Wall clock time and date at job start Sat Mar 6 2021 20:40:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86302 * 109.47019 * 2 1 4 4 C 1.50705 * 109.47172 * 119.99458 * 2 1 3 5 5 C 1.31111 * 118.54822 * 250.02591 * 4 2 1 6 6 N 1.38928 * 121.84807 * 179.61585 * 5 4 2 7 7 C 1.47035 * 118.88110 * 13.29062 * 6 5 4 8 8 C 1.53493 * 107.50462 * 316.25498 * 7 6 5 9 9 C 1.50208 * 118.54114 * 70.00175 * 4 2 1 10 10 C 1.50695 * 109.33255 * 320.31055 * 9 4 2 11 11 O 1.21281 * 120.00561 * 239.65598 * 10 9 4 12 12 N 1.34777 * 119.99658 * 59.65690 * 10 9 4 13 13 C 1.46500 * 119.99885 * 184.35865 * 12 10 9 14 14 C 1.50701 * 112.85154 * 58.27957 * 13 12 10 15 15 C 1.38235 * 120.00037 * 265.98073 * 14 13 12 16 16 C 1.38236 * 120.00061 * 179.76818 * 15 14 13 17 17 C 1.38237 * 119.99652 * 0.50076 * 16 15 14 18 18 C 1.38234 * 120.00239 * 359.75003 * 17 16 15 19 19 C 1.38230 * 119.99749 * 359.97438 * 18 17 16 20 20 C 1.53782 * 113.61498 * 287.08111 * 13 12 10 21 21 C 1.54040 * 86.98847 * 270.84088 * 20 13 12 22 22 H 1.08999 * 113.61530 * 89.11251 * 21 20 13 23 23 F 1.39904 * 113.69663 * 220.01271 * 21 20 13 24 24 C 1.53780 * 87.07782 * 334.56536 * 21 20 13 25 25 H 0.96700 * 114.00548 * 300.00494 * 1 2 3 26 26 H 1.08997 * 109.47510 * 239.99942 * 2 1 3 27 27 H 1.48495 * 109.99858 * 299.99483 * 3 2 1 28 28 H 1.48497 * 110.00307 * 61.31480 * 3 2 1 29 29 H 1.08003 * 119.07973 * 359.59129 * 5 4 2 30 30 H 0.96995 * 120.55929 * 193.31582 * 6 5 4 31 31 H 1.09003 * 109.81850 * 75.87808 * 7 6 5 32 32 H 1.09001 * 109.81805 * 196.73222 * 7 6 5 33 33 H 1.08999 * 109.74971 * 301.39602 * 8 7 6 34 34 H 1.08998 * 109.46570 * 180.86345 * 8 7 6 35 35 H 1.08998 * 109.33007 * 79.96846 * 9 4 2 36 36 H 0.96996 * 120.00098 * 4.63120 * 12 10 9 37 37 H 1.08004 * 119.99843 * 359.97438 * 15 14 13 38 38 H 1.08000 * 119.99913 * 180.22696 * 16 15 14 39 39 H 1.08007 * 119.99802 * 179.72410 * 17 16 15 40 40 H 1.08000 * 120.00052 * 179.97438 * 18 17 16 41 41 H 1.08003 * 119.99747 * 179.97438 * 19 18 17 42 42 H 1.09004 * 113.60886 * 25.43488 * 20 13 12 43 43 H 1.09000 * 113.61439 * 156.33487 * 20 13 12 44 44 H 1.08997 * 113.61709 * 270.88457 * 24 21 20 45 45 H 1.09003 * 113.61805 * 139.97457 * 24 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.5111 -0.0026 2.1697 6 7 2.9922 -0.5856 3.3354 7 6 3.1179 -2.0492 3.3980 8 6 1.8442 -2.6485 2.7861 9 6 1.7451 -2.1977 1.3270 10 6 0.3897 -2.5671 0.7817 11 8 -0.4174 -3.1284 1.4920 12 7 0.0743 -2.2738 -0.4954 13 6 -1.2746 -2.5460 -0.9978 14 6 -2.3463 -1.8358 -0.2115 15 6 -2.9804 -2.4824 0.8330 16 6 -3.9601 -1.8294 1.5573 17 6 -4.3130 -0.5333 1.2305 18 6 -3.6826 0.1114 0.1828 19 6 -2.6989 -0.5397 -0.5379 20 6 -1.5602 -4.0410 -1.2175 21 6 -1.0092 -3.8534 -2.6437 22 1 0.0671 -4.0083 -2.7199 23 9 -1.7288 -4.5499 -3.6206 24 6 -1.4114 -2.3743 -2.5199 25 1 -0.3934 0.4417 0.7650 26 1 1.7924 -0.5138 -0.8899 27 1 1.5615 2.4678 -1.2085 28 1 1.5878 2.4587 1.2241 29 1 2.6181 1.0634 2.0332 30 1 3.2406 -0.0363 4.0953 31 1 3.9906 -2.3698 2.8291 32 1 3.2159 -2.3677 4.4358 33 1 0.9711 -2.2992 3.3373 34 1 1.8971 -3.7363 2.8303 35 1 2.5176 -2.6967 0.7419 36 1 0.7416 -1.8861 -1.0829 37 1 -2.7079 -3.4966 1.0852 38 1 -4.4528 -2.3332 2.3756 39 1 -5.0816 -0.0247 1.7936 40 1 -3.9586 1.1238 -0.0728 41 1 -2.2067 -0.0361 -1.3568 42 1 -0.9517 -4.6976 -0.5956 43 1 -2.6205 -4.2918 -1.1885 44 1 -2.4312 -2.1703 -2.8463 45 1 -0.6829 -1.6862 -2.9488 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:40:40 Heat of formation + Delta-G solvation = -9.062416 kcal Electronic energy + Delta-G solvation = -31189.384291 eV Core-core repulsion = 27089.929098 eV Total energy + Delta-G solvation = -4099.455193 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.153 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -48.60342 -41.96405 -40.49599 -39.08646 -38.28159 -37.54452 -34.08726 -33.02935 -32.63343 -31.80001 -31.77227 -27.34305 -27.14109 -26.27164 -25.15935 -23.20850 -23.14596 -22.59007 -21.87673 -20.29974 -19.26653 -18.94889 -18.33288 -17.89920 -17.42497 -17.17377 -16.83567 -16.42682 -16.22494 -16.00366 -15.92164 -15.45482 -15.43600 -15.41588 -14.95727 -14.93569 -14.42629 -14.22372 -14.00725 -13.92810 -13.68620 -13.49223 -13.41970 -13.24672 -13.11164 -12.62497 -12.55055 -12.30051 -12.13505 -11.84298 -11.80255 -11.66869 -11.52414 -11.35191 -11.27067 -10.63197 -10.27897 -9.80555 -9.69635 -9.56997 -8.38981 -4.81865 0.45191 0.57101 1.33912 1.46879 1.64649 1.92218 2.07557 2.31298 2.70265 2.94284 3.16258 3.32550 3.48176 3.54941 3.58582 3.74024 3.82594 3.90811 4.03707 4.15261 4.17741 4.23062 4.30663 4.35868 4.39319 4.44827 4.58349 4.64832 4.67554 4.70661 4.72518 4.75463 4.79523 4.85388 4.85976 4.91081 5.12485 5.16294 5.20468 5.27217 5.31986 5.51038 5.61343 5.66721 5.71697 5.78262 6.15280 6.36600 6.58046 6.76968 6.96841 7.50532 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.054 4.054 3 Si 0.741 3.259 4 C -0.283 4.283 5 C 0.150 3.850 6 N -0.748 5.748 7 C 0.123 3.877 8 C -0.116 4.116 9 C -0.035 4.035 10 C 0.533 3.467 11 O -0.573 6.573 12 N -0.671 5.671 13 C 0.213 3.787 14 C -0.072 4.072 15 C -0.090 4.090 16 C -0.147 4.147 17 C -0.126 4.126 18 C -0.140 4.140 19 C -0.086 4.086 20 C -0.164 4.164 21 C 0.065 3.935 22 H 0.132 0.868 23 F -0.222 7.222 24 C -0.143 4.143 25 H 0.366 0.634 26 H 0.128 0.872 27 H -0.309 1.309 28 H -0.302 1.302 29 H 0.141 0.859 30 H 0.410 0.590 31 H 0.076 0.924 32 H 0.091 0.909 33 H 0.047 0.953 34 H 0.074 0.926 35 H 0.112 0.888 36 H 0.412 0.588 37 H 0.108 0.892 38 H 0.119 0.881 39 H 0.129 0.871 40 H 0.133 0.867 41 H 0.134 0.866 42 H 0.075 0.925 43 H 0.087 0.913 44 H 0.102 0.898 45 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.838 3.196 0.238 8.468 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.165 4.165 3 Si 0.651 3.349 4 C -0.294 4.294 5 C 0.027 3.973 6 N -0.378 5.378 7 C -0.002 4.002 8 C -0.155 4.155 9 C -0.057 4.057 10 C 0.320 3.680 11 O -0.452 6.452 12 N -0.324 5.324 13 C 0.125 3.875 14 C -0.074 4.074 15 C -0.109 4.109 16 C -0.165 4.165 17 C -0.144 4.144 18 C -0.158 4.158 19 C -0.104 4.104 20 C -0.203 4.203 21 C 0.029 3.971 22 H 0.149 0.851 23 F -0.203 7.203 24 C -0.181 4.181 25 H 0.213 0.787 26 H 0.146 0.854 27 H -0.238 1.238 28 H -0.231 1.231 29 H 0.157 0.843 30 H 0.245 0.755 31 H 0.094 0.906 32 H 0.109 0.891 33 H 0.066 0.934 34 H 0.092 0.908 35 H 0.130 0.870 36 H 0.252 0.748 37 H 0.126 0.874 38 H 0.137 0.863 39 H 0.147 0.853 40 H 0.151 0.849 41 H 0.151 0.849 42 H 0.094 0.906 43 H 0.106 0.894 44 H 0.120 0.880 45 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 7.192 3.159 0.139 7.857 hybrid contribution -1.215 0.192 0.870 1.507 sum 5.977 3.351 1.009 6.926 Atomic orbital electron populations 1.86787 1.18067 1.79110 1.49034 1.24729 0.83925 1.09061 0.98783 0.94590 0.91172 0.74047 0.75122 1.20476 1.13611 0.94206 1.01139 1.20675 0.92678 0.97192 0.86724 1.44685 1.71496 1.06682 1.14973 1.21671 0.96481 0.79903 1.02119 1.21615 0.98393 1.00842 0.94630 1.19706 0.94114 0.94519 0.97312 1.20689 0.89324 0.76664 0.81288 1.90679 1.52258 1.43333 1.58934 1.45587 1.10992 1.63750 1.12112 1.19382 0.82788 0.92885 0.92430 1.19560 0.96449 0.94661 0.96686 1.21058 0.95000 1.00024 0.94817 1.21283 0.98777 0.95903 1.00571 1.21342 1.00222 0.94897 0.97970 1.21336 0.97398 1.00636 0.96394 1.21016 0.96201 0.93484 0.99688 1.24036 1.02563 0.97680 0.96062 1.23370 0.96962 0.91910 0.84810 0.85076 1.92786 1.80600 1.81372 1.65566 1.23864 1.04958 0.96131 0.93173 0.78660 0.85442 1.23788 1.23077 0.84259 0.75489 0.90633 0.89104 0.93371 0.90777 0.86994 0.74789 0.87372 0.86316 0.85337 0.84946 0.84866 0.90636 0.89411 0.88003 0.87070 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 1.41 6.89 -148.98 -1.03 0.38 16 2 C -0.05 0.35 1.75 71.24 0.12 0.47 16 3 Si 0.74 -3.71 29.95 68.60 2.05 -1.66 16 4 C -0.28 1.32 5.14 -16.75 -0.09 1.23 16 5 C 0.15 -0.75 9.62 83.42 0.80 0.06 16 6 N -0.75 4.26 5.83 -345.96 -2.02 2.24 16 7 C 0.12 -0.70 7.16 86.44 0.62 -0.08 16 8 C -0.12 0.06 4.89 30.77 0.15 0.21 16 9 C -0.04 0.09 2.74 -12.43 -0.03 0.05 16 10 C 0.53 1.29 5.97 87.66 0.52 1.81 16 11 O -0.57 -6.10 12.64 -3.03 -0.04 -6.14 16 12 N -0.67 1.35 2.78 -423.92 -1.18 0.17 16 13 C 0.21 0.20 0.69 3.39 0.00 0.20 16 14 C -0.07 -0.35 4.07 -19.87 -0.08 -0.43 16 15 C -0.09 -0.82 7.55 22.27 0.17 -0.65 16 16 C -0.15 -1.18 10.05 22.27 0.22 -0.96 16 17 C -0.13 -0.69 10.05 22.27 0.22 -0.46 16 18 C -0.14 -0.51 10.05 22.27 0.22 -0.28 16 19 C -0.09 -0.26 7.48 22.27 0.17 -0.09 16 20 C -0.16 -0.56 6.06 31.21 0.19 -0.37 16 21 C 0.07 0.01 5.58 31.21 0.17 0.19 16 22 H 0.13 -0.60 8.14 -2.39 -0.02 -0.62 16 23 F -0.22 -1.50 17.41 44.97 0.78 -0.72 16 24 C -0.14 0.29 6.52 31.12 0.20 0.50 16 25 H 0.37 -0.43 8.65 -74.06 -0.64 -1.07 16 26 H 0.13 -1.40 6.41 -2.39 -0.02 -1.41 16 27 H -0.31 -1.05 7.11 99.48 0.71 -0.34 16 28 H -0.30 -0.28 6.84 99.48 0.68 0.40 16 29 H 0.14 -0.97 4.30 -2.91 -0.01 -0.98 16 30 H 0.41 -3.51 8.96 -92.71 -0.83 -4.34 16 31 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 32 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 33 H 0.05 0.29 7.76 -2.39 -0.02 0.27 16 34 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 35 H 0.11 -0.70 8.14 -2.39 -0.02 -0.72 16 36 H 0.41 -2.83 5.86 -92.71 -0.54 -3.38 16 37 H 0.11 1.29 6.66 -2.91 -0.02 1.27 16 38 H 0.12 0.75 8.06 -2.91 -0.02 0.73 16 39 H 0.13 0.28 8.06 -2.91 -0.02 0.25 16 40 H 0.13 0.01 8.06 -2.91 -0.02 -0.02 16 41 H 0.13 0.03 7.58 -2.91 -0.02 0.01 16 42 H 0.07 0.42 7.90 -2.38 -0.02 0.40 16 43 H 0.09 0.53 7.87 -2.39 -0.02 0.51 16 44 H 0.10 -0.02 8.06 -2.39 -0.02 -0.04 16 45 H 0.11 -0.73 8.09 -2.39 -0.02 -0.75 16 Total: 0.00 -16.70 347.83 1.21 -15.48 By element: Atomic # 1 Polarization: -10.19 SS G_CDS: -0.96 Total: -11.15 kcal Atomic # 6 Polarization: -2.20 SS G_CDS: 3.59 Total: 1.39 kcal Atomic # 7 Polarization: 5.60 SS G_CDS: -3.20 Total: 2.41 kcal Atomic # 8 Polarization: -4.70 SS G_CDS: -1.06 Total: -5.76 kcal Atomic # 9 Polarization: -1.50 SS G_CDS: 0.78 Total: -0.72 kcal Atomic # 14 Polarization: -3.71 SS G_CDS: 2.05 Total: -1.66 kcal Total: -16.70 1.21 -15.48 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.421 kcal (2) G-P(sol) polarization free energy of solvation -16.697 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.213 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.484 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.062 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds