Wall clock time and date at job start Sat Mar 6 2021 20:40:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.37789 * 119.85132 * 2 1 4 4 C 1.39707 * 119.90830 * 180.02562 * 3 2 1 5 5 C 1.47533 * 120.19209 * 180.02562 * 4 3 2 6 6 O 1.21596 * 120.00028 * 179.97438 * 5 4 3 7 7 N 1.34773 * 119.99874 * 359.97429 * 5 4 3 8 8 C 1.46508 * 120.00071 * 175.24780 * 7 5 4 9 9 C 1.50690 * 112.84997 * 72.62612 * 8 7 5 10 10 C 1.38237 * 120.00258 * 192.92377 * 9 8 7 11 11 C 1.38235 * 120.00415 * 179.79002 * 10 9 8 12 12 C 1.38234 * 119.99684 * 0.44344 * 11 10 9 13 13 C 1.38238 * 120.00250 * 359.81434 * 12 11 10 14 14 C 1.38230 * 119.99822 * 359.97434 * 13 12 11 15 15 C 1.53783 * 113.61075 * 301.43223 * 8 7 5 16 16 C 1.53780 * 87.08087 * 270.88536 * 15 8 7 17 17 H 1.08997 * 113.61877 * 89.20041 * 16 15 8 18 18 F 1.39905 * 113.61202 * 220.02174 * 16 15 8 19 19 C 1.53779 * 87.08149 * 334.56578 * 16 15 8 20 20 C 1.40140 * 119.61844 * 0.02562 * 4 3 2 21 21 O 1.35650 * 120.15137 * 179.97438 * 20 4 3 22 22 C 1.38707 * 119.69789 * 0.25441 * 20 4 3 23 23 C 1.50706 * 119.95662 * 179.72077 * 22 20 4 24 24 O 1.42891 * 109.47046 * 285.00243 * 23 22 20 25 25 Si 1.86301 * 109.47050 * 164.99889 * 23 22 20 26 26 C 1.38060 * 120.08397 * 359.46847 * 22 20 4 27 27 H 1.08995 * 109.47591 * 89.99503 * 1 2 3 28 28 H 1.09002 * 109.47154 * 209.99794 * 1 2 3 29 29 H 1.09002 * 109.47075 * 329.99580 * 1 2 3 30 30 H 1.07991 * 120.04726 * 0.02909 * 3 2 1 31 31 H 0.97001 * 120.00502 * 355.24838 * 7 5 4 32 32 H 1.08000 * 119.99584 * 0.02562 * 10 9 8 33 33 H 1.07996 * 119.99909 * 180.28212 * 11 10 9 34 34 H 1.07997 * 119.99979 * 179.83337 * 12 11 10 35 35 H 1.07993 * 120.00070 * 179.97438 * 13 12 11 36 36 H 1.07999 * 120.00294 * 179.97438 * 14 13 12 37 37 H 1.08997 * 113.61631 * 25.43427 * 15 8 7 38 38 H 1.08998 * 113.61296 * 156.33765 * 15 8 7 39 39 H 1.08998 * 113.62009 * 270.88299 * 19 16 15 40 40 H 1.09007 * 113.61227 * 139.97642 * 19 16 15 41 41 H 0.96698 * 113.99910 * 90.00150 * 21 20 4 42 42 H 1.08996 * 109.46607 * 45.00162 * 23 22 20 43 43 H 0.96700 * 113.99988 * 180.02562 * 24 23 22 44 44 H 1.48509 * 109.99751 * 59.99961 * 25 23 22 45 45 H 1.48499 * 110.00134 * 181.32129 * 25 23 22 46 46 H 1.08005 * 119.80374 * 180.25361 * 26 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5898 1.1965 -0.0005 5 6 4.3305 2.4724 0.0000 6 8 5.5465 2.4695 0.0000 7 7 3.6594 3.6411 0.0005 8 6 4.3911 4.9060 0.1062 9 6 5.1365 5.2579 -1.1552 10 6 6.0825 6.2658 -1.1407 11 6 6.7695 6.5858 -2.2968 12 6 6.5039 5.9040 -3.4696 13 6 5.5542 4.8996 -3.4855 14 6 4.8704 4.5768 -2.3284 15 6 5.2467 5.0181 1.3791 16 6 4.0072 5.6163 2.0650 17 1 3.3586 4.8697 2.5231 18 9 4.3011 6.6810 2.9238 19 6 3.5458 6.0616 0.6673 20 6 4.2837 -0.0211 -0.0016 21 8 5.6401 -0.0324 -0.0027 22 6 3.5770 -1.2147 -0.0075 23 6 4.3172 -2.5274 -0.0151 24 8 4.8540 -2.7641 -1.3180 25 14 3.1447 -3.9041 0.4331 26 6 2.1965 -1.2017 -0.0012 27 1 -0.3634 0.0001 -1.0276 28 1 -0.3633 -0.8900 0.5138 29 1 -0.3633 0.8900 0.5139 30 1 1.6512 2.1293 0.0005 31 1 2.6919 3.6449 -0.0690 32 1 6.2875 6.8008 -0.2252 33 1 7.5117 7.3701 -2.2843 34 1 7.0387 6.1557 -4.3735 35 1 5.3465 4.3673 -4.4018 36 1 4.1281 3.7924 -2.3407 37 1 5.5495 4.0542 1.7880 38 1 6.0761 5.7194 1.2873 39 1 3.9101 7.0482 0.3809 40 1 2.4753 5.9400 0.5016 41 1 6.0341 -0.0361 0.8804 42 1 5.1291 -2.4908 0.7112 43 1 5.3443 -3.5938 -1.3967 44 1 2.0330 -3.9644 -0.5497 45 1 3.8695 -5.1999 0.4603 46 1 1.6509 -2.1338 -0.0016 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_13422088.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:40:12 Heat of formation + Delta-G solvation = -61.870997 kcal Electronic energy + Delta-G solvation = -32626.395495 eV Core-core repulsion = 28170.479407 eV Total energy + Delta-G solvation = -4455.916088 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -48.61636 -42.18528 -41.15612 -39.57802 -38.50344 -38.04652 -37.70889 -34.61975 -33.17170 -32.66667 -31.89017 -31.68561 -27.54709 -27.17607 -26.81238 -26.33966 -24.84853 -23.56413 -22.56879 -21.85471 -21.62073 -20.39852 -19.53438 -18.63406 -18.61791 -18.36296 -17.61105 -17.33175 -16.78110 -16.74279 -16.53969 -16.09200 -15.95468 -15.78919 -15.68714 -15.44086 -15.34716 -14.90662 -14.80345 -14.44607 -14.37120 -14.08689 -14.00320 -13.93942 -13.77794 -13.53225 -13.34830 -13.09861 -12.99512 -12.65601 -12.58142 -12.39710 -12.31941 -11.99496 -11.86968 -11.75254 -11.70215 -11.43739 -10.89388 -10.48870 -10.34450 -10.08875 -9.89283 -9.65126 -9.50491 -4.97973 -0.35311 0.07172 0.33455 0.42717 1.22585 1.55565 1.69751 1.84401 1.90990 2.53068 2.69827 3.13565 3.16705 3.22466 3.32589 3.41352 3.44411 3.60656 3.65982 3.81155 3.82243 3.95772 4.02150 4.08615 4.13309 4.16554 4.19981 4.32912 4.49470 4.50400 4.55441 4.57868 4.62374 4.66138 4.69396 4.80466 4.83877 4.89144 4.96767 4.99157 5.00836 5.11137 5.18119 5.24361 5.33038 5.42222 5.49354 5.55798 5.64897 5.67728 6.02643 6.40520 6.53380 6.73829 7.14442 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.095 4.095 3 C -0.060 4.060 4 C -0.179 4.179 5 C 0.563 3.437 6 O -0.541 6.541 7 N -0.697 5.697 8 C 0.197 3.803 9 C -0.080 4.080 10 C -0.122 4.122 11 C -0.125 4.125 12 C -0.131 4.131 13 C -0.134 4.134 14 C -0.115 4.115 15 C -0.159 4.159 16 C 0.069 3.931 17 H 0.131 0.869 18 F -0.218 7.218 19 C -0.138 4.138 20 C 0.166 3.834 21 O -0.490 6.490 22 C -0.120 4.120 23 C -0.087 4.087 24 O -0.557 6.557 25 Si 0.779 3.221 26 C -0.081 4.081 27 H 0.077 0.923 28 H 0.081 0.919 29 H 0.090 0.910 30 H 0.164 0.836 31 H 0.418 0.582 32 H 0.136 0.864 33 H 0.141 0.859 34 H 0.136 0.864 35 H 0.128 0.872 36 H 0.114 0.886 37 H 0.075 0.925 38 H 0.102 0.898 39 H 0.112 0.888 40 H 0.117 0.883 41 H 0.402 0.598 42 H 0.084 0.916 43 H 0.392 0.608 44 H -0.286 1.286 45 H -0.288 1.288 46 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.519 -0.667 3.790 8.446 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.095 4.095 3 C -0.078 4.078 4 C -0.183 4.183 5 C 0.351 3.649 6 O -0.418 6.418 7 N -0.352 5.352 8 C 0.110 3.890 9 C -0.081 4.081 10 C -0.140 4.140 11 C -0.143 4.143 12 C -0.149 4.149 13 C -0.152 4.152 14 C -0.133 4.133 15 C -0.198 4.198 16 C 0.033 3.967 17 H 0.148 0.852 18 F -0.199 7.199 19 C -0.176 4.176 20 C 0.120 3.880 21 O -0.302 6.302 22 C -0.121 4.121 23 C -0.194 4.194 24 O -0.367 6.367 25 Si 0.683 3.317 26 C -0.098 4.098 27 H 0.096 0.904 28 H 0.100 0.900 29 H 0.108 0.892 30 H 0.181 0.819 31 H 0.257 0.743 32 H 0.154 0.846 33 H 0.159 0.841 34 H 0.154 0.846 35 H 0.146 0.854 36 H 0.132 0.868 37 H 0.094 0.906 38 H 0.120 0.880 39 H 0.130 0.870 40 H 0.136 0.864 41 H 0.261 0.739 42 H 0.102 0.898 43 H 0.242 0.758 44 H -0.213 1.213 45 H -0.215 1.215 46 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -7.343 -0.804 2.881 7.929 hybrid contribution 1.270 -0.546 -0.693 1.546 sum -6.073 -1.350 2.188 6.594 Atomic orbital electron populations 1.20922 0.87987 1.04955 1.03521 1.20098 0.98138 0.91672 0.99579 1.21449 0.90996 0.99820 0.95566 1.20372 0.95002 0.92394 1.10533 1.18176 0.86984 0.83776 0.75919 1.90847 1.14588 1.87608 1.48796 1.45428 1.10911 1.03397 1.75436 1.19602 0.93450 0.84653 0.91309 1.19815 0.97539 0.96510 0.94262 1.21166 0.96054 0.97648 0.99127 1.21426 0.99897 1.00313 0.92675 1.21445 0.98048 0.96254 0.99141 1.21381 0.97045 0.98173 0.98649 1.20991 1.00215 0.99291 0.92847 1.24027 0.98121 1.02822 0.94827 1.23280 0.98105 0.87093 0.88183 0.85184 1.92802 1.94524 1.59353 1.73219 1.23956 1.02651 0.98160 0.92845 1.18508 0.83530 0.90747 0.95235 1.84771 1.15262 1.96057 1.34106 1.19779 0.94151 0.93515 1.04665 1.25049 1.04420 1.02167 0.87765 1.86595 1.74000 1.45573 1.30539 0.94182 0.76745 0.73431 0.87362 1.21368 0.92327 0.99730 0.96426 0.90446 0.90012 0.89151 0.81854 0.74251 0.84643 0.84119 0.84581 0.85446 0.86801 0.90604 0.87969 0.86957 0.86436 0.73878 0.89778 0.75797 1.21286 1.21520 0.83519 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.09 10.00 71.23 0.71 1.80 16 2 C -0.09 0.37 5.87 -19.90 -0.12 0.26 16 3 C -0.06 0.24 9.17 22.52 0.21 0.45 16 4 C -0.18 -0.51 5.89 -20.01 -0.12 -0.62 16 5 C 0.56 2.73 6.44 86.70 0.56 3.29 16 6 O -0.54 -7.12 13.63 16.90 0.23 -6.89 16 7 N -0.70 1.45 4.07 -427.05 -1.74 -0.29 16 8 C 0.20 -0.02 0.94 3.38 0.00 -0.02 16 9 C -0.08 -0.38 4.85 -19.87 -0.10 -0.48 16 10 C -0.12 -0.51 8.70 22.27 0.19 -0.31 16 11 C -0.13 -0.52 10.05 22.27 0.22 -0.29 16 12 C -0.13 -0.66 10.05 22.27 0.22 -0.44 16 13 C -0.13 -0.89 10.05 22.27 0.22 -0.67 16 14 C -0.12 -0.79 9.05 22.27 0.20 -0.59 16 15 C -0.16 -0.27 6.61 31.12 0.21 -0.07 16 16 C 0.07 -0.15 5.58 31.12 0.17 0.02 16 17 H 0.13 -0.82 8.14 -2.39 -0.02 -0.84 16 18 F -0.22 -0.81 17.41 44.97 0.78 -0.03 16 19 C -0.14 0.67 7.20 31.12 0.22 0.90 16 20 C 0.17 1.02 6.69 22.84 0.15 1.18 16 21 O -0.49 -4.46 10.91 -68.73 -0.75 -5.21 16 22 C -0.12 -0.38 5.30 -19.79 -0.10 -0.48 16 23 C -0.09 -0.11 2.37 71.24 0.17 0.06 16 24 O -0.56 -3.41 12.86 -148.98 -1.92 -5.33 16 25 Si 0.78 -2.20 30.18 68.60 2.07 -0.12 16 26 C -0.08 0.07 8.30 22.30 0.19 0.26 16 27 H 0.08 -0.70 8.14 -2.39 -0.02 -0.72 16 28 H 0.08 -0.86 8.08 -2.39 -0.02 -0.88 16 29 H 0.09 -1.13 8.08 -2.39 -0.02 -1.15 16 30 H 0.16 -1.89 6.41 -2.92 -0.02 -1.91 16 31 H 0.42 -3.79 6.76 -92.71 -0.63 -4.42 16 32 H 0.14 0.10 6.56 -2.91 -0.02 0.09 16 33 H 0.14 -0.02 8.06 -2.91 -0.02 -0.05 16 34 H 0.14 0.16 8.06 -2.91 -0.02 0.14 16 35 H 0.13 0.51 8.06 -2.91 -0.02 0.48 16 36 H 0.11 0.69 6.86 -2.91 -0.02 0.67 16 37 H 0.08 0.40 6.94 -2.39 -0.02 0.39 16 38 H 0.10 0.25 6.23 -2.39 -0.01 0.23 16 39 H 0.11 -0.46 7.78 -2.39 -0.02 -0.48 16 40 H 0.12 -1.20 8.11 -2.38 -0.02 -1.22 16 41 H 0.40 0.68 9.06 -74.06 -0.67 0.01 16 42 H 0.08 -0.13 7.83 -2.39 -0.02 -0.15 16 43 H 0.39 -0.79 8.74 -74.06 -0.65 -1.43 16 44 H -0.29 -0.69 6.75 99.48 0.67 -0.01 16 45 H -0.29 -0.53 7.11 99.48 0.71 0.17 16 46 H 0.15 -0.56 4.87 -2.91 -0.01 -0.58 16 Total: 0.00 -26.32 378.80 1.02 -25.30 By element: Atomic # 1 Polarization: -10.78 SS G_CDS: -0.87 Total: -11.66 kcal Atomic # 6 Polarization: 1.01 SS G_CDS: 3.22 Total: 4.23 kcal Atomic # 7 Polarization: 1.45 SS G_CDS: -1.74 Total: -0.29 kcal Atomic # 8 Polarization: -14.99 SS G_CDS: -2.43 Total: -17.43 kcal Atomic # 9 Polarization: -0.81 SS G_CDS: 0.78 Total: -0.03 kcal Atomic # 14 Polarization: -2.20 SS G_CDS: 2.07 Total: -0.12 kcal Total: -26.32 1.02 -25.30 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_13422088.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.574 kcal (2) G-P(sol) polarization free energy of solvation -26.321 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.896 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.025 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.297 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.871 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds