Wall clock time and date at job start Sat Mar 6 2021 20:40:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.47321 * 2 1 4 4 C 1.50708 * 109.47158 * 239.99941 * 2 1 3 5 5 C 1.34173 * 125.43856 * 299.72376 * 4 2 1 6 6 C 1.47027 * 105.95196 * 179.86442 * 5 4 2 7 7 C 1.47376 * 127.18919 * 180.14700 * 6 5 4 8 8 O 1.21615 * 120.00439 * 0.26508 * 7 6 5 9 9 N 1.34777 * 119.99897 * 180.26385 * 7 6 5 10 10 C 1.46503 * 120.00223 * 175.26463 * 9 7 6 11 11 C 1.50704 * 112.84748 * 72.65353 * 10 9 7 12 12 C 1.38236 * 119.99548 * 192.96359 * 11 10 9 13 13 C 1.38244 * 119.99573 * 179.74864 * 12 11 10 14 14 C 1.38238 * 119.99871 * 0.52587 * 13 12 11 15 15 C 1.38238 * 119.99795 * 359.74836 * 14 13 12 16 16 C 1.38229 * 120.00457 * 359.97438 * 15 14 13 17 17 C 1.53781 * 113.61451 * 301.46196 * 10 9 7 18 18 C 1.53774 * 87.07950 * 270.88354 * 17 10 9 19 19 H 1.09002 * 113.61973 * 89.11447 * 18 17 10 20 20 F 1.39905 * 113.61682 * 219.93361 * 18 17 10 21 21 C 1.53778 * 113.61605 * 203.96200 * 10 9 7 22 22 C 1.36408 * 105.61515 * 0.38668 * 6 5 4 23 23 O 1.33651 * 108.39913 * 359.76187 * 22 6 5 24 24 H 0.96693 * 114.00082 * 60.00160 * 1 2 3 25 25 H 1.09001 * 109.47194 * 120.00232 * 2 1 3 26 26 H 1.48503 * 109.99790 * 298.68508 * 3 2 1 27 27 H 1.48500 * 109.99962 * 59.99952 * 3 2 1 28 28 H 1.07995 * 127.02246 * 359.97438 * 5 4 2 29 29 H 0.96994 * 119.99886 * 355.26189 * 9 7 6 30 30 H 1.07995 * 120.00600 * 0.02562 * 12 11 10 31 31 H 1.07997 * 119.99772 * 180.29180 * 13 12 11 32 32 H 1.07994 * 119.99855 * 179.76826 * 14 13 12 33 33 H 1.08000 * 119.99605 * 179.97438 * 15 14 13 34 34 H 1.08000 * 120.00414 * 179.97438 * 16 15 14 35 35 H 1.09002 * 113.60993 * 25.43093 * 17 10 9 36 36 H 1.09000 * 113.61689 * 156.33187 * 17 10 9 37 37 H 1.08998 * 113.61404 * 203.66253 * 21 10 9 38 38 H 1.08997 * 113.61304 * 334.56681 * 21 10 9 39 39 H 1.08000 * 125.79980 * 179.72860 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2305 5 6 1.6797 -1.9897 -1.5475 6 6 2.3683 -2.2327 -2.8236 7 6 2.3968 -3.4879 -3.5955 8 8 1.8009 -4.4664 -3.1876 9 7 3.0832 -3.5513 -4.7537 10 6 3.1983 -4.8250 -5.4682 11 6 1.9111 -5.2422 -6.1316 12 6 1.7679 -6.5297 -6.6142 13 6 0.5852 -6.9139 -7.2180 14 6 -0.4503 -6.0074 -7.3490 15 6 -0.3049 -4.7183 -6.8715 16 6 0.8756 -4.3358 -6.2626 17 6 3.8525 -5.9410 -4.6366 18 6 5.2027 -5.4502 -5.1851 19 1 5.6652 -4.6734 -4.5762 20 9 6.0865 -6.4858 -5.5075 21 6 4.4241 -4.9038 -6.3935 22 6 2.9796 -1.0554 -3.1411 23 8 2.7066 -0.1661 -2.1814 24 1 -0.3933 0.4416 -0.7650 25 1 1.7924 -0.5139 0.8900 26 1 1.5879 2.4585 -1.2242 27 1 1.5616 2.4679 1.2085 28 1 1.0902 -2.6959 -0.9819 29 1 3.5011 -2.7536 -5.1141 30 1 2.5783 -7.2367 -6.5154 31 1 0.4716 -7.9211 -7.5908 32 1 -1.3728 -6.3065 -7.8241 33 1 -1.1137 -4.0101 -6.9742 34 1 0.9893 -3.3285 -5.8899 35 1 3.7429 -5.8050 -3.5607 36 1 3.5860 -6.9450 -4.9668 37 1 4.3138 -5.6243 -7.2039 38 1 4.7759 -3.9306 -6.7358 39 1 3.5824 -0.8730 -4.0184 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_13456056.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:40:28 Heat of formation + Delta-G solvation = -30.150243 kcal Electronic energy + Delta-G solvation = -26458.280000 eV Core-core repulsion = 22443.040806 eV Total energy + Delta-G solvation = -4015.239194 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.110 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -48.58063 -43.80690 -41.89445 -39.67766 -38.47712 -38.21451 -34.67751 -33.74309 -32.08631 -31.78833 -31.52890 -27.26479 -26.97025 -26.20777 -24.74648 -23.48162 -22.52577 -22.33428 -21.22824 -20.38311 -19.47686 -18.60793 -17.93083 -17.63550 -17.40947 -17.36681 -16.94708 -16.61920 -16.26585 -16.03203 -15.89646 -15.68801 -15.53391 -15.25044 -14.70812 -14.33164 -14.21296 -14.00870 -13.97573 -13.88261 -13.80006 -13.54362 -13.32940 -13.00873 -12.60285 -12.30419 -12.13551 -11.93919 -11.77161 -11.52474 -11.09490 -10.95555 -10.82244 -10.33111 -9.89506 -9.79974 -9.59335 -5.05368 0.13990 0.40515 0.52081 0.81252 1.07464 1.40707 1.64342 1.78552 1.87606 2.24568 2.73572 3.05808 3.07105 3.17879 3.27125 3.38122 3.43521 3.54589 3.67104 3.81100 3.98899 4.06267 4.12842 4.22609 4.24810 4.33168 4.42428 4.48404 4.50195 4.51738 4.61318 4.66922 4.70664 4.84952 4.95802 5.04623 5.13952 5.15062 5.30118 5.56557 5.64298 5.69348 5.74374 6.08510 6.17202 6.27939 7.10369 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.519 6.519 2 C -0.036 4.036 3 Si 0.705 3.295 4 C -0.055 4.055 5 C -0.122 4.122 6 C -0.238 4.238 7 C 0.590 3.410 8 O -0.511 6.511 9 N -0.713 5.713 10 C 0.198 3.802 11 C -0.074 4.074 12 C -0.111 4.111 13 C -0.116 4.116 14 C -0.119 4.119 15 C -0.118 4.118 16 C -0.100 4.100 17 C -0.155 4.155 18 C 0.067 3.933 19 H 0.111 0.889 20 F -0.202 7.202 21 C -0.151 4.151 22 C 0.032 3.968 23 O -0.165 6.165 24 H 0.381 0.619 25 H 0.138 0.862 26 H -0.256 1.256 27 H -0.249 1.249 28 H 0.162 0.838 29 H 0.402 0.598 30 H 0.124 0.876 31 H 0.125 0.875 32 H 0.122 0.878 33 H 0.121 0.879 34 H 0.115 0.885 35 H 0.093 0.907 36 H 0.108 0.892 37 H 0.113 0.887 38 H 0.090 0.910 39 H 0.214 0.786 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.215 4.187 -2.254 5.740 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.145 4.145 3 Si 0.604 3.396 4 C -0.104 4.104 5 C -0.142 4.142 6 C -0.243 4.243 7 C 0.377 3.623 8 O -0.386 6.386 9 N -0.366 5.366 10 C 0.111 3.889 11 C -0.075 4.075 12 C -0.129 4.129 13 C -0.134 4.134 14 C -0.137 4.137 15 C -0.136 4.136 16 C -0.118 4.118 17 C -0.193 4.193 18 C 0.030 3.970 19 H 0.129 0.871 20 F -0.183 7.183 21 C -0.189 4.189 22 C -0.039 4.039 23 O -0.060 6.060 24 H 0.229 0.771 25 H 0.155 0.845 26 H -0.180 1.180 27 H -0.173 1.173 28 H 0.180 0.820 29 H 0.237 0.763 30 H 0.142 0.858 31 H 0.143 0.857 32 H 0.140 0.860 33 H 0.139 0.861 34 H 0.133 0.867 35 H 0.112 0.888 36 H 0.127 0.873 37 H 0.132 0.868 38 H 0.108 0.892 39 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 2.771 4.275 -1.354 5.271 hybrid contribution -0.916 -0.087 -0.885 1.276 sum 1.855 4.188 -2.240 5.099 Atomic orbital electron populations 1.86685 1.16559 1.80136 1.49204 1.24392 0.84059 1.12268 0.93791 0.94456 0.91237 0.72967 0.80972 1.22694 0.99839 0.94063 0.93760 1.22533 1.01145 0.95413 0.95103 1.21494 1.08032 0.95009 0.99723 1.17238 0.78246 0.86893 0.79878 1.90859 1.42139 1.36749 1.68815 1.45511 1.56504 1.10938 1.23677 1.19607 0.92043 0.84657 0.92604 1.19569 0.94698 0.94335 0.98912 1.20936 0.98136 0.95160 0.98711 1.21143 0.93333 0.99715 0.99218 1.21209 0.99023 0.93699 0.99731 1.21151 0.97465 0.96567 0.98464 1.20856 0.93119 0.99250 0.98612 1.24045 0.93178 0.99518 1.02581 1.23119 0.87746 0.88476 0.97618 0.87148 1.92835 1.71151 1.60614 1.93659 1.24000 0.93283 1.03926 0.97646 1.24475 0.99537 0.87098 0.92772 1.83694 1.54499 1.40009 1.27835 0.77098 0.84456 1.18046 1.17297 0.82017 0.76269 0.85824 0.85745 0.85955 0.86096 0.86692 0.88818 0.87332 0.86843 0.89155 0.76989 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.09 12.87 -35.23 -0.45 -0.55 16 2 C -0.04 0.05 2.97 36.01 0.11 0.15 16 3 Si 0.70 -1.36 32.09 -169.99 -5.45 -6.81 16 4 C -0.06 0.02 6.20 -35.74 -0.22 -0.20 16 5 C -0.12 -0.14 10.88 -37.45 -0.41 -0.55 16 6 C -0.24 -0.02 6.31 -103.28 -0.65 -0.67 16 7 C 0.59 0.79 6.49 -12.54 -0.08 0.71 16 8 O -0.51 -2.87 15.45 5.26 0.08 -2.79 16 9 N -0.71 1.29 4.12 -49.00 -0.20 1.09 16 10 C 0.20 -0.12 0.94 -132.16 -0.12 -0.24 16 11 C -0.07 -0.10 4.86 -104.62 -0.51 -0.61 16 12 C -0.11 -0.14 8.70 -39.58 -0.34 -0.48 16 13 C -0.12 -0.14 10.05 -39.58 -0.40 -0.54 16 14 C -0.12 -0.17 10.05 -39.58 -0.40 -0.57 16 15 C -0.12 -0.21 10.05 -39.58 -0.40 -0.60 16 16 C -0.10 -0.19 9.05 -39.58 -0.36 -0.55 16 17 C -0.15 -0.06 6.61 -25.92 -0.17 -0.23 16 18 C 0.07 -0.07 5.57 -25.92 -0.14 -0.21 16 19 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 20 F -0.20 -0.39 17.41 2.25 0.04 -0.35 16 21 C -0.15 0.35 7.20 -25.92 -0.19 0.16 16 22 C 0.03 -0.09 11.61 30.07 0.35 0.26 16 23 O -0.16 0.22 8.89 7.65 0.07 0.28 16 24 H 0.38 -1.01 8.70 45.56 0.40 -0.62 16 25 H 0.14 -0.34 7.96 -51.93 -0.41 -0.76 16 26 H -0.26 -0.14 7.11 56.52 0.40 0.26 16 27 H -0.25 -0.23 7.11 56.52 0.40 0.18 16 28 H 0.16 0.31 8.06 -52.49 -0.42 -0.12 16 29 H 0.40 -2.11 7.70 -40.82 -0.31 -2.43 16 30 H 0.12 -0.03 6.56 -52.49 -0.34 -0.38 16 31 H 0.12 -0.07 8.06 -52.49 -0.42 -0.49 16 32 H 0.12 -0.04 8.06 -52.49 -0.42 -0.46 16 33 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 34 H 0.12 0.12 6.86 -52.49 -0.36 -0.24 16 35 H 0.09 0.19 6.93 -51.93 -0.36 -0.17 16 36 H 0.11 0.05 6.23 -51.93 -0.32 -0.28 16 37 H 0.11 -0.23 7.78 -51.93 -0.40 -0.63 16 38 H 0.09 -0.39 8.11 -51.93 -0.42 -0.81 16 39 H 0.21 -1.60 7.48 -52.49 -0.39 -1.99 16 LS Contribution 337.27 15.07 5.08 5.08 Total: 0.00 -9.24 337.27 -9.02 -18.26 By element: Atomic # 1 Polarization: -5.80 SS G_CDS: -4.25 Total: -10.05 kcal Atomic # 6 Polarization: -0.23 SS G_CDS: -3.94 Total: -4.17 kcal Atomic # 7 Polarization: 1.29 SS G_CDS: -0.20 Total: 1.09 kcal Atomic # 8 Polarization: -2.75 SS G_CDS: -0.30 Total: -3.05 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.35 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.45 Total: -6.81 kcal Total LS contribution 5.08 Total: 5.08 kcal Total: -9.24 -9.02 -18.26 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_13456056.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.891 kcal (2) G-P(sol) polarization free energy of solvation -9.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.127 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.024 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.259 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.150 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds