075 4.075 10 C -0.130 4.130 11 C -0.135 4.135 12 C -0.137 4.137 13 C -0.136 4.136 14 C -0.117 4.117 15 C -0.192 4.192 16 C 0.030 3.970 17 H 0.128 0.872 18 F -0.183 7.183 19 C -0.189 4.189 20 C 0.145 3.855 21 O -0.278 6.278 22 C -0.106 4.106 23 C -0.176 4.176 24 O -0.334 6.334 25 Si 0.585 3.415 26 C -0.093 4.093 27 H 0.093 0.907 28 H 0.091 0.909 29 H 0.090 0.910 30 H 0.149 0.851 31 H 0.239 0.761 32 H 0.141 0.859 33 H 0.142 0.858 34 H 0.140 0.860 35 H 0.139 0.861 36 H 0.133 0.867 37 H 0.111 0.889 38 H 0.126 0.874 39 H 0.131 0.869 40 H 0.108 0.892 41 H 0.251 0.749 42 H 0.093 0.907 43 H 0.227 0.773 44 H -0.178 1.178 45 H -0.184 1.184 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -5.129 -1.385 2.265 5.775 hybrid contribution 0.554 -0.357 -0.480 0.815 sum -4.575 -1.743 1.785 5.211 Atomic orbital electron populations 1.20836 0.89955 1.03552 1.02997 1.19769 0.96792 0.92167 1.00932 1.21116 0.92091 0.98281 0.97191 1.20314 0.93900 0.93231 1.09519 1.17992 0.87425 0.82931 0.76677 1.90871 1.12717 1.87011 1.46584 1.45601 1.10228 1.04342 1.76649 1.19591 0.92993 0.83820 0.92468 1.19567 0.97410 0.96753 0.93762 1.20919 0.96083 0.97460 0.98525 1.21125 0.99636 0.99980 0.92747 1.21199 0.97935 0.96255 0.98281 1.21154 0.96589 0.97647 0.98208 1.20867 0.99651 0.98868 0.92267 1.24027 0.97430 1.03673 0.94057 1.23122 0.98720 0.87280 0.87848 0.87170 1.92833 1.94380 1.58479 1.72622 1.24002 1.01343 0.99185 0.94407 1.18205 0.83843 0.89674 0.93765 1.84814 1.14139 1.95880 1.32919 1.19606 0.93409 0.93535 1.04075 1.24633 1.03282 1.01346 0.88363 1.86647 1.73379 1.44268 1.29142 0.95237 0.79985 0.76779 0.89471 1.21131 0.92794 0.98582 0.96745 0.90688 0.90860 0.90962 0.85118 0.76108 0.85890 0.85803 0.85999 0.86116 0.86703 0.88912 0.87398 0.86882 0.89209 0.74875 0.90743 0.77274 1.17808 1.18363 0.84628 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.41 10.00 36.00 0.36 0.77 16 2 C -0.10 0.13 5.87 -104.68 -0.61 -0.49 16 3 C -0.07 0.10 9.17 -39.20 -0.36 -0.26 16 4 C -0.17 -0.19 5.89 -104.85 -0.62 -0.80 16 5 C 0.56 1.10 6.44 -12.47 -0.08 1.02 16 6 O -0.50 -2.73 13.63 -16.60 -0.23 -2.95 16 7 N -0.71 0.61 4.07 -48.95 -0.20 0.41 16 8 C 0.20 -0.01 0.94 -132.16 -0.12 -0.13 16 9 C -0.07 -0.15 4.85 -104.63 -0.51 -0.66 16 10 C -0.11 -0.20 8.70 -39.58 -0.34 -0.54 16 11 C -0.12 -0.21 10.05 -39.58 -0.40 -0.61 16 12 C -0.12 -0.26 10.05 -39.58 -0.40 -0.65 16 13 C -0.12 -0.32 10.05 -39.58 -0.40 -0.72 16 14 C -0.10 -0.29 9.05 -39.58 -0.36 -0.64 16 15 C -0.15 -0.08 6.61 -25.92 -0.17 -0.25 16 16 C 0.07 -0.05 5.58 -25.92 -0.14 -0.19 16 17 H 0.11 -0.26 8.14 -51.93 -0.42 -0.68 16 18 F -0.20 -0.42 17.41 2.25 0.04 -0.38 16 19 C -0.15 0.27 7.20 -25.92 -0.19 0.08 16 20 C 0.19 0.44 6.69 -38.69 -0.26 0.18 16 21 O -0.47 -1.50 10.91 -40.53 -0.44 -1.94 16 22 C -0.11 -0.12 5.30 -104.51 -0.55 -0.67 16 23 C -0.07 -0.01 2.37 36.01 0.09 0.08 16 24 O -0.53 -1.18 12.86 -35.23 -0.45 -1.64 16 25 Si 0.68 -1.01 30.18 -169.99 -5.13 -6.15 16 26 C -0.07 0.02 8.30 -39.53 -0.33 -0.30 16 27 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 28 H 0.07 -0.30 8.08 -51.93 -0.42 -0.72 16 29 H 0.07 -0.33 8.08 -51.93 -0.42 -0.75 16 30 H 0.13 -0.58 6.41 -52.49 -0.34 -0.91 16 31 H 0.40 -1.47 6.76 -40.82 -0.28 -1.75 16 32 H 0.12 0.02 6.56 -52.49 -0.34 -0.33 16 33 H 0.12 -0.01 8.06 -52.49 -0.42 -0.43 16 34 H 0.12 0.05 8.06 -52.49 -0.42 -0.38 16 35 H 0.12 0.16 8.06 -52.49 -0.42 -0.26 16 36 H 0.11 0.29 6.86 -52.49 -0.36 -0.07 16 37 H 0.09 0.17 6.94 -51.93 -0.36 -0.19 16 38 H 0.11 0.07 6.23 -51.93 -0.32 -0.26 16 39 H 0.11 -0.17 7.78 -51.93 -0.40 -0.57 16 40 H 0.09 -0.32 8.11 -51.92 -0.42 -0.75 16 41 H 0.39 -0.28 9.06 45.56 0.41 0.13 16 42 H 0.07 -0.11 7.83 -51.93 -0.41 -0.52 16 43 H 0.38 -0.69 8.74 45.56 0.40 -0.29 16 44 H -0.25 -0.28 6.75 56.52 0.38 0.10 16 45 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 46 H 0.14 -0.22 4.87 -52.48 -0.26 -0.48 16 LS Contribution 378.80 15.07 5.71 5.71 Total: 0.00 -10.35 378.80 -10.95 -21.30 By element: Atomic # 1 Polarization: -4.73 SS G_CDS: -4.85 Total: -9.57 kcal Atomic # 6 Polarization: 0.60 SS G_CDS: -5.40 Total: -4.80 kcal Atomic # 7 Polarization: 0.61 SS G_CDS: -0.20 Total: 0.41 kcal Atomic # 8 Polarization: -5.40 SS G_CDS: -1.12 Total: -6.53 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.04 Total: -0.38 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.13 Total: -6.15 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -10.35 -10.95 -21.30 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.396 kcal (2) G-P(sol) polarization free energy of solvation -10.351 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.747 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.949 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.300 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.696 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds