Wall clock time and date at job start Sat Mar 6 2021 20:41:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86295 * 109.47351 * 2 1 4 4 C 1.50708 * 109.46597 * 240.00019 * 2 1 3 5 5 C 1.38245 * 119.97033 * 120.02632 * 4 2 1 6 6 C 1.38284 * 120.10997 * 179.97438 * 5 4 2 7 7 C 1.38123 * 120.05874 * 359.76906 * 6 5 4 8 8 C 1.38754 * 119.93848 * 0.50202 * 7 6 5 9 9 O 1.35898 * 120.05280 * 179.74490 * 8 7 6 10 10 C 1.42905 * 117.00250 * 359.72922 * 9 8 7 11 11 C 1.52999 * 109.47385 * 179.97438 * 10 9 8 12 12 C 1.52993 * 109.47074 * 180.02562 * 11 10 9 13 13 C 1.50709 * 109.47108 * 180.02562 * 12 11 10 14 14 O 1.21274 * 119.99729 * 0.02562 * 13 12 11 15 15 N 1.34777 * 119.99811 * 179.97438 * 13 12 11 16 16 C 1.46497 * 119.99473 * 185.01659 * 15 13 12 17 17 C 1.50706 * 112.85374 * 294.68894 * 16 15 13 18 18 C 1.38235 * 119.99647 * 313.77640 * 17 16 15 19 19 C 1.38234 * 119.99800 * 179.97438 * 18 17 16 20 20 C 1.38244 * 119.99886 * 359.95201 * 19 18 17 21 21 C 1.38232 * 119.99977 * 0.28311 * 20 19 18 22 22 C 1.38232 * 119.99862 * 133.74797 * 17 16 15 23 23 C 1.53787 * 113.61193 * 163.49698 * 16 15 13 24 24 C 1.53783 * 87.07970 * 270.80049 * 23 16 15 25 25 H 1.08995 * 113.61412 * 89.20275 * 24 23 16 26 26 F 1.39899 * 113.61229 * 220.02187 * 24 23 16 27 27 C 1.53781 * 113.69144 * 65.96205 * 16 15 13 28 28 C 1.38159 * 119.97419 * 299.99689 * 4 2 1 29 29 H 0.96706 * 113.99692 * 299.99951 * 1 2 3 30 30 H 1.09005 * 109.47308 * 120.00610 * 2 1 3 31 31 H 1.48500 * 110.00017 * 300.00085 * 3 2 1 32 32 H 1.48502 * 110.00139 * 61.32170 * 3 2 1 33 33 H 1.08007 * 119.94349 * 359.97359 * 5 4 2 34 34 H 1.08005 * 119.96802 * 180.02562 * 6 5 4 35 35 H 1.07995 * 120.03132 * 180.27903 * 7 6 5 36 36 H 1.09000 * 109.46600 * 60.00162 * 10 9 8 37 37 H 1.08992 * 109.46951 * 300.00077 * 10 9 8 38 38 H 1.08998 * 109.46644 * 59.99900 * 11 10 9 39 39 H 1.09002 * 109.46992 * 300.00469 * 11 10 9 40 40 H 1.08998 * 109.47521 * 60.00370 * 12 11 10 41 41 H 1.09002 * 109.47539 * 300.00067 * 12 11 10 42 42 H 0.96995 * 120.00320 * 5.01995 * 15 13 12 43 43 H 1.07999 * 120.00401 * 359.97438 * 18 17 16 44 44 H 1.08000 * 120.00581 * 179.97438 * 19 18 17 45 45 H 1.07999 * 119.99614 * 179.97438 * 20 19 18 46 46 H 1.08002 * 120.00196 * 179.71443 * 21 20 19 47 47 H 1.07997 * 120.00213 * 0.02562 * 22 17 16 48 48 H 1.09000 * 113.61603 * 25.34941 * 23 16 15 49 49 H 1.08998 * 113.61270 * 156.24925 * 23 16 15 50 50 H 1.08999 * 113.61246 * 203.67104 * 27 16 15 51 51 H 1.08999 * 113.61336 * 334.57684 * 27 16 15 52 52 H 1.08003 * 120.02931 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7105 -1.2306 5 6 2.7264 -0.0382 -2.1400 6 6 3.1892 -0.6875 -3.2698 7 6 2.8619 -2.0111 -3.4900 8 6 2.0593 -2.6864 -2.5816 9 8 1.7316 -3.9873 -2.7986 10 6 2.2434 -4.5960 -3.9860 11 6 1.7729 -6.0501 -4.0572 12 6 2.3214 -6.7018 -5.3281 13 6 1.8574 -8.1340 -5.3986 14 8 1.1567 -8.5883 -4.5193 15 7 2.2205 -8.9094 -6.4395 16 6 1.6813 -10.2657 -6.5654 17 6 2.1320 -11.1801 -5.4554 18 6 3.4624 -11.2092 -5.0811 19 6 3.8757 -12.0474 -4.0627 20 6 2.9583 -12.8559 -3.4177 21 6 1.6288 -12.8304 -3.7952 22 6 1.2148 -11.9892 -4.8111 23 6 1.8542 -10.8695 -7.9692 24 6 0.4952 -10.2415 -8.3208 25 1 0.5709 -9.2258 -8.7088 26 9 -0.3155 -11.0652 -9.1091 27 6 0.1653 -10.3069 -6.8202 28 6 1.5971 -2.0332 -1.4486 29 1 -0.3933 0.4417 0.7651 30 1 1.7924 -0.5139 0.8900 31 1 1.5615 2.4678 -1.2085 32 1 1.5880 2.4585 1.2243 33 1 2.9865 0.9958 -1.9677 34 1 3.8106 -0.1602 -3.9785 35 1 3.2273 -2.5190 -4.3702 36 1 3.3329 -4.5675 -3.9681 37 1 1.8799 -4.0529 -4.8583 38 1 0.6834 -6.0789 -4.0748 39 1 2.1367 -6.5928 -3.1848 40 1 3.4109 -6.6730 -5.3101 41 1 1.9580 -6.1592 -6.2008 42 1 2.8387 -8.5695 -7.1051 43 1 4.1789 -10.5770 -5.5845 44 1 4.9152 -12.0706 -3.7705 45 1 3.2814 -13.5111 -2.6223 46 1 0.9129 -13.4654 -3.2945 47 1 0.1754 -11.9664 -5.1035 48 1 2.6888 -10.4451 -8.5272 49 1 1.8474 -11.9594 -7.9795 50 1 -0.3032 -11.2430 -6.5165 51 1 -0.3635 -9.4283 -6.4507 52 1 0.9759 -2.5580 -0.7379 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_4549616.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:41:00 Heat of formation + Delta-G solvation = -66.985165 kcal Electronic energy + Delta-G solvation = -34392.124461 eV Core-core repulsion = 29624.911368 eV Total energy + Delta-G solvation = -4767.213093 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.173 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -48.63743 -41.88349 -41.24017 -39.94551 -39.13237 -38.56749 -37.48301 -34.89411 -34.16601 -32.58387 -31.97602 -31.83960 -31.21145 -28.44551 -27.25058 -26.85268 -25.76878 -23.78684 -23.61657 -23.34371 -22.57589 -21.78956 -21.43017 -20.36617 -18.94870 -18.59943 -18.54979 -18.14516 -17.46419 -17.41289 -17.25761 -16.99916 -16.92405 -16.55555 -16.25962 -16.02487 -15.83591 -15.67411 -15.59452 -15.41348 -14.97600 -14.67486 -14.53623 -14.41971 -14.22764 -14.03499 -13.90460 -13.72109 -13.58590 -13.50667 -13.42137 -13.23957 -13.09017 -12.68019 -12.61857 -12.39230 -12.24327 -12.21387 -11.96446 -11.91849 -11.71591 -11.66039 -11.59205 -11.40262 -10.94872 -10.58569 -10.22135 -9.88427 -9.86120 -9.64517 -9.23868 -4.92599 0.21766 0.35907 0.41383 0.45870 1.27673 1.61009 1.63491 1.85911 1.94963 2.31576 2.64821 2.76386 3.14649 3.23348 3.35922 3.43363 3.46807 3.61257 3.75968 3.81564 3.85802 3.89135 3.96416 4.00914 4.06863 4.12471 4.14787 4.20247 4.23086 4.27514 4.35324 4.38327 4.42801 4.51580 4.52564 4.57190 4.59651 4.65054 4.66219 4.68927 4.72969 4.81176 4.98907 5.01711 5.02298 5.05191 5.12718 5.17481 5.28426 5.38748 5.41610 5.47430 5.51471 5.58437 5.66249 5.74350 6.05958 6.43503 6.52857 6.55135 7.28092 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.096 4.096 3 Si 0.780 3.220 4 C -0.049 4.049 5 C -0.162 4.162 6 C -0.072 4.072 7 C -0.205 4.205 8 C 0.116 3.884 9 O -0.339 6.339 10 C 0.057 3.943 11 C -0.100 4.100 12 C -0.126 4.126 13 C 0.512 3.488 14 O -0.569 6.569 15 N -0.698 5.698 16 C 0.198 3.802 17 C -0.079 4.079 18 C -0.113 4.113 19 C -0.131 4.131 20 C -0.132 4.132 21 C -0.134 4.134 22 C -0.124 4.124 23 C -0.138 4.138 24 C 0.067 3.933 25 H 0.135 0.865 26 F -0.222 7.222 27 C -0.169 4.169 28 C -0.154 4.154 29 H 0.395 0.605 30 H 0.091 0.909 31 H -0.296 1.296 32 H -0.286 1.286 33 H 0.146 0.854 34 H 0.162 0.838 35 H 0.157 0.843 36 H 0.086 0.914 37 H 0.082 0.918 38 H 0.057 0.943 39 H 0.058 0.942 40 H 0.129 0.871 41 H 0.129 0.871 42 H 0.424 0.576 43 H 0.137 0.863 44 H 0.139 0.861 45 H 0.134 0.866 46 H 0.130 0.870 47 H 0.123 0.877 48 H 0.120 0.880 49 H 0.103 0.897 50 H 0.099 0.901 51 H 0.074 0.926 52 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.998 3.081 -4.366 10.465 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.204 4.204 3 Si 0.684 3.316 4 C -0.049 4.049 5 C -0.180 4.180 6 C -0.089 4.089 7 C -0.224 4.224 8 C 0.071 3.929 9 O -0.254 6.254 10 C -0.017 4.017 11 C -0.139 4.139 12 C -0.166 4.166 13 C 0.300 3.700 14 O -0.446 6.446 15 N -0.353 5.353 16 C 0.110 3.890 17 C -0.080 4.080 18 C -0.131 4.131 19 C -0.148 4.148 20 C -0.150 4.150 21 C -0.151 4.151 22 C -0.142 4.142 23 C -0.176 4.176 24 C 0.031 3.969 25 H 0.152 0.848 26 F -0.202 7.202 27 C -0.207 4.207 28 C -0.173 4.173 29 H 0.245 0.755 30 H 0.109 0.891 31 H -0.223 1.223 32 H -0.213 1.213 33 H 0.163 0.837 34 H 0.180 0.820 35 H 0.174 0.826 36 H 0.104 0.896 37 H 0.100 0.900 38 H 0.076 0.924 39 H 0.077 0.923 40 H 0.147 0.853 41 H 0.147 0.853 42 H 0.263 0.737 43 H 0.155 0.845 44 H 0.156 0.844 45 H 0.152 0.848 46 H 0.148 0.852 47 H 0.140 0.860 48 H 0.138 0.862 49 H 0.122 0.878 50 H 0.117 0.883 51 H 0.093 0.907 52 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 8.236 3.124 -4.217 9.766 hybrid contribution -1.543 -0.479 0.638 1.737 sum 6.692 2.645 -3.579 8.037 Atomic orbital electron populations 1.86555 1.18649 1.80865 1.50974 1.25227 0.84085 1.12747 0.98333 0.93977 0.90117 0.71036 0.76461 1.19290 0.96974 0.92794 0.95831 1.21147 1.00883 1.00678 0.95291 1.21305 0.97488 0.93571 0.96584 1.21608 1.02635 0.96798 1.01348 1.19176 0.95208 0.83643 0.94883 1.86051 1.71722 1.22798 1.44819 1.23011 0.99798 0.93146 0.85759 1.21134 1.01438 0.92898 0.98383 1.21539 1.04762 0.90450 0.99829 1.21158 0.79386 0.88907 0.80571 1.90774 1.39097 1.75606 1.39141 1.45599 1.49201 1.12469 1.28008 1.19546 0.93473 0.82524 0.93459 1.19741 0.93902 0.96976 0.97386 1.21113 0.95294 0.99080 0.97611 1.21445 1.00544 0.96460 0.96392 1.21458 0.93512 0.99725 1.00325 1.21389 0.96810 0.99376 0.97574 1.21262 0.99681 0.96696 0.96573 1.23878 0.98203 1.02789 0.92708 1.23325 0.89904 0.94966 0.88711 0.84779 1.92795 1.75538 1.75066 1.76839 1.24066 0.96830 1.04231 0.95616 1.20318 1.03970 0.95022 0.97974 0.75479 0.89082 1.22299 1.21348 0.83651 0.82029 0.82573 0.89587 0.89970 0.92412 0.92341 0.85283 0.85257 0.73717 0.84526 0.84364 0.84760 0.85156 0.85957 0.86151 0.87841 0.88307 0.90740 0.86702 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.00 12.74 -148.98 -1.90 -4.90 16 2 C -0.10 -0.20 2.81 71.24 0.20 0.00 16 3 Si 0.78 -1.06 29.79 68.60 2.04 0.98 16 4 C -0.05 -0.25 5.42 -19.88 -0.11 -0.36 16 5 C -0.16 -0.19 8.67 22.28 0.19 0.00 16 6 C -0.07 0.09 10.04 22.25 0.22 0.31 16 7 C -0.21 -0.05 9.04 22.37 0.20 0.15 16 8 C 0.12 0.72 6.69 22.51 0.15 0.87 16 9 O -0.34 -2.31 10.14 -92.40 -0.94 -3.25 16 10 C 0.06 -0.14 4.74 71.98 0.34 0.20 16 11 C -0.10 0.05 4.87 30.59 0.15 0.20 16 12 C -0.13 1.03 5.70 29.85 0.17 1.20 16 13 C 0.51 -0.44 7.33 87.66 0.64 0.20 16 14 O -0.57 -5.83 14.77 -3.01 -0.04 -5.87 16 15 N -0.70 4.47 4.84 -423.91 -2.05 2.42 16 16 C 0.20 -0.38 0.82 3.39 0.00 -0.37 16 17 C -0.08 -0.25 4.24 -19.86 -0.08 -0.33 16 18 C -0.11 -0.20 9.46 22.27 0.21 0.02 16 19 C -0.13 -0.33 10.05 22.27 0.22 -0.11 16 20 C -0.13 -0.52 10.05 22.27 0.22 -0.30 16 21 C -0.13 -0.72 10.05 22.27 0.22 -0.50 16 22 C -0.12 -0.74 9.22 22.27 0.21 -0.53 16 23 C -0.14 0.76 7.25 31.12 0.23 0.99 16 24 C 0.07 -0.17 5.58 31.12 0.17 0.00 16 25 H 0.13 -1.02 8.14 -2.39 -0.02 -1.03 16 26 F -0.22 -0.98 17.41 44.97 0.78 -0.20 16 27 C -0.17 -0.18 6.44 31.12 0.20 0.02 16 28 C -0.15 -1.30 9.55 22.36 0.21 -1.09 16 29 H 0.39 -1.25 8.74 -74.05 -0.65 -1.90 16 30 H 0.09 -0.11 7.96 -2.38 -0.02 -0.13 16 31 H -0.30 -1.59 7.11 99.48 0.71 -0.88 16 32 H -0.29 -0.74 7.11 99.48 0.71 -0.04 16 33 H 0.15 -0.47 4.87 -2.91 -0.01 -0.49 16 34 H 0.16 -1.27 8.06 -2.91 -0.02 -1.29 16 35 H 0.16 -0.94 6.30 -2.91 -0.02 -0.95 16 36 H 0.09 -0.59 7.65 -2.39 -0.02 -0.60 16 37 H 0.08 -0.51 7.67 -2.39 -0.02 -0.52 16 38 H 0.06 0.26 8.10 -2.39 -0.02 0.24 16 39 H 0.06 0.26 8.10 -2.39 -0.02 0.24 16 40 H 0.13 -1.78 8.14 -2.39 -0.02 -1.80 16 41 H 0.13 -1.78 8.14 -2.39 -0.02 -1.80 16 42 H 0.42 -6.10 8.66 -92.71 -0.80 -6.90 16 43 H 0.14 -0.44 8.02 -2.91 -0.02 -0.46 16 44 H 0.14 -0.23 8.06 -2.91 -0.02 -0.26 16 45 H 0.13 0.04 8.06 -2.91 -0.02 0.02 16 46 H 0.13 0.32 8.06 -2.91 -0.02 0.30 16 47 H 0.12 0.62 5.71 -2.91 -0.02 0.60 16 48 H 0.12 -1.38 8.09 -2.39 -0.02 -1.40 16 49 H 0.10 -0.34 8.09 -2.39 -0.02 -0.36 16 50 H 0.10 0.28 5.86 -2.39 -0.01 0.26 16 51 H 0.07 0.30 7.56 -2.39 -0.02 0.28 16 52 H 0.11 1.19 8.06 -2.91 -0.02 1.17 16 Total: 0.00 -29.40 428.02 1.43 -27.97 By element: Atomic # 1 Polarization: -17.27 SS G_CDS: -0.45 Total: -17.72 kcal Atomic # 6 Polarization: -3.42 SS G_CDS: 3.98 Total: 0.56 kcal Atomic # 7 Polarization: 4.47 SS G_CDS: -2.05 Total: 2.42 kcal Atomic # 8 Polarization: -11.14 SS G_CDS: -2.88 Total: -14.02 kcal Atomic # 9 Polarization: -0.98 SS G_CDS: 0.78 Total: -0.20 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: 2.04 Total: 0.98 kcal Total: -29.40 1.43 -27.97 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_4549616.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.013 kcal (2) G-P(sol) polarization free energy of solvation -29.402 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.415 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.973 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.985 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds