Wall clock time and date at job start Sat Mar 6 2021 20:40:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86298 * 109.46804 * 2 1 4 4 C 1.50694 * 109.47184 * 240.00226 * 2 1 3 5 5 C 1.38239 * 119.97227 * 119.99530 * 4 2 1 6 6 C 1.38297 * 120.11061 * 179.97438 * 5 4 2 7 7 C 1.38122 * 120.05612 * 0.02562 * 6 5 4 8 8 C 1.38756 * 119.94151 * 0.27356 * 7 6 5 9 9 O 1.35900 * 120.04984 * 179.72408 * 8 7 6 10 10 C 1.42894 * 117.00519 * 0.02562 * 9 8 7 11 11 C 1.52995 * 109.47508 * 180.02562 * 10 9 8 12 12 C 1.50694 * 109.47454 * 179.97438 * 11 10 9 13 13 O 1.21287 * 119.99769 * 359.97438 * 12 11 10 14 14 N 1.34779 * 120.00504 * 179.97438 * 12 11 10 15 15 C 1.46496 * 120.00319 * 175.26683 * 14 12 11 16 16 C 1.50698 * 112.84801 * 72.65498 * 15 14 12 17 17 C 1.38239 * 119.99665 * 192.99172 * 16 15 14 18 18 C 1.38234 * 119.99616 * 179.79274 * 17 16 15 19 19 C 1.38240 * 120.00042 * 0.43760 * 18 17 16 20 20 C 1.38240 * 120.00004 * 359.81534 * 19 18 17 21 21 C 1.38232 * 120.00081 * 13.27121 * 16 15 14 22 22 C 1.53782 * 113.61406 * 301.45574 * 15 14 12 23 23 C 1.53779 * 87.08478 * 270.88496 * 22 15 14 24 24 H 1.08997 * 113.61488 * 89.20048 * 23 22 15 25 25 F 1.39899 * 113.61191 * 220.02243 * 23 22 15 26 26 C 1.53781 * 87.07936 * 334.56639 * 23 22 15 27 27 C 1.38171 * 119.97295 * 299.97717 * 4 2 1 28 28 H 0.96704 * 113.99928 * 299.99430 * 1 2 3 29 29 H 1.09002 * 109.47062 * 119.99815 * 2 1 3 30 30 H 1.48502 * 110.00387 * 300.00202 * 3 2 1 31 31 H 1.48507 * 110.00045 * 61.32035 * 3 2 1 32 32 H 1.08002 * 119.94782 * 0.02621 * 5 4 2 33 33 H 1.07995 * 119.96782 * 179.97438 * 6 5 4 34 34 H 1.08001 * 120.02696 * 180.02562 * 7 6 5 35 35 H 1.09009 * 109.47156 * 300.00007 * 10 9 8 36 36 H 1.09002 * 109.47198 * 59.99547 * 10 9 8 37 37 H 1.09008 * 109.46911 * 299.99519 * 11 10 9 38 38 H 1.09002 * 109.47593 * 59.99381 * 11 10 9 39 39 H 0.96999 * 119.99579 * 355.27259 * 14 12 11 40 40 H 1.07995 * 120.00418 * 0.02562 * 17 16 15 41 41 H 1.07998 * 120.00029 * 180.28102 * 18 17 16 42 42 H 1.08001 * 119.99903 * 179.83701 * 19 18 17 43 43 H 1.07995 * 119.99618 * 179.97438 * 20 19 18 44 44 H 1.07997 * 120.00085 * 359.97421 * 21 16 15 45 45 H 1.08999 * 113.61692 * 25.44008 * 22 15 14 46 46 H 1.09006 * 113.60826 * 156.25209 * 22 15 14 47 47 H 1.09000 * 113.61714 * 270.88150 * 26 23 22 48 48 H 1.09000 * 113.61139 * 139.97834 * 26 23 22 49 49 H 1.08002 * 120.02350 * 359.97438 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 2.7260 -0.0379 -2.1400 6 6 3.1890 -0.6871 -3.2699 7 6 2.8579 -2.0095 -3.4925 8 6 2.0553 -2.6848 -2.5841 9 8 1.7235 -3.9842 -2.8038 10 6 2.2366 -4.5932 -3.9903 11 6 1.7600 -6.0451 -4.0655 12 6 2.3005 -6.6871 -5.3171 13 8 2.9979 -6.0463 -6.0747 14 7 2.0091 -7.9734 -5.5946 15 6 2.4470 -8.5672 -6.8602 16 6 3.9311 -8.8251 -6.9030 17 6 4.5459 -9.1263 -8.1039 18 6 5.9080 -9.3588 -8.1438 19 6 6.6538 -9.2989 -6.9814 20 6 6.0380 -9.0028 -5.7796 21 6 4.6766 -8.7663 -5.7405 22 6 1.9131 -7.8338 -8.1020 23 6 0.6899 -8.7629 -8.0280 24 1 -0.1168 -8.3740 -7.4067 25 9 0.2470 -9.2069 -9.2785 26 6 1.5976 -9.7704 -7.3028 27 6 1.5976 -2.0333 -1.4483 28 1 -0.3933 0.4416 0.7651 29 1 1.7924 -0.5138 0.8900 30 1 1.5614 2.4680 -1.2085 31 1 1.5878 2.4586 1.2243 32 1 2.9864 0.9960 -1.9676 33 1 3.8093 -0.1595 -3.9792 34 1 3.2201 -2.5162 -4.3748 35 1 1.8775 -4.0477 -4.8631 36 1 3.3261 -4.5686 -3.9694 37 1 2.1188 -6.5909 -3.1927 38 1 0.6705 -6.0694 -4.0865 39 1 1.5092 -8.5060 -4.9563 40 1 3.9628 -9.1764 -9.0116 41 1 6.3891 -9.5896 -9.0828 42 1 7.7175 -9.4831 -7.0122 43 1 6.6206 -8.9565 -4.8715 44 1 4.1956 -8.5350 -4.8016 45 1 1.6765 -6.7852 -7.9218 46 1 2.5231 -7.9830 -8.9930 47 1 2.1205 -10.4501 -7.9756 48 1 1.1062 -10.2852 -6.4772 49 1 0.9774 -2.5584 -0.7370 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:40:58 Heat of formation + Delta-G solvation = -63.087569 kcal Electronic energy + Delta-G solvation = -32888.352218 eV Core-core repulsion = 28276.845757 eV Total energy + Delta-G solvation = -4611.506461 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -48.60228 -42.07015 -41.19837 -39.96806 -39.04722 -38.54471 -37.39085 -34.54340 -33.21904 -32.53053 -31.92988 -31.73173 -30.73541 -27.29648 -27.08481 -26.33152 -25.05025 -23.59336 -23.54648 -22.61684 -22.07243 -21.48619 -20.44561 -19.17578 -18.66102 -18.52895 -17.96484 -17.44412 -17.42134 -17.26103 -17.14491 -16.81208 -16.62410 -16.06278 -15.86079 -15.79189 -15.67966 -15.63595 -15.29291 -14.75415 -14.49553 -14.41669 -14.36265 -14.25107 -13.94073 -13.91215 -13.80614 -13.67462 -13.45489 -13.31972 -12.97460 -12.91169 -12.62393 -12.33360 -12.32325 -11.96917 -11.94011 -11.81727 -11.77779 -11.62286 -11.53724 -11.01315 -10.55115 -10.36700 -9.83186 -9.81628 -9.62374 -9.17337 -4.95168 0.28652 0.37539 0.48894 0.48914 1.26800 1.41829 1.53877 1.60882 1.96497 2.34807 2.70108 2.71045 3.04451 3.15105 3.33298 3.35668 3.37758 3.50778 3.64487 3.73213 3.77864 3.86394 3.90593 3.99955 4.03212 4.10913 4.11789 4.20938 4.25012 4.26926 4.31308 4.41149 4.45575 4.46186 4.48603 4.54603 4.58535 4.62443 4.65157 4.72834 4.80217 4.93136 5.01678 5.04629 5.10993 5.26590 5.32859 5.45326 5.53594 5.53905 5.61455 5.65868 5.73867 6.05460 6.19495 6.41811 6.43157 6.99393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.077 4.077 3 Si 0.686 3.314 4 C -0.036 4.036 5 C -0.152 4.152 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.317 6.317 10 C 0.075 3.925 11 C -0.142 4.142 12 C 0.522 3.478 13 O -0.518 6.518 14 N -0.713 5.713 15 C 0.196 3.804 16 C -0.073 4.073 17 C -0.112 4.112 18 C -0.116 4.116 19 C -0.119 4.119 20 C -0.118 4.118 21 C -0.101 4.101 22 C -0.154 4.154 23 C 0.066 3.934 24 H 0.111 0.889 25 F -0.202 7.202 26 C -0.151 4.151 27 C -0.124 4.124 28 H 0.380 0.620 29 H 0.079 0.921 30 H -0.255 1.255 31 H -0.261 1.261 32 H 0.129 0.871 33 H 0.132 0.868 34 H 0.133 0.867 35 H 0.072 0.928 36 H 0.073 0.927 37 H 0.108 0.892 38 H 0.108 0.892 39 H 0.407 0.593 40 H 0.123 0.877 41 H 0.124 0.876 42 H 0.123 0.877 43 H 0.122 0.878 44 H 0.116 0.884 45 H 0.092 0.908 46 H 0.108 0.892 47 H 0.113 0.887 48 H 0.090 0.910 49 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.605 -2.239 3.227 4.243 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.187 4.187 3 Si 0.587 3.413 4 C -0.036 4.036 5 C -0.170 4.170 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.182 4.182 12 C 0.308 3.692 13 O -0.393 6.393 14 N -0.367 5.367 15 C 0.109 3.891 16 C -0.075 4.075 17 C -0.130 4.130 18 C -0.134 4.134 19 C -0.137 4.137 20 C -0.136 4.136 21 C -0.120 4.120 22 C -0.193 4.193 23 C 0.030 3.970 24 H 0.128 0.872 25 F -0.183 7.183 26 C -0.189 4.189 27 C -0.143 4.143 28 H 0.228 0.772 29 H 0.097 0.903 30 H -0.179 1.179 31 H -0.187 1.187 32 H 0.146 0.854 33 H 0.150 0.850 34 H 0.150 0.850 35 H 0.091 0.909 36 H 0.092 0.908 37 H 0.126 0.874 38 H 0.127 0.873 39 H 0.243 0.757 40 H 0.141 0.859 41 H 0.142 0.858 42 H 0.141 0.859 43 H 0.140 0.860 44 H 0.134 0.866 45 H 0.111 0.889 46 H 0.126 0.874 47 H 0.131 0.869 48 H 0.109 0.891 49 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 1.835 -1.373 2.198 3.176 hybrid contribution -1.231 -0.462 0.655 1.469 sum 0.604 -1.834 2.853 3.446 Atomic orbital electron populations 1.86597 1.17657 1.80216 1.49762 1.24835 0.84596 1.11099 0.98148 0.94962 0.91759 0.74348 0.80262 1.19009 0.96674 0.93012 0.94934 1.20864 1.01074 0.99826 0.95205 1.20902 0.97938 0.93687 0.96541 1.21378 1.03066 0.96529 1.01119 1.18908 0.94741 0.83183 0.94491 1.85962 1.70987 1.22972 1.43126 1.22395 0.99334 0.91933 0.86417 1.21476 1.03936 0.95568 0.97178 1.20317 0.80114 0.81572 0.87200 1.90790 1.36079 1.62504 1.49877 1.45649 1.58716 1.12264 1.20023 1.19630 0.90594 0.94530 0.84384 1.19564 0.93592 1.00363 0.93958 1.20936 0.94994 1.00028 0.97024 1.21145 0.93865 0.99834 0.98529 1.21216 1.00076 0.99621 0.92747 1.21158 0.94686 0.99593 0.98174 1.20853 0.93980 0.99478 0.97650 1.24037 0.96146 1.00978 0.98118 1.23125 0.95999 0.96142 0.81737 0.87151 1.92835 1.91318 1.90334 1.43782 1.24000 0.96959 0.96427 1.01516 1.20203 1.02861 0.94118 0.97096 0.77184 0.90345 1.17915 1.18655 0.85369 0.85045 0.84965 0.90935 0.90844 0.87411 0.87332 0.75678 0.85873 0.85757 0.85938 0.86031 0.86649 0.88921 0.87372 0.86899 0.89111 0.84975 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.88 12.74 -35.23 -0.45 -1.32 16 2 C -0.08 -0.03 2.81 36.00 0.10 0.07 16 3 Si 0.69 -0.40 29.79 -169.99 -5.06 -5.47 16 4 C -0.04 -0.07 5.42 -104.65 -0.57 -0.64 16 5 C -0.15 -0.18 8.67 -39.56 -0.34 -0.52 16 6 C -0.07 -0.07 10.04 -39.60 -0.40 -0.47 16 7 C -0.20 -0.35 9.04 -39.43 -0.36 -0.71 16 8 C 0.13 0.36 6.69 -39.22 -0.26 0.09 16 9 O -0.32 -0.63 10.14 -19.43 -0.20 -0.83 16 10 C 0.07 0.01 4.03 37.15 0.15 0.16 16 11 C -0.14 0.34 6.07 -27.89 -0.17 0.17 16 12 C 0.52 -0.36 6.51 -10.99 -0.07 -0.43 16 13 O -0.52 -1.66 14.45 5.55 0.08 -1.58 16 14 N -0.71 1.90 4.13 -47.92 -0.20 1.70 16 15 C 0.20 -0.21 0.94 -132.16 -0.12 -0.34 16 16 C -0.07 -0.06 4.86 -104.62 -0.51 -0.57 16 17 C -0.11 -0.09 8.71 -39.58 -0.34 -0.44 16 18 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 19 C -0.12 -0.11 10.05 -39.58 -0.40 -0.50 16 20 C -0.12 -0.12 10.05 -39.58 -0.40 -0.52 16 21 C -0.10 -0.11 9.05 -39.59 -0.36 -0.47 16 22 C -0.15 0.02 6.61 -25.92 -0.17 -0.15 16 23 C 0.07 -0.07 5.58 -25.92 -0.14 -0.22 16 24 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 25 F -0.20 -0.39 17.41 2.25 0.04 -0.35 16 26 C -0.15 0.35 7.20 -25.92 -0.19 0.17 16 27 C -0.12 -0.35 9.55 -39.43 -0.38 -0.73 16 28 H 0.38 -0.95 8.74 45.56 0.40 -0.55 16 29 H 0.08 -0.10 7.96 -51.93 -0.41 -0.52 16 30 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 31 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 32 H 0.13 -0.10 4.87 -52.49 -0.26 -0.35 16 33 H 0.13 -0.16 8.06 -52.49 -0.42 -0.59 16 34 H 0.13 0.08 6.30 -52.49 -0.33 -0.25 16 35 H 0.07 0.04 7.62 -51.92 -0.40 -0.35 16 36 H 0.07 0.03 7.62 -51.93 -0.40 -0.37 16 37 H 0.11 -0.42 8.14 -51.92 -0.42 -0.84 16 38 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 39 H 0.41 -2.27 8.72 -40.82 -0.36 -2.62 16 40 H 0.12 -0.07 6.55 -52.49 -0.34 -0.41 16 41 H 0.12 -0.11 8.06 -52.49 -0.42 -0.54 16 42 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 43 H 0.12 -0.06 8.06 -52.49 -0.42 -0.49 16 44 H 0.12 -0.01 6.86 -52.49 -0.36 -0.37 16 45 H 0.09 0.11 6.94 -51.93 -0.36 -0.25 16 46 H 0.11 0.01 6.23 -51.93 -0.32 -0.32 16 47 H 0.11 -0.22 7.79 -51.93 -0.40 -0.63 16 48 H 0.09 -0.37 8.11 -51.93 -0.42 -0.79 16 49 H 0.13 0.33 8.06 -52.49 -0.42 -0.10 16 LS Contribution 403.81 15.07 6.09 6.09 Total: 0.00 -9.33 403.81 -11.57 -20.90 By element: Atomic # 1 Polarization: -6.05 SS G_CDS: -6.54 Total: -12.59 kcal Atomic # 6 Polarization: -1.22 SS G_CDS: -5.32 Total: -6.55 kcal Atomic # 7 Polarization: 1.90 SS G_CDS: -0.20 Total: 1.70 kcal Atomic # 8 Polarization: -3.17 SS G_CDS: -0.57 Total: -3.73 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.35 kcal Atomic # 14 Polarization: -0.40 SS G_CDS: -5.06 Total: -5.47 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -9.33 -11.57 -20.90 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.187 kcal (2) G-P(sol) polarization free energy of solvation -9.333 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.520 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.568 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.901 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.088 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds