Wall clock time and date at job start Sat Mar 6 2021 20:41:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86303 * 109.47090 * 2 1 4 4 C 1.50697 * 109.47384 * 119.99843 * 2 1 3 5 5 C 1.38246 * 119.94138 * 65.00485 * 4 2 1 6 6 C 1.38236 * 120.05008 * 179.97438 * 5 4 2 7 7 Br 1.89100 * 120.03774 * 180.02562 * 6 5 4 8 8 C 1.38795 * 119.92525 * 0.02562 * 6 5 4 9 9 O 1.35916 * 120.05697 * 180.02562 * 8 6 5 10 10 C 1.42900 * 116.99567 * 180.02562 * 9 8 6 11 11 C 1.50702 * 109.46898 * 179.97438 * 10 9 8 12 12 O 1.21282 * 119.99799 * 0.02562 * 11 10 9 13 13 N 1.34777 * 120.00436 * 179.97438 * 11 10 9 14 14 C 1.46496 * 120.00244 * 174.90463 * 13 11 10 15 15 C 1.50704 * 112.85177 * 295.31303 * 14 13 11 16 16 C 1.38235 * 120.00316 * 163.97894 * 15 14 13 17 17 C 1.38233 * 120.00003 * 179.78970 * 16 15 14 18 18 C 1.38243 * 119.99783 * 0.43769 * 17 16 15 19 19 C 1.38228 * 120.00155 * 359.81505 * 18 17 16 20 20 C 1.38236 * 119.99535 * 344.24929 * 15 14 13 21 21 C 1.53778 * 113.61416 * 164.11737 * 14 13 11 22 22 C 1.53774 * 87.08188 * 270.88538 * 21 14 13 23 23 H 1.08998 * 113.61980 * 89.20190 * 22 21 14 24 24 F 1.39905 * 113.61233 * 220.02032 * 22 21 14 25 25 C 1.53777 * 113.61753 * 66.51026 * 14 13 11 26 26 C 1.38724 * 119.87990 * 0.28266 * 8 6 5 27 27 C 1.38137 * 119.95442 * 359.44752 * 26 8 6 28 28 H 0.96698 * 113.99380 * 299.99443 * 1 2 3 29 29 H 1.09006 * 109.47199 * 240.00344 * 2 1 3 30 30 H 1.48498 * 110.00259 * 178.67982 * 3 2 1 31 31 H 1.48505 * 109.99948 * 300.00235 * 3 2 1 32 32 H 1.08005 * 119.97416 * 359.97438 * 5 4 2 33 33 H 1.08999 * 109.47346 * 299.99483 * 10 9 8 34 34 H 1.09000 * 109.47309 * 60.00302 * 10 9 8 35 35 H 0.97001 * 119.99292 * 354.90812 * 13 11 10 36 36 H 1.07994 * 119.99652 * 359.97438 * 16 15 14 37 37 H 1.08000 * 119.99865 * 180.27435 * 17 16 15 38 38 H 1.08004 * 119.99286 * 179.83484 * 18 17 16 39 39 H 1.08001 * 120.00092 * 180.02562 * 19 18 17 40 40 H 1.08002 * 120.00902 * 359.97438 * 20 15 14 41 41 H 1.09007 * 113.61528 * 25.43325 * 21 14 13 42 42 H 1.09001 * 113.61638 * 156.24874 * 21 14 13 43 43 H 1.08991 * 113.61868 * 203.66611 * 25 14 13 44 44 H 1.09004 * 113.60846 * 334.56728 * 25 14 13 45 45 H 1.07997 * 120.01864 * 179.70011 * 26 8 6 46 46 H 1.07996 * 119.96479 * 180.25686 * 27 26 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2304 5 6 1.6842 -2.0603 1.3971 6 6 2.1445 -2.7142 2.5247 7 35 1.8068 -4.5609 2.7520 8 6 2.8547 -2.0139 3.4898 9 8 3.3090 -2.6543 4.5992 10 6 4.0318 -1.8704 5.5505 11 6 4.4521 -2.7431 6.7049 12 8 4.1617 -3.9206 6.7120 13 7 5.1517 -2.2155 7.7290 14 6 5.4639 -3.0353 8.9022 15 6 4.2348 -3.4552 9.6666 16 6 4.3108 -4.4843 10.5864 17 6 3.1844 -4.8665 11.2906 18 6 1.9799 -4.2255 11.0685 19 6 1.9027 -3.1999 10.1450 20 6 3.0301 -2.8148 9.4439 21 6 6.5696 -2.4424 9.7914 22 6 7.5750 -3.2128 8.9194 23 1 7.9211 -2.6508 8.0519 24 9 8.6223 -3.7882 9.6470 25 6 6.4300 -4.1941 8.6047 26 6 3.0955 -0.6580 3.3226 27 6 2.6382 -0.0106 2.1912 28 1 -0.3932 0.4416 0.7651 29 1 1.7924 -0.5138 -0.8901 30 1 3.5346 1.7704 0.0321 31 1 1.5614 2.4679 -1.2085 32 1 1.1311 -2.6044 0.6458 33 1 4.9160 -1.4460 5.0748 34 1 3.3948 -1.0655 5.9172 35 1 5.4484 -1.2928 7.6890 36 1 5.2509 -4.9877 10.7569 37 1 3.2448 -5.6676 12.0124 38 1 1.0992 -4.5260 11.6169 39 1 0.9617 -2.6989 9.9718 40 1 2.9697 -2.0134 8.7224 41 1 6.6613 -1.3593 9.7104 42 1 6.5312 -2.7877 10.8246 43 1 6.3543 -5.0186 9.3136 44 1 6.4090 -4.5242 7.5661 45 1 3.6438 -0.1099 4.0744 46 1 2.8291 1.0440 2.0589 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12905100_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:41:55 Heat of formation + Delta-G solvation = -47.589983 kcal Electronic energy + Delta-G solvation = -33551.468462 eV Core-core repulsion = 28756.353643 eV Total energy + Delta-G solvation = -4795.114820 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 436.052 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -48.61231 -42.16486 -41.51418 -40.00391 -39.17844 -38.46262 -37.27806 -34.57684 -33.62143 -32.10763 -31.94172 -31.75804 -30.52555 -29.69960 -27.28068 -26.54049 -25.86219 -24.18349 -23.56462 -22.72131 -22.46847 -21.95846 -20.51114 -19.67909 -18.70228 -18.61165 -18.24983 -17.61380 -17.41590 -17.17036 -17.00492 -16.68023 -16.50868 -16.06015 -16.02775 -15.78296 -15.70358 -15.57643 -15.30827 -14.99706 -14.84267 -14.43596 -14.38173 -14.18955 -13.92992 -13.92678 -13.84083 -13.75937 -13.68578 -13.35464 -12.69040 -12.42576 -12.36012 -12.31982 -12.20866 -11.98006 -11.95748 -11.82728 -11.78493 -11.54548 -11.08630 -10.97539 -10.52887 -10.41323 -10.02217 -9.82789 -9.62581 -9.37838 -5.15899 -0.13672 0.02270 0.37309 0.49157 0.68911 1.14733 1.19460 1.35194 1.51981 1.88412 2.25173 2.29485 2.70566 3.01257 3.12853 3.20973 3.33699 3.33954 3.44294 3.50930 3.52841 3.59822 3.63644 3.70927 3.72863 3.95389 3.98329 4.01694 4.10112 4.20566 4.23931 4.38474 4.40549 4.44183 4.45797 4.51274 4.58321 4.62375 4.72113 4.81381 4.85992 4.90586 5.01086 5.10720 5.12546 5.22715 5.35398 5.53333 5.61702 5.63897 5.89771 6.05337 6.15173 6.48570 6.95489 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.064 4.064 3 Si 0.686 3.314 4 C -0.152 4.152 5 C -0.024 4.024 6 C -0.123 4.123 7 Br -0.024 7.024 8 C 0.160 3.840 9 O -0.273 6.273 10 C 0.037 3.963 11 C 0.516 3.484 12 O -0.485 6.485 13 N -0.713 5.713 14 C 0.200 3.800 15 C -0.074 4.074 16 C -0.110 4.110 17 C -0.115 4.115 18 C -0.118 4.118 19 C -0.117 4.117 20 C -0.102 4.102 21 C -0.150 4.150 22 C 0.066 3.934 23 H 0.111 0.889 24 F -0.202 7.202 25 C -0.157 4.157 26 C -0.201 4.201 27 C -0.059 4.059 28 H 0.380 0.620 29 H 0.116 0.884 30 H -0.256 1.256 31 H -0.253 1.253 32 H 0.144 0.856 33 H 0.097 0.903 34 H 0.098 0.902 35 H 0.406 0.594 36 H 0.124 0.876 37 H 0.125 0.875 38 H 0.123 0.877 39 H 0.122 0.878 40 H 0.114 0.886 41 H 0.091 0.909 42 H 0.114 0.886 43 H 0.109 0.891 44 H 0.093 0.907 45 H 0.141 0.859 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.715 7.899 2.907 8.447 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.175 4.175 3 Si 0.588 3.412 4 C -0.153 4.153 5 C -0.044 4.044 6 C -0.203 4.203 7 Br 0.062 6.938 8 C 0.112 3.888 9 O -0.184 6.184 10 C -0.042 4.042 11 C 0.300 3.700 12 O -0.356 6.356 13 N -0.369 5.369 14 C 0.113 3.887 15 C -0.076 4.076 16 C -0.128 4.128 17 C -0.133 4.133 18 C -0.136 4.136 19 C -0.135 4.135 20 C -0.120 4.120 21 C -0.188 4.188 22 C 0.030 3.970 23 H 0.128 0.872 24 F -0.182 7.182 25 C -0.195 4.195 26 C -0.220 4.220 27 C -0.077 4.077 28 H 0.227 0.773 29 H 0.133 0.867 30 H -0.181 1.181 31 H -0.177 1.177 32 H 0.162 0.838 33 H 0.115 0.885 34 H 0.116 0.884 35 H 0.242 0.758 36 H 0.142 0.858 37 H 0.143 0.857 38 H 0.141 0.859 39 H 0.140 0.860 40 H 0.132 0.868 41 H 0.109 0.891 42 H 0.132 0.868 43 H 0.127 0.873 44 H 0.111 0.889 45 H 0.159 0.841 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.933 6.381 2.070 6.773 hybrid contribution 0.398 0.468 -0.194 0.644 sum 1.331 6.849 1.877 7.226 Atomic orbital electron populations 1.86530 1.16917 1.81679 1.49237 1.25019 0.85391 1.09992 0.97067 0.94912 0.80930 0.77740 0.87625 1.20275 1.02459 0.94396 0.98202 1.20895 0.95182 0.93613 0.94668 1.21170 1.07836 0.93205 0.98071 1.96823 1.94715 1.04712 1.97592 1.18627 0.93093 0.90685 0.86398 1.86292 1.67972 1.35953 1.28175 1.22543 0.98014 0.94090 0.89552 1.19942 0.78577 0.88683 0.82798 1.90846 1.51872 1.15490 1.77374 1.45487 1.57969 1.15844 1.17569 1.19604 0.91457 0.92655 0.84987 1.19510 0.93899 0.96997 0.97156 1.20938 0.99027 0.96488 0.96372 1.21151 0.92728 0.99842 0.99590 1.21219 0.97952 0.96207 0.98178 1.21147 0.98327 0.97531 0.96472 1.20825 0.92288 0.99726 0.99184 1.23998 0.92640 1.01766 1.00383 1.23180 0.83624 0.95662 0.94543 0.87161 1.92838 1.60318 1.85873 1.79201 1.24129 0.92677 0.97463 1.05257 1.21160 1.06971 0.92811 1.01061 1.20908 0.95015 0.99350 0.92439 0.77308 0.86710 1.18124 1.17734 0.83835 0.88477 0.88371 0.75842 0.85795 0.85715 0.85900 0.86001 0.86812 0.89086 0.86775 0.87316 0.88869 0.84138 0.84605 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.34 12.83 -35.23 -0.45 -0.11 16 2 C -0.06 0.08 2.80 36.00 0.10 0.18 16 3 Si 0.69 -1.63 29.80 -169.99 -5.07 -6.69 16 4 C -0.15 0.13 5.35 -104.60 -0.56 -0.43 16 5 C -0.02 -0.02 9.42 -39.58 -0.37 -0.39 16 6 C -0.12 -0.24 6.24 -39.38 -0.25 -0.49 16 7 Br -0.02 -0.08 33.16 -68.01 -2.26 -2.34 16 8 C 0.16 0.12 6.68 -39.20 -0.26 -0.14 16 9 O -0.27 -0.42 9.01 -39.39 -0.35 -0.78 16 10 C 0.04 -0.10 5.22 36.01 0.19 0.09 16 11 C 0.52 -0.15 6.29 -10.98 -0.07 -0.22 16 12 O -0.49 -2.31 14.99 -14.36 -0.22 -2.52 16 13 N -0.71 2.23 4.33 -47.93 -0.21 2.03 16 14 C 0.20 -0.27 0.93 -132.16 -0.12 -0.39 16 15 C -0.07 -0.06 4.69 -104.62 -0.49 -0.55 16 16 C -0.11 -0.10 8.86 -39.58 -0.35 -0.45 16 17 C -0.12 -0.11 10.05 -39.58 -0.40 -0.51 16 18 C -0.12 -0.12 10.05 -39.58 -0.40 -0.52 16 19 C -0.12 -0.13 10.05 -39.58 -0.40 -0.53 16 20 C -0.10 -0.10 8.81 -39.58 -0.35 -0.45 16 21 C -0.15 0.43 7.19 -25.92 -0.19 0.24 16 22 C 0.07 -0.10 5.58 -25.78 -0.14 -0.24 16 23 H 0.11 -0.36 8.14 -51.93 -0.42 -0.79 16 24 F -0.20 -0.32 17.41 2.25 0.04 -0.28 16 25 C -0.16 0.03 6.68 -25.78 -0.17 -0.14 16 26 C -0.20 0.42 9.04 -39.44 -0.36 0.06 16 27 C -0.06 0.14 8.66 -39.60 -0.34 -0.21 16 28 H 0.38 -1.72 8.70 45.56 0.40 -1.32 16 29 H 0.12 -0.09 7.96 -51.93 -0.41 -0.50 16 30 H -0.26 0.05 7.11 56.52 0.40 0.45 16 31 H -0.25 -0.31 7.11 56.52 0.40 0.10 16 32 H 0.14 0.06 8.06 -52.48 -0.42 -0.36 16 33 H 0.10 -0.53 7.67 -51.93 -0.40 -0.93 16 34 H 0.10 -0.54 7.65 -51.93 -0.40 -0.94 16 35 H 0.41 -2.74 8.66 -40.82 -0.35 -3.10 16 36 H 0.12 -0.06 6.38 -52.49 -0.33 -0.40 16 37 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 38 H 0.12 -0.08 8.06 -52.48 -0.42 -0.50 16 39 H 0.12 -0.06 8.06 -52.49 -0.42 -0.48 16 40 H 0.11 -0.05 6.74 -52.49 -0.35 -0.40 16 41 H 0.09 -0.45 8.09 -51.93 -0.42 -0.87 16 42 H 0.11 -0.27 7.88 -51.93 -0.41 -0.68 16 43 H 0.11 0.00 6.09 -51.93 -0.32 -0.32 16 44 H 0.09 0.13 7.30 -51.93 -0.38 -0.25 16 45 H 0.14 -0.75 6.30 -52.49 -0.33 -1.08 16 46 H 0.14 -0.65 4.90 -52.49 -0.26 -0.91 16 LS Contribution 403.01 15.07 6.07 6.07 Total: 0.00 -10.85 403.01 -12.64 -23.49 By element: Atomic # 1 Polarization: -8.51 SS G_CDS: -5.28 Total: -13.79 kcal Atomic # 6 Polarization: -0.15 SS G_CDS: -4.93 Total: -5.07 kcal Atomic # 7 Polarization: 2.23 SS G_CDS: -0.21 Total: 2.03 kcal Atomic # 8 Polarization: -2.39 SS G_CDS: -1.02 Total: -3.42 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.04 Total: -0.28 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: -5.07 Total: -6.69 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -2.26 Total: -2.34 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -10.85 -12.64 -23.49 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12905100_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.099 kcal (2) G-P(sol) polarization free energy of solvation -10.848 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.947 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.643 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.491 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.590 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds