Wall clock time and date at job start Sat Mar 6 2021 20:40:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86300 * 109.47285 * 2 1 4 4 C 1.50703 * 109.46830 * 240.00118 * 2 1 3 5 5 C 1.32699 * 124.68242 * 300.28154 * 4 2 1 6 6 C 1.44503 * 113.09567 * 180.15312 * 5 4 2 7 7 C 1.47043 * 123.49160 * 179.83527 * 6 5 4 8 8 O 1.21654 * 120.00171 * 179.72881 * 7 6 5 9 9 N 1.34777 * 119.99743 * 359.45080 * 7 6 5 10 10 C 1.46503 * 119.99613 * 175.29574 * 9 7 6 11 11 C 1.50693 * 112.85593 * 65.09222 * 10 9 7 12 12 C 1.38231 * 120.00639 * 197.58811 * 11 10 9 13 13 C 1.38236 * 120.00347 * 179.74200 * 12 11 10 14 14 C 1.38236 * 119.99423 * 0.55092 * 13 12 11 15 15 C 1.38222 * 120.00700 * 359.70063 * 14 13 12 16 16 C 1.38238 * 119.99784 * 17.85372 * 11 10 9 17 17 C 1.53781 * 113.61332 * 293.89333 * 10 9 7 18 18 C 1.53781 * 87.08458 * 270.88686 * 17 10 9 19 19 H 1.08998 * 113.61768 * 89.11370 * 18 17 10 20 20 F 1.39898 * 113.61827 * 220.02273 * 18 17 10 21 21 C 1.53784 * 113.61072 * 196.28824 * 10 9 7 22 22 C 1.36226 * 113.01833 * 359.56489 * 6 5 4 23 23 Cl 1.73597 * 124.60880 * 180.20950 * 22 6 5 24 24 S 1.70446 * 110.78704 * 0.23303 * 22 6 5 25 25 H 0.96705 * 113.99812 * 59.99299 * 1 2 3 26 26 H 1.08992 * 109.46788 * 119.99993 * 2 1 3 27 27 H 1.48497 * 110.00069 * 298.68071 * 3 2 1 28 28 H 1.48503 * 110.00003 * 59.99897 * 3 2 1 29 29 H 1.08000 * 123.45304 * 359.94552 * 5 4 2 30 30 H 0.96992 * 120.00139 * 355.29507 * 9 7 6 31 31 H 1.08007 * 119.99744 * 359.97438 * 12 11 10 32 32 H 1.07999 * 119.99852 * 180.27032 * 13 12 11 33 33 H 1.08005 * 119.99581 * 179.72257 * 14 13 12 34 34 H 1.07998 * 120.00461 * 180.02562 * 15 14 13 35 35 H 1.08002 * 119.99870 * 0.02562 * 16 11 10 36 36 H 1.08996 * 113.61564 * 25.43770 * 17 10 9 37 37 H 1.09003 * 113.61311 * 156.33992 * 17 10 9 38 38 H 1.09005 * 113.61305 * 203.66180 * 21 10 9 39 39 H 1.08996 * 113.61323 * 334.56510 * 21 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6642 -1.9741 -1.5348 6 6 2.2769 -2.4010 -2.7719 7 6 2.1337 -3.7568 -3.3227 8 8 2.6739 -4.0467 -4.3735 9 7 1.4086 -4.6801 -2.6606 10 6 1.1798 -5.9981 -3.2579 11 6 2.4479 -6.7964 -3.4176 12 6 2.4789 -7.8806 -4.2745 13 6 3.6437 -8.6097 -4.4250 14 6 4.7743 -8.2612 -3.7100 15 6 4.7420 -7.1802 -2.8492 16 6 3.5788 -6.4477 -2.7031 17 6 0.3138 -5.9568 -4.5281 18 6 -0.9076 -6.1040 -3.6054 19 1 -1.3080 -5.1524 -3.2558 20 9 -1.8939 -6.9564 -4.1129 21 6 0.0362 -6.7844 -2.5956 22 6 2.9961 -1.4155 -3.3780 23 17 3.8500 -1.5985 -4.8783 24 16 2.9440 0.0215 -2.4628 25 1 -0.3933 0.4418 -0.7650 26 1 1.7923 -0.5138 0.8899 27 1 1.5881 2.4585 -1.2242 28 1 1.5616 2.4679 1.2085 29 1 1.0544 -2.6186 -0.9190 30 1 1.0383 -4.4719 -1.7887 31 1 1.5941 -8.1560 -4.8292 32 1 3.6691 -9.4541 -5.0977 33 1 5.6831 -8.8336 -3.8242 34 1 5.6254 -6.9078 -2.2909 35 1 3.5533 -5.6034 -2.0301 36 1 0.3526 -5.0019 -5.0521 37 1 0.4671 -6.8100 -5.1889 38 1 0.1137 -7.8635 -2.7291 39 1 -0.1489 -6.4972 -1.5606 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_13431040.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:40:25 Heat of formation + Delta-G solvation = -18.362158 kcal Electronic energy + Delta-G solvation = -28589.810169 eV Core-core repulsion = 24339.353031 eV Total energy + Delta-G solvation = -4250.457138 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.044 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -48.56134 -41.98887 -40.17956 -39.07148 -38.53107 -37.86300 -37.06738 -34.26678 -31.96080 -31.73127 -31.59551 -27.28478 -27.12724 -26.67045 -25.10003 -23.44659 -22.59981 -22.28122 -20.99448 -20.31385 -19.50598 -18.54827 -18.09058 -17.96148 -17.35879 -16.82020 -16.68141 -16.57183 -16.06735 -15.97715 -15.88274 -15.74556 -15.56187 -15.12541 -14.79064 -14.45772 -14.42923 -14.27916 -14.04851 -13.86768 -13.80013 -13.60113 -13.32196 -13.05912 -12.61482 -12.59504 -12.53275 -12.25029 -12.05718 -11.94386 -11.86226 -11.69541 -11.47605 -11.05418 -10.75587 -10.27623 -9.95764 -9.78516 -9.73668 -9.52224 -5.26506 -0.65988 -0.26206 0.37209 0.46551 0.58191 0.61394 0.98716 1.04004 1.36157 1.72883 1.93268 2.19292 2.79238 3.01631 3.08626 3.20619 3.27934 3.42378 3.50017 3.68833 3.75985 3.79448 4.01528 4.11382 4.17120 4.23305 4.27308 4.33694 4.46132 4.51382 4.52742 4.60505 4.66476 4.72542 4.81976 4.85406 4.99053 5.10155 5.19144 5.34784 5.61831 5.69692 5.74946 6.09349 6.14181 6.32147 7.13569 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.521 6.521 2 C -0.031 4.031 3 Si 0.646 3.354 4 C -0.233 4.233 5 C -0.072 4.072 6 C -0.161 4.161 7 C 0.577 3.423 8 O -0.497 6.497 9 N -0.710 5.710 10 C 0.200 3.800 11 C -0.069 4.069 12 C -0.111 4.111 13 C -0.117 4.117 14 C -0.119 4.119 15 C -0.118 4.118 16 C -0.097 4.097 17 C -0.156 4.156 18 C 0.066 3.934 19 H 0.111 0.889 20 F -0.202 7.202 21 C -0.151 4.151 22 C -0.114 4.114 23 Cl 0.028 6.972 24 S 0.240 5.760 25 H 0.380 0.620 26 H 0.132 0.868 27 H -0.236 1.236 28 H -0.229 1.229 29 H 0.157 0.843 30 H 0.404 0.596 31 H 0.123 0.877 32 H 0.123 0.877 33 H 0.121 0.879 34 H 0.121 0.879 35 H 0.115 0.885 36 H 0.089 0.911 37 H 0.109 0.891 38 H 0.113 0.887 39 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.876 2.237 4.331 4.953 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.328 6.328 2 C -0.143 4.143 3 Si 0.544 3.456 4 C -0.351 4.351 5 C -0.102 4.102 6 C -0.179 4.179 7 C 0.362 3.638 8 O -0.371 6.371 9 N -0.363 5.363 10 C 0.112 3.888 11 C -0.071 4.071 12 C -0.130 4.130 13 C -0.135 4.135 14 C -0.137 4.137 15 C -0.136 4.136 16 C -0.115 4.115 17 C -0.195 4.195 18 C 0.030 3.970 19 H 0.128 0.872 20 F -0.183 7.183 21 C -0.189 4.189 22 C -0.261 4.261 23 Cl 0.058 6.942 24 S 0.505 5.495 25 H 0.228 0.772 26 H 0.150 0.850 27 H -0.160 1.160 28 H -0.152 1.152 29 H 0.174 0.826 30 H 0.240 0.760 31 H 0.141 0.859 32 H 0.141 0.859 33 H 0.139 0.861 34 H 0.139 0.861 35 H 0.133 0.867 36 H 0.108 0.892 37 H 0.127 0.873 38 H 0.132 0.868 39 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 1.805 3.987 3.755 5.767 hybrid contribution -1.656 -1.539 -0.122 2.264 sum 0.149 2.447 3.634 4.384 Atomic orbital electron populations 1.86643 1.16903 1.79860 1.49399 1.24395 0.84004 1.10072 0.95874 0.95257 0.91605 0.75113 0.83621 1.24760 1.07888 0.99265 1.03138 1.20995 0.99398 0.95095 0.94687 1.20192 1.04841 0.95315 0.97597 1.17371 0.78669 0.83251 0.84467 1.90925 1.44605 1.79695 1.21838 1.45520 1.55778 1.12468 1.22564 1.19594 0.91669 0.82409 0.95093 1.19479 0.94168 0.95727 0.97684 1.20933 0.98501 0.95340 0.98184 1.21119 0.92949 0.99852 0.99563 1.21187 0.98458 0.97341 0.96700 1.21130 0.97883 0.95717 0.98870 1.20835 0.92523 0.99023 0.99103 1.24068 0.93043 1.05426 0.96939 1.23170 0.85155 0.93062 0.95595 0.87172 1.92832 1.64608 1.72534 1.88303 1.24046 0.92884 1.01961 0.99991 1.25562 1.02836 1.00840 0.96847 1.98450 1.73205 1.97024 1.25567 1.83405 1.46470 1.08380 1.11261 0.77220 0.85024 1.15991 1.15225 0.82560 0.76037 0.85916 0.85865 0.86051 0.86143 0.86740 0.89194 0.87303 0.86844 0.89146 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.93 12.85 -35.23 -0.45 0.47 16 2 C -0.03 0.09 2.95 36.01 0.11 0.20 16 3 Si 0.65 -1.88 30.91 -169.99 -5.25 -7.14 16 4 C -0.23 0.55 5.68 -36.19 -0.21 0.34 16 5 C -0.07 0.15 9.71 -39.00 -0.38 -0.23 16 6 C -0.16 -0.05 5.98 -104.59 -0.63 -0.68 16 7 C 0.58 0.87 6.36 -12.69 -0.08 0.79 16 8 O -0.50 -2.43 13.40 5.23 0.07 -2.36 16 9 N -0.71 0.81 4.27 -49.10 -0.21 0.60 16 10 C 0.20 -0.05 0.92 -132.16 -0.12 -0.17 16 11 C -0.07 -0.11 4.51 -104.63 -0.47 -0.58 16 12 C -0.11 -0.17 8.94 -39.58 -0.35 -0.53 16 13 C -0.12 -0.18 10.05 -39.58 -0.40 -0.58 16 14 C -0.12 -0.20 10.05 -39.59 -0.40 -0.60 16 15 C -0.12 -0.23 10.05 -39.59 -0.40 -0.63 16 16 C -0.10 -0.20 8.64 -39.58 -0.34 -0.55 16 17 C -0.16 -0.07 6.72 -25.92 -0.17 -0.24 16 18 C 0.07 -0.04 5.58 -25.77 -0.14 -0.19 16 19 H 0.11 -0.23 8.14 -51.93 -0.42 -0.66 16 20 F -0.20 -0.45 17.41 2.25 0.04 -0.41 16 21 C -0.15 0.27 7.21 -25.77 -0.19 0.08 16 22 C -0.11 -0.11 6.87 30.01 0.21 0.10 16 23 Cl 0.03 0.08 27.20 -51.86 -1.41 -1.33 16 24 S 0.24 -0.38 20.17 -107.50 -2.17 -2.55 16 25 H 0.38 -1.65 8.70 45.56 0.40 -1.25 16 26 H 0.13 -0.55 7.96 -51.93 -0.41 -0.96 16 27 H -0.24 0.28 7.11 56.52 0.40 0.68 16 28 H -0.23 0.01 7.11 56.52 0.40 0.41 16 29 H 0.16 -0.66 7.11 -52.49 -0.37 -1.03 16 30 H 0.40 -1.56 7.22 -40.82 -0.29 -1.85 16 31 H 0.12 0.01 6.29 -52.48 -0.33 -0.32 16 32 H 0.12 -0.03 8.06 -52.49 -0.42 -0.45 16 33 H 0.12 -0.01 8.06 -52.48 -0.42 -0.43 16 34 H 0.12 0.05 8.06 -52.49 -0.42 -0.37 16 35 H 0.11 0.16 6.89 -52.49 -0.36 -0.20 16 36 H 0.09 0.16 7.57 -51.93 -0.39 -0.23 16 37 H 0.11 0.05 6.02 -51.93 -0.31 -0.26 16 38 H 0.11 -0.17 7.93 -51.93 -0.41 -0.58 16 39 H 0.09 -0.32 8.09 -51.93 -0.42 -0.74 16 LS Contribution 356.74 15.07 5.38 5.38 Total: 0.00 -7.27 356.74 -11.78 -19.05 By element: Atomic # 1 Polarization: -4.45 SS G_CDS: -3.80 Total: -8.25 kcal Atomic # 6 Polarization: 0.50 SS G_CDS: -3.96 Total: -3.46 kcal Atomic # 7 Polarization: 0.81 SS G_CDS: -0.21 Total: 0.60 kcal Atomic # 8 Polarization: -1.50 SS G_CDS: -0.38 Total: -1.88 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -1.88 SS G_CDS: -5.25 Total: -7.14 kcal Atomic # 16 Polarization: -0.38 SS G_CDS: -2.17 Total: -2.55 kcal Atomic # 17 Polarization: 0.08 SS G_CDS: -1.41 Total: -1.33 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -7.27 -11.78 -19.05 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_13431040.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.684 kcal (2) G-P(sol) polarization free energy of solvation -7.269 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.585 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.777 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.046 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.362 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds