Wall clock time and date at job start Sat Mar 6 2021 20:40:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86302 * 109.47019 * 2 1 4 4 C 1.50705 * 109.47172 * 119.99458 * 2 1 3 5 5 C 1.31111 * 118.54822 * 250.02591 * 4 2 1 6 6 N 1.38928 * 121.84807 * 179.61585 * 5 4 2 7 7 C 1.47035 * 118.88110 * 13.29062 * 6 5 4 8 8 C 1.53493 * 107.50462 * 316.25498 * 7 6 5 9 9 C 1.50208 * 118.54114 * 70.00175 * 4 2 1 10 10 C 1.50695 * 109.33255 * 320.31055 * 9 4 2 11 11 O 1.21281 * 120.00561 * 239.65598 * 10 9 4 12 12 N 1.34777 * 119.99658 * 59.65690 * 10 9 4 13 13 C 1.46500 * 119.99885 * 184.35865 * 12 10 9 14 14 C 1.50701 * 112.85154 * 58.27957 * 13 12 10 15 15 C 1.38235 * 120.00037 * 265.98073 * 14 13 12 16 16 C 1.38236 * 120.00061 * 179.76818 * 15 14 13 17 17 C 1.38237 * 119.99652 * 0.50076 * 16 15 14 18 18 C 1.38234 * 120.00239 * 359.75003 * 17 16 15 19 19 C 1.38230 * 119.99749 * 359.97438 * 18 17 16 20 20 C 1.53782 * 113.61498 * 287.08111 * 13 12 10 21 21 C 1.54040 * 86.98847 * 270.84088 * 20 13 12 22 22 H 1.08999 * 113.61530 * 89.11251 * 21 20 13 23 23 F 1.39904 * 113.69663 * 220.01271 * 21 20 13 24 24 C 1.53780 * 87.07782 * 334.56536 * 21 20 13 25 25 H 0.96700 * 114.00548 * 300.00494 * 1 2 3 26 26 H 1.08997 * 109.47510 * 239.99942 * 2 1 3 27 27 H 1.48495 * 109.99858 * 299.99483 * 3 2 1 28 28 H 1.48497 * 110.00307 * 61.31480 * 3 2 1 29 29 H 1.08003 * 119.07973 * 359.59129 * 5 4 2 30 30 H 0.96995 * 120.55929 * 193.31582 * 6 5 4 31 31 H 1.09003 * 109.81850 * 75.87808 * 7 6 5 32 32 H 1.09001 * 109.81805 * 196.73222 * 7 6 5 33 33 H 1.08999 * 109.74971 * 301.39602 * 8 7 6 34 34 H 1.08998 * 109.46570 * 180.86345 * 8 7 6 35 35 H 1.08998 * 109.33007 * 79.96846 * 9 4 2 36 36 H 0.96996 * 120.00098 * 4.63120 * 12 10 9 37 37 H 1.08004 * 119.99843 * 359.97438 * 15 14 13 38 38 H 1.08000 * 119.99913 * 180.22696 * 16 15 14 39 39 H 1.08007 * 119.99802 * 179.72410 * 17 16 15 40 40 H 1.08000 * 120.00052 * 179.97438 * 18 17 16 41 41 H 1.08003 * 119.99747 * 179.97438 * 19 18 17 42 42 H 1.09004 * 113.60886 * 25.43488 * 20 13 12 43 43 H 1.09000 * 113.61439 * 156.33487 * 20 13 12 44 44 H 1.08997 * 113.61709 * 270.88457 * 24 21 20 45 45 H 1.09003 * 113.61805 * 139.97457 * 24 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.5111 -0.0026 2.1697 6 7 2.9922 -0.5856 3.3354 7 6 3.1179 -2.0492 3.3980 8 6 1.8442 -2.6485 2.7861 9 6 1.7451 -2.1977 1.3270 10 6 0.3897 -2.5671 0.7817 11 8 -0.4174 -3.1284 1.4920 12 7 0.0743 -2.2738 -0.4954 13 6 -1.2746 -2.5460 -0.9978 14 6 -2.3463 -1.8358 -0.2115 15 6 -2.9804 -2.4824 0.8330 16 6 -3.9601 -1.8294 1.5573 17 6 -4.3130 -0.5333 1.2305 18 6 -3.6826 0.1114 0.1828 19 6 -2.6989 -0.5397 -0.5379 20 6 -1.5602 -4.0410 -1.2175 21 6 -1.0092 -3.8534 -2.6437 22 1 0.0671 -4.0083 -2.7199 23 9 -1.7288 -4.5499 -3.6206 24 6 -1.4114 -2.3743 -2.5199 25 1 -0.3934 0.4417 0.7650 26 1 1.7924 -0.5138 -0.8899 27 1 1.5615 2.4678 -1.2085 28 1 1.5878 2.4587 1.2241 29 1 2.6181 1.0634 2.0332 30 1 3.2406 -0.0363 4.0953 31 1 3.9906 -2.3698 2.8291 32 1 3.2159 -2.3677 4.4358 33 1 0.9711 -2.2992 3.3373 34 1 1.8971 -3.7363 2.8303 35 1 2.5176 -2.6967 0.7419 36 1 0.7416 -1.8861 -1.0829 37 1 -2.7079 -3.4966 1.0852 38 1 -4.4528 -2.3332 2.3756 39 1 -5.0816 -0.0247 1.7936 40 1 -3.9586 1.1238 -0.0728 41 1 -2.2067 -0.0361 -1.3568 42 1 -0.9517 -4.6976 -0.5956 43 1 -2.6205 -4.2918 -1.1885 44 1 -2.4312 -2.1703 -2.8463 45 1 -0.6829 -1.6862 -2.9488 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:40:40 Heat of formation + Delta-G solvation = -14.077461 kcal Electronic energy + Delta-G solvation = -31189.601760 eV Core-core repulsion = 27089.929098 eV Total energy + Delta-G solvation = -4099.672662 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.153 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -48.44429 -41.92371 -40.51008 -39.02192 -38.19553 -37.66130 -34.05601 -33.10225 -32.75678 -31.67068 -31.60794 -27.43547 -27.10443 -26.33685 -25.16292 -23.31201 -22.98962 -22.48281 -21.86873 -20.24033 -19.38556 -19.05931 -18.22861 -17.90815 -17.34838 -17.27378 -16.79179 -16.43175 -16.18984 -15.97865 -15.89927 -15.48533 -15.32950 -15.27312 -15.03324 -14.94913 -14.49777 -14.07351 -13.98311 -13.93782 -13.62052 -13.46094 -13.32926 -13.18147 -13.10451 -12.71843 -12.46276 -12.21588 -12.13201 -11.91155 -11.70169 -11.67658 -11.49674 -11.47603 -11.21328 -10.54783 -10.37581 -9.73260 -9.53928 -9.41429 -8.56546 -4.97502 0.60834 0.75500 1.19528 1.30451 1.53446 1.91901 2.01110 2.32791 2.48627 3.07485 3.20811 3.36416 3.43960 3.52766 3.60717 3.66219 3.74506 3.81057 3.97521 4.17932 4.23735 4.25553 4.31930 4.33283 4.38106 4.47745 4.49536 4.54378 4.61322 4.66739 4.69635 4.74068 4.80532 4.87232 4.89409 4.97789 5.14436 5.19602 5.27430 5.28063 5.35742 5.38179 5.73419 5.78926 5.85421 5.94620 6.19295 6.31238 6.49260 6.71440 6.74239 7.52212 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.516 6.516 2 C -0.054 4.054 3 Si 0.664 3.336 4 C -0.279 4.279 5 C 0.152 3.848 6 N -0.747 5.747 7 C 0.119 3.881 8 C -0.118 4.118 9 C -0.039 4.039 10 C 0.536 3.464 11 O -0.535 6.535 12 N -0.685 5.685 13 C 0.211 3.789 14 C -0.072 4.072 15 C -0.074 4.074 16 C -0.131 4.131 17 C -0.117 4.117 18 C -0.136 4.136 19 C -0.087 4.087 20 C -0.160 4.160 21 C 0.065 3.935 22 H 0.108 0.892 23 F -0.205 7.205 24 C -0.153 4.153 25 H 0.368 0.632 26 H 0.104 0.896 27 H -0.261 1.261 28 H -0.266 1.266 29 H 0.132 0.868 30 H 0.403 0.597 31 H 0.063 0.937 32 H 0.081 0.919 33 H 0.079 0.921 34 H 0.078 0.922 35 H 0.093 0.907 36 H 0.400 0.600 37 H 0.125 0.875 38 H 0.117 0.883 39 H 0.116 0.884 40 H 0.116 0.884 41 H 0.120 0.880 42 H 0.086 0.914 43 H 0.102 0.898 44 H 0.108 0.892 45 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.207 2.365 1.084 6.730 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.322 6.322 2 C -0.165 4.165 3 Si 0.568 3.432 4 C -0.290 4.290 5 C 0.030 3.970 6 N -0.377 5.377 7 C -0.005 4.005 8 C -0.157 4.157 9 C -0.060 4.060 10 C 0.323 3.677 11 O -0.411 6.411 12 N -0.338 5.338 13 C 0.124 3.876 14 C -0.073 4.073 15 C -0.093 4.093 16 C -0.149 4.149 17 C -0.135 4.135 18 C -0.154 4.154 19 C -0.106 4.106 20 C -0.199 4.199 21 C 0.029 3.971 22 H 0.126 0.874 23 F -0.185 7.185 24 C -0.191 4.191 25 H 0.216 0.784 26 H 0.122 0.878 27 H -0.186 1.186 28 H -0.192 1.192 29 H 0.149 0.851 30 H 0.237 0.763 31 H 0.081 0.919 32 H 0.100 0.900 33 H 0.097 0.903 34 H 0.097 0.903 35 H 0.111 0.889 36 H 0.238 0.762 37 H 0.143 0.857 38 H 0.135 0.865 39 H 0.134 0.866 40 H 0.134 0.866 41 H 0.138 0.862 42 H 0.105 0.895 43 H 0.120 0.880 44 H 0.126 0.874 45 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 5.526 2.333 0.994 6.080 hybrid contribution -0.665 0.428 0.559 0.968 sum 4.861 2.761 1.553 5.802 Atomic orbital electron populations 1.86801 1.17146 1.79114 1.49124 1.24605 0.84735 1.09160 0.98013 0.95391 0.92397 0.75709 0.79751 1.20526 1.13074 0.94742 1.00642 1.20511 0.92913 0.96786 0.86773 1.44611 1.71772 1.06526 1.14789 1.21658 0.97348 0.80037 1.01476 1.21689 0.98601 1.01052 0.94339 1.19693 0.94986 0.93721 0.97600 1.20275 0.88898 0.77366 0.81199 1.90681 1.50942 1.41564 1.57898 1.45718 1.11275 1.64400 1.12425 1.19442 0.82657 0.93697 0.91850 1.19417 0.96346 0.94389 0.97139 1.21083 0.94084 1.00433 0.93659 1.21136 0.98419 0.95205 1.00184 1.21150 0.99723 0.95156 0.97484 1.21078 0.97645 0.99915 0.96763 1.20881 0.96361 0.93809 0.99541 1.24071 1.03492 0.97154 0.95182 1.23152 0.96078 0.91653 0.86240 0.87411 1.92822 1.79978 1.80843 1.64903 1.23924 1.04573 0.96293 0.94355 0.78365 0.87783 1.18577 1.19214 0.85076 0.76324 0.91857 0.90033 0.90263 0.90292 0.88942 0.76187 0.85670 0.86490 0.86596 0.86557 0.86182 0.89524 0.87995 0.87390 0.89465 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.52 6.89 -35.23 -0.24 0.27 16 2 C -0.05 0.14 1.75 36.01 0.06 0.20 16 3 Si 0.66 -1.48 29.95 -169.99 -5.09 -6.57 16 4 C -0.28 0.52 5.14 -101.33 -0.52 -0.01 16 5 C 0.15 -0.31 9.62 -16.08 -0.15 -0.47 16 6 N -0.75 1.84 5.83 -60.70 -0.35 1.49 16 7 C 0.12 -0.30 7.16 -3.49 -0.03 -0.32 16 8 C -0.12 0.06 4.89 -26.46 -0.13 -0.07 16 9 C -0.04 0.04 2.74 -93.14 -0.26 -0.22 16 10 C 0.54 0.56 5.97 -10.99 -0.07 0.49 16 11 O -0.53 -2.36 12.64 5.56 0.07 -2.29 16 12 N -0.69 0.50 2.78 -47.92 -0.13 0.37 16 13 C 0.21 0.08 0.69 -132.16 -0.09 -0.01 16 14 C -0.07 -0.14 4.07 -104.62 -0.43 -0.57 16 15 C -0.07 -0.25 7.55 -39.58 -0.30 -0.55 16 16 C -0.13 -0.40 10.05 -39.58 -0.40 -0.80 16 17 C -0.12 -0.27 10.05 -39.58 -0.40 -0.67 16 18 C -0.14 -0.25 10.05 -39.59 -0.40 -0.64 16 19 C -0.09 -0.13 7.48 -39.59 -0.30 -0.43 16 20 C -0.16 -0.18 6.06 -25.78 -0.16 -0.33 16 21 C 0.06 0.02 5.58 -25.78 -0.14 -0.12 16 22 H 0.11 -0.16 8.14 -51.93 -0.42 -0.58 16 23 F -0.20 -0.68 17.41 2.25 0.04 -0.64 16 24 C -0.15 0.09 6.52 -25.92 -0.17 -0.08 16 25 H 0.37 -0.21 8.65 45.56 0.39 0.19 16 26 H 0.10 -0.43 6.41 -51.93 -0.33 -0.76 16 27 H -0.26 -0.39 7.11 56.52 0.40 0.01 16 28 H -0.27 -0.09 6.84 56.52 0.39 0.30 16 29 H 0.13 -0.40 4.30 -52.48 -0.23 -0.62 16 30 H 0.40 -1.58 8.96 -40.82 -0.37 -1.94 16 31 H 0.06 -0.19 8.14 -51.93 -0.42 -0.61 16 32 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 33 H 0.08 0.17 7.76 -51.93 -0.40 -0.24 16 34 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 35 H 0.09 -0.20 8.14 -51.93 -0.42 -0.63 16 36 H 0.40 -0.99 5.86 -40.82 -0.24 -1.23 16 37 H 0.13 0.53 6.66 -52.48 -0.35 0.18 16 38 H 0.12 0.23 8.06 -52.49 -0.42 -0.19 16 39 H 0.12 0.10 8.06 -52.48 -0.42 -0.32 16 40 H 0.12 0.05 8.06 -52.49 -0.42 -0.37 16 41 H 0.12 0.08 7.58 -52.48 -0.40 -0.31 16 42 H 0.09 0.16 7.90 -51.93 -0.41 -0.25 16 43 H 0.10 0.18 7.87 -51.93 -0.41 -0.22 16 44 H 0.11 0.01 8.06 -51.93 -0.42 -0.40 16 45 H 0.09 -0.17 8.09 -51.93 -0.42 -0.59 16 LS Contribution 347.83 15.07 5.24 5.24 Total: 0.00 -5.99 347.83 -10.51 -16.50 By element: Atomic # 1 Polarization: -3.59 SS G_CDS: -6.17 Total: -9.76 kcal Atomic # 6 Polarization: -0.75 SS G_CDS: -3.86 Total: -4.61 kcal Atomic # 7 Polarization: 2.35 SS G_CDS: -0.49 Total: 1.86 kcal Atomic # 8 Polarization: -1.84 SS G_CDS: -0.17 Total: -2.01 kcal Atomic # 9 Polarization: -0.68 SS G_CDS: 0.04 Total: -0.64 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.09 Total: -6.57 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -5.99 -10.51 -16.50 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.421 kcal (2) G-P(sol) polarization free energy of solvation -5.993 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.572 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.506 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.499 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.077 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds