Wall clock time and date at job start Sat Mar 6 2021 20:40:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86298 * 109.46804 * 2 1 4 4 C 1.50694 * 109.47184 * 240.00226 * 2 1 3 5 5 C 1.38239 * 119.97227 * 119.99530 * 4 2 1 6 6 C 1.38297 * 120.11061 * 179.97438 * 5 4 2 7 7 C 1.38122 * 120.05612 * 0.02562 * 6 5 4 8 8 C 1.38756 * 119.94151 * 0.27356 * 7 6 5 9 9 O 1.35900 * 120.04984 * 179.72408 * 8 7 6 10 10 C 1.42894 * 117.00519 * 0.02562 * 9 8 7 11 11 C 1.52995 * 109.47508 * 180.02562 * 10 9 8 12 12 C 1.50694 * 109.47454 * 179.97438 * 11 10 9 13 13 O 1.21287 * 119.99769 * 359.97438 * 12 11 10 14 14 N 1.34779 * 120.00504 * 179.97438 * 12 11 10 15 15 C 1.46496 * 120.00319 * 175.26683 * 14 12 11 16 16 C 1.50698 * 112.84801 * 72.65498 * 15 14 12 17 17 C 1.38239 * 119.99665 * 192.99172 * 16 15 14 18 18 C 1.38234 * 119.99616 * 179.79274 * 17 16 15 19 19 C 1.38240 * 120.00042 * 0.43760 * 18 17 16 20 20 C 1.38240 * 120.00004 * 359.81534 * 19 18 17 21 21 C 1.38232 * 120.00081 * 13.27121 * 16 15 14 22 22 C 1.53782 * 113.61406 * 301.45574 * 15 14 12 23 23 C 1.53779 * 87.08478 * 270.88496 * 22 15 14 24 24 H 1.08997 * 113.61488 * 89.20048 * 23 22 15 25 25 F 1.39899 * 113.61191 * 220.02243 * 23 22 15 26 26 C 1.53781 * 87.07936 * 334.56639 * 23 22 15 27 27 C 1.38171 * 119.97295 * 299.97717 * 4 2 1 28 28 H 0.96704 * 113.99928 * 299.99430 * 1 2 3 29 29 H 1.09002 * 109.47062 * 119.99815 * 2 1 3 30 30 H 1.48502 * 110.00387 * 300.00202 * 3 2 1 31 31 H 1.48507 * 110.00045 * 61.32035 * 3 2 1 32 32 H 1.08002 * 119.94782 * 0.02621 * 5 4 2 33 33 H 1.07995 * 119.96782 * 179.97438 * 6 5 4 34 34 H 1.08001 * 120.02696 * 180.02562 * 7 6 5 35 35 H 1.09009 * 109.47156 * 300.00007 * 10 9 8 36 36 H 1.09002 * 109.47198 * 59.99547 * 10 9 8 37 37 H 1.09008 * 109.46911 * 299.99519 * 11 10 9 38 38 H 1.09002 * 109.47593 * 59.99381 * 11 10 9 39 39 H 0.96999 * 119.99579 * 355.27259 * 14 12 11 40 40 H 1.07995 * 120.00418 * 0.02562 * 17 16 15 41 41 H 1.07998 * 120.00029 * 180.28102 * 18 17 16 42 42 H 1.08001 * 119.99903 * 179.83701 * 19 18 17 43 43 H 1.07995 * 119.99618 * 179.97438 * 20 19 18 44 44 H 1.07997 * 120.00085 * 359.97421 * 21 16 15 45 45 H 1.08999 * 113.61692 * 25.44008 * 22 15 14 46 46 H 1.09006 * 113.60826 * 156.25209 * 22 15 14 47 47 H 1.09000 * 113.61714 * 270.88150 * 26 23 22 48 48 H 1.09000 * 113.61139 * 139.97834 * 26 23 22 49 49 H 1.08002 * 120.02350 * 359.97438 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 2.7260 -0.0379 -2.1400 6 6 3.1890 -0.6871 -3.2699 7 6 2.8579 -2.0095 -3.4925 8 6 2.0553 -2.6848 -2.5841 9 8 1.7235 -3.9842 -2.8038 10 6 2.2366 -4.5932 -3.9903 11 6 1.7600 -6.0451 -4.0655 12 6 2.3005 -6.6871 -5.3171 13 8 2.9979 -6.0463 -6.0747 14 7 2.0091 -7.9734 -5.5946 15 6 2.4470 -8.5672 -6.8602 16 6 3.9311 -8.8251 -6.9030 17 6 4.5459 -9.1263 -8.1039 18 6 5.9080 -9.3588 -8.1438 19 6 6.6538 -9.2989 -6.9814 20 6 6.0380 -9.0028 -5.7796 21 6 4.6766 -8.7663 -5.7405 22 6 1.9131 -7.8338 -8.1020 23 6 0.6899 -8.7629 -8.0280 24 1 -0.1168 -8.3740 -7.4067 25 9 0.2470 -9.2069 -9.2785 26 6 1.5976 -9.7704 -7.3028 27 6 1.5976 -2.0333 -1.4483 28 1 -0.3933 0.4416 0.7651 29 1 1.7924 -0.5138 0.8900 30 1 1.5614 2.4680 -1.2085 31 1 1.5878 2.4586 1.2243 32 1 2.9864 0.9960 -1.9676 33 1 3.8093 -0.1595 -3.9792 34 1 3.2201 -2.5162 -4.3748 35 1 1.8775 -4.0477 -4.8631 36 1 3.3261 -4.5686 -3.9694 37 1 2.1188 -6.5909 -3.1927 38 1 0.6705 -6.0694 -4.0865 39 1 1.5092 -8.5060 -4.9563 40 1 3.9628 -9.1764 -9.0116 41 1 6.3891 -9.5896 -9.0828 42 1 7.7175 -9.4831 -7.0122 43 1 6.6206 -8.9565 -4.8715 44 1 4.1956 -8.5350 -4.8016 45 1 1.6765 -6.7852 -7.9218 46 1 2.5231 -7.9830 -8.9930 47 1 2.1205 -10.4501 -7.9756 48 1 1.1062 -10.2852 -6.4772 49 1 0.9774 -2.5584 -0.7370 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:40:57 Heat of formation + Delta-G solvation = -60.005571 kcal Electronic energy + Delta-G solvation = -32888.218573 eV Core-core repulsion = 28276.845757 eV Total energy + Delta-G solvation = -4611.372816 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -48.64453 -42.02152 -41.27389 -39.97150 -39.09665 -38.52956 -37.45195 -34.49666 -33.17055 -32.61200 -31.92854 -31.74353 -30.79291 -27.23072 -27.09400 -26.31209 -25.02353 -23.67511 -23.56219 -22.60825 -22.08491 -21.45107 -20.38353 -19.21184 -18.64296 -18.57316 -17.93692 -17.44002 -17.36417 -17.27390 -17.20088 -16.82614 -16.60989 -16.07687 -15.88181 -15.82780 -15.70089 -15.67189 -15.30157 -14.73584 -14.56026 -14.45280 -14.37596 -14.23359 -13.98421 -13.94993 -13.83011 -13.55599 -13.49496 -13.33136 -12.95174 -12.91566 -12.59000 -12.36223 -12.31000 -12.03222 -11.96675 -11.82607 -11.73098 -11.69543 -11.46705 -11.01766 -10.57709 -10.29751 -9.91216 -9.86841 -9.63715 -9.28630 -4.91678 0.18118 0.35324 0.37676 0.45209 1.27850 1.48945 1.58936 1.62187 1.95248 2.37424 2.61344 2.71512 3.15196 3.21745 3.35522 3.41186 3.48223 3.57872 3.72941 3.79594 3.83005 3.87623 3.90472 4.04355 4.04969 4.09485 4.16369 4.22232 4.23351 4.24922 4.35172 4.47658 4.49293 4.55930 4.58068 4.61496 4.65060 4.66808 4.70809 4.75973 4.81162 4.96321 4.99662 5.02825 5.12143 5.23222 5.33349 5.36211 5.43920 5.51636 5.58585 5.66242 5.67610 6.04964 6.30860 6.40465 6.57794 7.12955 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.089 4.089 3 Si 0.770 3.230 4 C -0.047 4.047 5 C -0.159 4.159 6 C -0.076 4.076 7 C -0.211 4.211 8 C 0.118 3.882 9 O -0.323 6.323 10 C 0.074 3.926 11 C -0.133 4.133 12 C 0.524 3.476 13 O -0.561 6.561 14 N -0.698 5.698 15 C 0.198 3.802 16 C -0.081 4.081 17 C -0.125 4.125 18 C -0.127 4.127 19 C -0.131 4.131 20 C -0.131 4.131 21 C -0.114 4.114 22 C -0.161 4.161 23 C 0.065 3.935 24 H 0.130 0.870 25 F -0.220 7.220 26 C -0.139 4.139 27 C -0.142 4.142 28 H 0.396 0.604 29 H 0.098 0.902 30 H -0.299 1.299 31 H -0.284 1.284 32 H 0.146 0.854 33 H 0.154 0.846 34 H 0.138 0.862 35 H 0.063 0.937 36 H 0.066 0.934 37 H 0.128 0.872 38 H 0.127 0.873 39 H 0.424 0.576 40 H 0.131 0.869 41 H 0.137 0.863 42 H 0.136 0.864 43 H 0.133 0.867 44 H 0.124 0.876 45 H 0.076 0.924 46 H 0.100 0.900 47 H 0.109 0.891 48 H 0.116 0.884 49 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.436 -2.763 4.215 5.240 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.197 4.197 3 Si 0.675 3.325 4 C -0.048 4.048 5 C -0.177 4.177 6 C -0.093 4.093 7 C -0.230 4.230 8 C 0.073 3.927 9 O -0.237 6.237 10 C -0.001 4.001 11 C -0.172 4.172 12 C 0.311 3.689 13 O -0.439 6.439 14 N -0.352 5.352 15 C 0.110 3.890 16 C -0.083 4.083 17 C -0.143 4.143 18 C -0.145 4.145 19 C -0.149 4.149 20 C -0.149 4.149 21 C -0.132 4.132 22 C -0.199 4.199 23 C 0.029 3.971 24 H 0.147 0.853 25 F -0.201 7.201 26 C -0.177 4.177 27 C -0.161 4.161 28 H 0.246 0.754 29 H 0.115 0.885 30 H -0.227 1.227 31 H -0.211 1.211 32 H 0.163 0.837 33 H 0.171 0.829 34 H 0.156 0.844 35 H 0.081 0.919 36 H 0.084 0.916 37 H 0.147 0.853 38 H 0.146 0.854 39 H 0.263 0.737 40 H 0.148 0.852 41 H 0.155 0.845 42 H 0.154 0.846 43 H 0.151 0.849 44 H 0.142 0.858 45 H 0.095 0.905 46 H 0.119 0.881 47 H 0.128 0.872 48 H 0.135 0.865 49 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 1.650 -1.946 3.223 4.111 hybrid contribution -1.189 -0.263 0.319 1.259 sum 0.461 -2.209 3.542 4.200 Atomic orbital electron populations 1.86550 1.18424 1.80799 1.51082 1.25096 0.84188 1.12186 0.98261 0.94016 0.90371 0.71637 0.76451 1.19302 0.96757 0.92960 0.95745 1.21128 1.00846 1.00628 0.95091 1.21231 0.97742 0.93501 0.96871 1.21540 1.03141 0.97052 1.01263 1.19095 0.95176 0.83615 0.94823 1.85942 1.71178 1.22805 1.43807 1.22438 0.98974 0.93247 0.85485 1.21444 1.04949 0.93872 0.96952 1.20580 0.79361 0.81804 0.87122 1.90780 1.38162 1.63611 1.51343 1.45504 1.58102 1.11802 1.19811 1.19570 0.89906 0.94995 0.84518 1.19792 0.94607 0.99981 0.93884 1.21148 0.95318 1.00260 0.97555 1.21408 0.94102 0.99791 0.99217 1.21464 1.00912 0.99750 0.92813 1.21418 0.95046 0.99624 0.98819 1.21054 0.94241 0.99731 0.98191 1.24029 0.96998 1.00346 0.98528 1.23332 0.96273 0.96292 0.81164 0.85274 1.92798 1.91503 1.90547 1.45236 1.23941 0.96085 0.95760 1.01911 1.20324 1.03564 0.94745 0.97437 0.75362 0.88459 1.22679 1.21092 0.83689 0.82853 0.84428 0.91902 0.91557 0.85348 0.85449 0.73652 0.85152 0.84505 0.84646 0.84867 0.85763 0.90536 0.88144 0.87236 0.86546 0.85289 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.93 12.74 -148.98 -1.90 -3.83 16 2 C -0.09 -0.06 2.81 71.23 0.20 0.14 16 3 Si 0.77 -1.15 29.79 68.60 2.04 0.89 16 4 C -0.05 -0.21 5.42 -19.88 -0.11 -0.32 16 5 C -0.16 -0.39 8.67 22.28 0.19 -0.19 16 6 C -0.08 -0.16 10.04 22.26 0.22 0.06 16 7 C -0.21 -0.92 9.04 22.37 0.20 -0.71 16 8 C 0.12 0.76 6.69 22.51 0.15 0.91 16 9 O -0.32 -1.52 10.14 -92.42 -0.94 -2.46 16 10 C 0.07 0.06 4.03 71.98 0.29 0.35 16 11 C -0.13 0.72 6.07 29.84 0.18 0.90 16 12 C 0.52 -0.74 6.51 87.65 0.57 -0.17 16 13 O -0.56 -4.24 14.45 -3.05 -0.04 -4.28 16 14 N -0.70 4.26 4.13 -423.92 -1.75 2.51 16 15 C 0.20 -0.46 0.94 3.39 0.00 -0.45 16 16 C -0.08 -0.16 4.86 -19.87 -0.10 -0.26 16 17 C -0.12 -0.31 8.71 22.27 0.19 -0.12 16 18 C -0.13 -0.30 10.05 22.27 0.22 -0.07 16 19 C -0.13 -0.31 10.05 22.27 0.22 -0.08 16 20 C -0.13 -0.33 10.05 22.27 0.22 -0.11 16 21 C -0.11 -0.28 9.05 22.27 0.20 -0.08 16 22 C -0.16 -0.10 6.61 31.12 0.21 0.11 16 23 C 0.07 -0.16 5.58 31.12 0.17 0.01 16 24 H 0.13 -0.83 8.14 -2.39 -0.02 -0.85 16 25 F -0.22 -0.89 17.41 44.97 0.78 -0.11 16 26 C -0.14 0.78 7.20 31.12 0.22 1.00 16 27 C -0.14 -0.94 9.55 22.37 0.21 -0.73 16 28 H 0.40 -1.99 8.74 -74.05 -0.65 -2.64 16 29 H 0.10 -0.33 7.96 -2.39 -0.02 -0.35 16 30 H -0.30 -1.77 7.11 99.48 0.71 -1.07 16 31 H -0.28 -0.62 7.11 99.48 0.71 0.09 16 32 H 0.15 -0.28 4.87 -2.91 -0.01 -0.30 16 33 H 0.15 -0.47 8.06 -2.91 -0.02 -0.50 16 34 H 0.14 0.34 6.30 -2.91 -0.02 0.32 16 35 H 0.06 0.16 7.62 -2.38 -0.02 0.14 16 36 H 0.07 0.14 7.62 -2.39 -0.02 0.12 16 37 H 0.13 -1.19 8.14 -2.38 -0.02 -1.21 16 38 H 0.13 -1.14 8.14 -2.39 -0.02 -1.16 16 39 H 0.42 -5.52 8.72 -92.71 -0.81 -6.33 16 40 H 0.13 0.00 6.55 -2.91 -0.02 -0.02 16 41 H 0.14 -0.17 8.06 -2.91 -0.02 -0.20 16 42 H 0.14 -0.18 8.06 -2.91 -0.02 -0.20 16 43 H 0.13 -0.11 8.06 -2.91 -0.02 -0.14 16 44 H 0.12 -0.05 6.86 -2.91 -0.02 -0.07 16 45 H 0.08 0.30 6.94 -2.39 -0.02 0.29 16 46 H 0.10 0.18 6.23 -2.38 -0.01 0.16 16 47 H 0.11 -0.48 7.79 -2.39 -0.02 -0.50 16 48 H 0.12 -1.23 8.11 -2.39 -0.02 -1.25 16 49 H 0.13 0.80 8.06 -2.91 -0.02 0.78 16 Total: 0.00 -23.43 403.81 1.48 -21.95 By element: Atomic # 1 Polarization: -14.45 SS G_CDS: -0.41 Total: -14.87 kcal Atomic # 6 Polarization: -3.50 SS G_CDS: 3.69 Total: 0.19 kcal Atomic # 7 Polarization: 4.26 SS G_CDS: -1.75 Total: 2.51 kcal Atomic # 8 Polarization: -7.69 SS G_CDS: -2.88 Total: -10.57 kcal Atomic # 9 Polarization: -0.89 SS G_CDS: 0.78 Total: -0.11 kcal Atomic # 14 Polarization: -1.15 SS G_CDS: 2.04 Total: 0.89 kcal Total: -23.43 1.48 -21.95 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.058 kcal (2) G-P(sol) polarization free energy of solvation -23.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.483 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.478 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.948 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.006 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds