Wall clock time and date at job start Sat Mar 6 2021 20:41:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86302 * 109.47104 * 2 1 4 4 C 1.50699 * 109.46917 * 119.99807 * 2 1 3 5 5 C 1.38266 * 119.94754 * 65.00477 * 4 2 1 6 6 C 1.38139 * 120.05989 * 179.97438 * 5 4 2 7 7 C 1.38734 * 119.94457 * 359.97438 * 6 5 4 8 8 O 1.35894 * 120.05769 * 180.02562 * 7 6 5 9 9 C 1.42892 * 117.00206 * 180.02562 * 8 7 6 10 10 F 1.39897 * 109.47574 * 59.99505 * 9 8 7 11 11 F 1.39905 * 109.47177 * 299.99525 * 9 8 7 12 12 C 1.50704 * 109.47269 * 179.97438 * 9 8 7 13 13 O 1.21279 * 120.00077 * 359.97438 * 12 9 8 14 14 N 1.34778 * 119.99671 * 179.97438 * 12 9 8 15 15 C 1.46506 * 119.99570 * 185.48463 * 14 12 9 16 16 C 1.50698 * 112.84949 * 56.61315 * 15 14 12 17 17 C 1.38237 * 119.99740 * 215.51841 * 16 15 14 18 18 C 1.38238 * 119.99908 * 179.71882 * 17 16 15 19 19 C 1.38237 * 119.99972 * 0.27984 * 18 17 16 20 20 C 1.38244 * 119.99916 * 359.97438 * 19 18 17 21 21 C 1.38233 * 120.00072 * 359.97438 * 20 19 18 22 22 C 1.53783 * 113.69176 * 285.34018 * 15 14 12 23 23 C 1.53783 * 87.07806 * 270.87108 * 22 15 14 24 24 H 1.09005 * 113.68383 * 89.13311 * 23 22 15 25 25 F 1.39899 * 113.61446 * 220.01400 * 23 22 15 26 26 C 1.53778 * 87.08524 * 334.56813 * 23 22 15 27 27 C 1.38735 * 119.88678 * 0.27106 * 7 6 5 28 28 C 1.38148 * 119.94191 * 359.43313 * 27 7 6 29 29 H 0.96695 * 113.99846 * 59.99927 * 1 2 3 30 30 H 1.08998 * 109.47167 * 239.99880 * 2 1 3 31 31 H 1.48497 * 109.99817 * 59.99902 * 3 2 1 32 32 H 1.48492 * 110.00053 * 181.31881 * 3 2 1 33 33 H 1.08004 * 119.96684 * 359.97353 * 5 4 2 34 34 H 1.07998 * 120.02559 * 180.02562 * 6 5 4 35 35 H 0.96995 * 120.00826 * 5.49004 * 14 12 9 36 36 H 1.07996 * 120.00141 * 0.02562 * 17 16 15 37 37 H 1.07992 * 120.00193 * 180.25347 * 18 17 16 38 38 H 1.07994 * 120.00271 * 179.97438 * 19 18 17 39 39 H 1.07994 * 119.99887 * 179.97438 * 20 19 18 40 40 H 1.07993 * 120.00223 * 179.97438 * 21 20 19 41 41 H 1.08998 * 113.61502 * 25.42494 * 22 15 14 42 42 H 1.09000 * 113.61118 * 156.32505 * 22 15 14 43 43 H 1.08992 * 113.61285 * 270.88211 * 26 23 22 44 44 H 1.09003 * 113.68926 * 139.98774 * 26 23 22 45 45 H 1.07993 * 120.02766 * 179.71875 * 27 7 6 46 46 H 1.08000 * 119.96906 * 180.27075 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6841 -2.0605 1.3973 6 6 2.1439 -2.7141 2.5241 7 6 2.8548 -2.0148 3.4886 8 8 3.3086 -2.6556 4.5977 9 6 4.0325 -1.8725 5.5489 10 9 3.2161 -0.8386 6.0197 11 9 5.1677 -1.3289 4.9380 12 6 4.4522 -2.7458 6.7032 13 8 4.1598 -3.9227 6.7108 14 7 5.1526 -2.2187 7.7270 15 6 5.6641 -3.0886 8.7891 16 6 6.5473 -4.1923 8.2670 17 6 6.5249 -5.4376 8.8667 18 6 7.3309 -6.4518 8.3841 19 6 8.1635 -6.2190 7.3054 20 6 8.1897 -4.9721 6.7090 21 6 7.3830 -3.9582 7.1909 22 6 4.5796 -3.5765 9.7641 23 6 4.8642 -2.3112 10.5904 24 1 4.2640 -1.4507 10.2944 25 9 4.8552 -2.5303 11.9721 26 6 6.2732 -2.3208 9.9742 27 6 3.0971 -0.6590 3.3214 28 6 2.6405 -0.0114 2.1898 29 1 -0.3933 0.4417 -0.7650 30 1 1.7924 -0.5138 -0.8899 31 1 1.5615 2.4678 1.2085 32 1 3.5345 1.7703 -0.0321 33 1 1.1310 -2.6045 0.6459 34 1 1.9508 -3.7687 2.6536 35 1 5.3179 -1.2635 7.7607 36 1 5.8741 -5.6196 9.7091 37 1 7.3104 -7.4258 8.8500 38 1 8.7934 -7.0111 6.9286 39 1 8.8405 -4.7901 5.8666 40 1 7.4038 -2.9841 6.7253 41 1 3.5801 -3.5989 9.3298 42 1 4.8393 -4.5016 10.2787 43 1 6.9958 -2.9026 10.5463 44 1 6.6421 -1.3300 9.7093 45 1 3.6463 -0.1115 4.0729 46 1 2.8327 1.0431 2.0571 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12905100_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:41:27 Heat of formation + Delta-G solvation = -139.893898 kcal Electronic energy + Delta-G solvation = -37578.239833 eV Core-core repulsion = 32180.032467 eV Total energy + Delta-G solvation = -5398.207366 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.122 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -51.03724 -49.00801 -48.67168 -42.23804 -41.49465 -40.20729 -39.31011 -38.73085 -37.31115 -34.87013 -32.65339 -32.26574 -32.06411 -31.88841 -29.26671 -27.33067 -26.53949 -25.83709 -24.69222 -23.62004 -23.12868 -22.61919 -22.37306 -20.89294 -20.64929 -19.92557 -19.83594 -18.65877 -18.40113 -18.18822 -17.51525 -17.32662 -17.12435 -16.84718 -16.60405 -16.50378 -16.41981 -16.14791 -15.85253 -15.78186 -15.68372 -15.52240 -15.43726 -15.31441 -15.25397 -14.93989 -14.56067 -14.50137 -14.44353 -14.14298 -14.03363 -13.90596 -13.74972 -13.60583 -13.48929 -13.27217 -12.83417 -12.60497 -12.31909 -12.22560 -12.05260 -12.00634 -11.83227 -11.71331 -11.50332 -10.73116 -10.37529 -10.32516 -9.93034 -9.74802 -9.71623 -4.97009 -0.13970 -0.03045 0.16191 0.37535 0.39316 0.52303 1.27746 1.52207 1.62049 1.82803 1.94316 2.28238 2.54643 2.68006 2.99829 3.09233 3.10555 3.25991 3.28893 3.36052 3.39903 3.49625 3.71869 3.81691 3.83903 3.91940 3.97578 4.05746 4.06873 4.16415 4.22658 4.38723 4.42420 4.44344 4.50461 4.53626 4.60493 4.65603 4.72878 4.75359 4.78423 4.85981 4.94037 5.03586 5.15176 5.18894 5.23323 5.44352 5.47979 5.53433 5.65880 5.70737 5.98413 6.32559 6.91024 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.074 4.074 3 Si 0.770 3.230 4 C -0.109 4.109 5 C -0.053 4.053 6 C -0.130 4.130 7 C 0.087 3.913 8 O -0.301 6.301 9 C 0.433 3.567 10 F -0.173 7.173 11 F -0.171 7.171 12 C 0.522 3.478 13 O -0.482 6.482 14 N -0.671 5.671 15 C 0.193 3.807 16 C -0.086 4.086 17 C -0.117 4.117 18 C -0.125 4.125 19 C -0.126 4.126 20 C -0.130 4.130 21 C -0.121 4.121 22 C -0.168 4.168 23 C 0.066 3.934 24 H 0.132 0.868 25 F -0.216 7.216 26 C -0.135 4.135 27 C -0.193 4.193 28 C -0.100 4.100 29 H 0.405 0.595 30 H 0.102 0.898 31 H -0.297 1.297 32 H -0.288 1.288 33 H 0.163 0.837 34 H 0.154 0.846 35 H 0.428 0.572 36 H 0.137 0.863 37 H 0.140 0.860 38 H 0.138 0.862 39 H 0.134 0.866 40 H 0.123 0.877 41 H 0.080 0.920 42 H 0.116 0.884 43 H 0.119 0.881 44 H 0.119 0.881 45 H 0.139 0.861 46 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.555 3.494 -3.546 5.216 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.184 4.184 3 Si 0.677 3.323 4 C -0.109 4.109 5 C -0.071 4.071 6 C -0.149 4.149 7 C 0.044 3.956 8 O -0.217 6.217 9 C 0.355 3.645 10 F -0.154 7.154 11 F -0.153 7.153 12 C 0.300 3.700 13 O -0.353 6.353 14 N -0.327 5.327 15 C 0.108 3.892 16 C -0.087 4.087 17 C -0.135 4.135 18 C -0.143 4.143 19 C -0.144 4.144 20 C -0.148 4.148 21 C -0.139 4.139 22 C -0.206 4.206 23 C 0.031 3.969 24 H 0.149 0.851 25 F -0.196 7.196 26 C -0.173 4.173 27 C -0.212 4.212 28 C -0.117 4.117 29 H 0.257 0.743 30 H 0.119 0.881 31 H -0.225 1.225 32 H -0.216 1.216 33 H 0.181 0.819 34 H 0.172 0.828 35 H 0.268 0.732 36 H 0.155 0.845 37 H 0.158 0.842 38 H 0.156 0.844 39 H 0.152 0.848 40 H 0.141 0.859 41 H 0.099 0.901 42 H 0.134 0.866 43 H 0.137 0.863 44 H 0.137 0.863 45 H 0.157 0.843 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 1.899 2.767 -2.508 4.190 hybrid contribution 0.245 0.249 0.296 0.458 sum 2.145 3.016 -2.212 4.312 Atomic orbital electron populations 1.86442 1.16928 1.82407 1.51526 1.24737 0.86089 1.10731 0.96845 0.94386 0.77421 0.75732 0.84795 1.19798 0.99582 0.94941 0.96588 1.21173 0.96065 0.93404 0.96481 1.20820 0.99366 1.01839 0.92834 1.19173 0.97704 0.91822 0.86863 1.86641 1.68270 1.37018 1.29816 1.21863 0.76493 0.79553 0.86600 1.93195 1.73235 1.60532 1.88433 1.93195 1.51337 1.86520 1.84225 1.19276 0.80542 0.87525 0.82643 1.90885 1.52016 1.15564 1.76820 1.45398 1.53365 1.12574 1.21343 1.19834 0.94076 0.90115 0.85212 1.19575 0.97369 0.94538 0.97186 1.21283 0.99264 0.92243 1.00720 1.21451 0.96100 0.99841 0.96900 1.21506 0.99155 0.97548 0.96217 1.21404 0.99447 0.93531 1.00370 1.21063 0.96588 0.99760 0.96491 1.24209 1.00011 0.99917 0.96467 1.23299 0.99142 0.99716 0.74791 0.85079 1.92813 1.97448 1.96051 1.33316 1.23970 0.97101 1.03354 0.92886 1.21503 1.05464 0.93277 1.00939 1.20859 0.98162 0.99293 0.93422 0.74346 0.88051 1.22492 1.21576 0.81940 0.82817 0.73248 0.84495 0.84172 0.84391 0.84775 0.85913 0.90125 0.86563 0.86307 0.86279 0.84342 0.85527 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.77 12.81 -148.98 -1.91 -1.13 16 2 C -0.07 0.11 2.79 71.24 0.20 0.31 16 3 Si 0.77 -1.85 29.84 68.60 2.05 0.20 16 4 C -0.11 -0.52 5.39 -19.85 -0.11 -0.63 16 5 C -0.05 -0.20 9.68 22.25 0.22 0.02 16 6 C -0.13 -0.77 9.99 22.36 0.22 -0.54 16 7 C 0.09 0.78 6.48 22.51 0.15 0.92 16 8 O -0.30 -3.02 9.60 -73.33 -0.70 -3.73 16 9 C 0.43 2.35 2.05 71.24 0.15 2.49 16 10 F -0.17 -0.69 15.28 44.97 0.69 0.00 16 11 F -0.17 -0.68 15.31 44.97 0.69 0.01 16 12 C 0.52 2.44 6.62 87.66 0.58 3.02 16 13 O -0.48 -5.59 15.48 16.01 0.25 -5.34 16 14 N -0.67 1.70 4.59 -423.90 -1.94 -0.24 16 15 C 0.19 -0.37 0.88 3.38 0.00 -0.37 16 16 C -0.09 -0.20 4.07 -19.86 -0.08 -0.28 16 17 C -0.12 -0.30 9.27 22.27 0.21 -0.09 16 18 C -0.13 -0.29 10.05 22.27 0.22 -0.07 16 19 C -0.13 -0.32 10.05 22.27 0.22 -0.09 16 20 C -0.13 -0.40 10.05 22.27 0.22 -0.18 16 21 C -0.12 -0.38 9.02 22.27 0.20 -0.18 16 22 C -0.17 0.18 6.72 31.12 0.21 0.39 16 23 C 0.07 -0.25 5.58 31.12 0.17 -0.07 16 24 H 0.13 -0.99 8.14 -2.38 -0.02 -1.01 16 25 F -0.22 -0.55 17.41 44.97 0.78 0.23 16 26 C -0.14 0.85 7.23 31.12 0.23 1.08 16 27 C -0.19 -1.53 8.26 22.37 0.18 -1.35 16 28 C -0.10 -0.69 8.66 22.26 0.19 -0.50 16 29 H 0.41 -4.86 8.74 -74.06 -0.65 -5.51 16 30 H 0.10 -0.63 7.96 -2.39 -0.02 -0.65 16 31 H -0.30 -1.56 7.05 99.48 0.70 -0.86 16 32 H -0.29 -0.91 7.11 99.48 0.71 -0.20 16 33 H 0.16 -0.20 8.06 -2.91 -0.02 -0.22 16 34 H 0.15 0.43 8.06 -2.91 -0.02 0.40 16 35 H 0.43 -3.79 8.63 -92.71 -0.80 -4.59 16 36 H 0.14 -0.06 5.67 -2.91 -0.02 -0.08 16 37 H 0.14 -0.21 8.06 -2.91 -0.02 -0.24 16 38 H 0.14 -0.18 8.06 -2.91 -0.02 -0.20 16 39 H 0.13 -0.02 8.06 -2.91 -0.02 -0.04 16 40 H 0.12 0.10 7.73 -2.91 -0.02 0.08 16 41 H 0.08 0.12 8.07 -2.39 -0.02 0.10 16 42 H 0.12 -0.16 5.66 -2.39 -0.01 -0.18 16 43 H 0.12 -0.67 8.09 -2.39 -0.02 -0.69 16 44 H 0.12 -1.33 8.10 -2.39 -0.02 -1.34 16 45 H 0.14 0.82 5.10 -2.91 -0.01 0.81 16 46 H 0.13 0.70 4.86 -2.91 -0.01 0.69 16 Total: 0.00 -22.81 394.33 2.95 -19.86 By element: Atomic # 1 Polarization: -13.40 SS G_CDS: -0.33 Total: -13.73 kcal Atomic # 6 Polarization: 0.49 SS G_CDS: 3.39 Total: 3.88 kcal Atomic # 7 Polarization: 1.70 SS G_CDS: -1.94 Total: -0.24 kcal Atomic # 8 Polarization: -7.84 SS G_CDS: -2.36 Total: -10.20 kcal Atomic # 9 Polarization: -1.92 SS G_CDS: 2.16 Total: 0.24 kcal Atomic # 14 Polarization: -1.85 SS G_CDS: 2.05 Total: 0.20 kcal Total: -22.81 2.95 -19.86 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.030 kcal (2) G-P(sol) polarization free energy of solvation -22.814 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.844 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.950 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.864 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.894 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds